RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 CERKLQ49MI3 558 aaPredicted RBP14.59□□□□□ -0.07
USP49-201ENST00000373006 C12orf50Q8NA57 414 aaPredicted RBP14.59□□□□□ -0.07
USP49-201ENST00000373006 C7orf43Q8WVR3 580 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 CCDC127Q96BQ5 260 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 ANAPC7Q9UJX3 599 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 PHTF1Q9UMS5 762 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 TNRC6CQ9HCJ0 1690 aaKnown RBP14.58□□□□□ -0.07
USP49-201ENST00000373006 COL14A1Q05707 1796 aaKnown RBP14.58□□□□□ -0.08
USP