RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 GRIN2DO15399 1336 aa20.07■□□□□ 0.8
USP49-202ENST00000373010 TTLL13PA6NNM8 815 aa20.06■□□□□ 0.8
USP49-202ENST00000373010 EDNRBP24530 442 aa20.06■□□□□ 0.8
USP49-202ENST00000373010 PTGIRP43119 386 aa20.06■□□□□ 0.8
USP49-202ENST00000373010 SKOR1P84550 965 aa20.06■□□□□ 0.8
USP49-202ENST00000373010 LLGL1Q15334 1064 aa20.06■□□□□ 0.8
USP49-202ENST00000373010 LY6KQ17RY6 165 aa20.06■□□□□ 0.8
USP49-202ENST00000373010 SCARA3Q6AZY7 606 aa20.06■□□□□ 0.8
USP49-202ENST00000373010 LRIG3Q6UXM1 1119 aa20.06■□□□□ 0.8
USP49-202ENST00000373010 ATP6V1G3Q96LB4 118 aa20.06■□□□□ 0.8
USP49-202ENST00000373010 CENPHQ9H3R5 247 aa20.06■□□□□ 0.8
USP49-202ENST00000373010 ELP3Q9H9T3 547 aa20.06■□□□□ 0.8
USP49-202ENST00000373010 SNX24Q9Y343 169 aa20.06■□□□□ 0.8
USP49-202ENST00000373010 PCDHA3Q9Y5H8 950 aa20.06■□□□□ 0.8
USP49-202ENST00000373010 A0A0B4J269 797 aa20.06■□□□□ 0.8
USP49-202ENST00000373010 FAM187AA6NFU0 413 aa20.06■□□□□ 0.8
USP49-202ENST00000373010 GGPS1O95749 300 aa20.06■□□□□ 0.8
USP49-202ENST00000373010 CTNNA2P26232 953 aa20.06■□□□□ 0.8
USP49-202ENST00000373010 SSTR3P32745 418 aaPredicted RBP20.06■□□□□ 0.8
USP49-202ENST00000373010 DHX34Q14147 1143 aaKnown RBP20.06■□□□□ 0.8
USP49-202ENST00000373010 SLFN12LQ6IEE8 588 aa20.06■□□□□ 0.8
USP49-202ENST00000373010 OTUD5Q96G74 571 aa20.06■□□□□ 0.8
USP49-202ENST00000373010 TMBIM4Q9HC24 238 aa20.06■□□□□ 0.8
USP49-202ENST00000373010 NRBP2Q9NSY0 501 aa20.06■□□□□ 0.8
USP49-202ENST00000373010 PCDHB2Q9Y5E7 798 aa20.06■□□□□ 0.8
USP49-202ENST00000373010 IRF6O14896 467 aa20.05■□□□□ 0.8
USP49-202ENST00000373010 CFHP08603 1231 aa20.05■□□□□ 0.8
USP49-202ENST00000373010 TCF7P36402 384 aaPredicted RBP20.05■□□□□ 0.8
USP49-202ENST00000373010 RFC5P40937 340 aa20.05■□□□□ 0.8
USP49-202ENST00000373010 ZNF844Q08AG5 666 aa20.05■□□□□ 0.8
USP49-202ENST00000373010 PDCLQ13371 301 aa20.05■□□□□ 0.8
USP49-202ENST00000373010 MCOLN2Q8IZK6 566 aa20.05■□□□□ 0.8
USP49-202ENST00000373010 OR5B17Q8NGF7 314 aa20.05■□□□□ 0.8
USP49-202ENST00000373010 ANAPC7Q9UJX3 599 aa20.05■□□□□ 0.8
USP49-202ENST00000373010 UMODL1Q5DID0 1318 aa20.05■□□□□ 0.8
USP49-202ENST00000373010 KIAA0391O15091 583 aaKnown RBP20.05■□□□□ 0.8
USP49-202ENST00000373010 HSPA6P17066 643 aa20.05■□□□□ 0.8
USP49-202ENST00000373010 ACO1P21399 889 aaKnown RBP20.05■□□□□ 0.8
USP49-202ENST00000373010 SLC13A5Q86YT5 568 aaPredicted RBP20.05■□□□□ 0.8
USP49-202ENST00000373010 CLMNQ96JQ2 1002 aa20.05■□□□□ 0.8
USP49-202ENST00000373010 FMO2Q99518 471 aa20.05■□□□□ 0.8
USP49-202ENST00000373010 ZDHHC18Q9NUE0 388 aa20.05■□□□□ 0.8
USP49-202ENST00000373010 RSPH14Q9UHP6 348 aa20.05■□□□□ 0.8
USP49-202ENST00000373010 PPFIA4O75335 1185 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 RRM1P23921 792 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 MARK3P27448 753 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 CHRNA3P32297 505 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 IRX3P78415 501 aaPredicted RBP20.04■□□□□ 0.8
USP49-202ENST00000373010 CYFIP2Q96F07 1278 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 FAM81BQ96LP2 452 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.04■□□□□ 0.8
USP49-202ENST00000373010 ADGRA2Q96PE1 1338 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 CNTNAP2Q9UHC6 1331 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 PAPPA2Q9BXP8 1791 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 EIF3HO15372 352 aaKnown RBP eCLIP20.04■□□□□ 0.8
USP49-202ENST00000373010 ADCY3O60266 1144 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 ARIH2O95376 493 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 PGK2P07205 417 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 RARAP10276 462 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 NR1D1P20393 614 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 SCP2P22307 547 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 MAPK4P31152 587 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 RWDD2BP57060 319 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 MTMR3Q13615 1198 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 CUL2Q13617 745 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 NEDD9Q14511 834 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 FAM160B1Q5W0V3 765 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 KDM7AQ6ZMT4 941 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 CCDC125Q86Z20 511 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 PRPF31Q8WWY3 499 aaKnown RBP20.04■□□□□ 0.8
USP49-202ENST00000373010 KCNN1Q92952 543 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 CGRRF1Q99675 332 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 ATP8A1Q9Y2Q0 1164 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 PCDHB4Q9Y5E5 795 aa20.04■□□□□ 0.8
USP49-202ENST00000373010 MROH7Q68CQ1 1323 aa20.03■□□□□ 0.8
USP49-202ENST00000373010 GOLGA6L10A6NI86 522 aa20.03■□□□□ 0.8
USP49-202ENST00000373010 MYO1FO00160 1098 aa20.03■□□□□ 0.8
USP49-202ENST00000373010 CNMDO75829 334 aa20.03■□□□□ 0.8
USP49-202ENST00000373010 LDHAP00338 332 aaKnown RBP20.03■□□□□ 0.8
USP49-202ENST00000373010 PLTPP55058 493 aa20.03■□□□□ 0.8
USP49-202ENST00000373010 SIX1Q15475 284 aaPredicted RBP20.03■□□□□ 0.8
USP49-202ENST00000373010 CCDC137Q6PK04 289 aaKnown RBP20.03■□□□□ 0.8
USP49-202ENST00000373010 TMEM270Q6UE05 265 aa20.03■□□□□ 0.8
USP49-202ENST00000373010 MOB2Q70IA6 237 aa20.03■□□□□ 0.8
USP49-202ENST00000373010 ZBTB33Q86T24 672 aa20.03■□□□□ 0.8
USP49-202ENST00000373010 TRIM50Q86XT4 487 aa20.03■□□□□ 0.8
USP49-202ENST00000373010 PASD1Q8IV76 773 aa20.03■□□□□ 0.8
USP49-202ENST00000373010 SEPT1Q8WYJ6 367 aa20.03■□□□□ 0.8
USP49-202ENST00000373010 DCPSQ96C86 337 aaKnown RBP20.03■□□□□ 0.8
USP49-202ENST00000373010 ASCC2Q9H1I8 757 aaPredicted RBP20.03■□□□□ 0.8
USP49-202ENST00000373010 TMEM134Q9H6X4 195 aa20.03■□□□□ 0.8
USP49-202ENST00000373010 LRRC4CQ9HCJ2 640 aa20.03■□□□□ 0.8
USP49-202ENST00000373010 RASAL2Q9UJF2 1139 aa20.03■□□□□ 0.8
USP49-202ENST00000373010 LRRC37A2A6NM11 1700 aa20.03■□□□□ 0.8
USP49-202ENST00000373010 HMGB1P1B2RPK0 211 aaPredicted RBP20.03■□□□□ 0.8
USP49-202ENST00000373010 MAFO75444 373 aaPredicted RBP20.03■□□□□ 0.8
USP49-202ENST00000373010 MYZAPP0CAP1 466 aa20.03■□□□□ 0.8
USP49-202ENST00000373010 TNFSF9P41273 254 aa20.03■□□□□ 0.8
USP49-202ENST00000373010 ZDHHC24Q6UX98 284 aa20.03■□□□□ 0.8
USP49-202ENST00000373010 SULF1Q8IWU6 871 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms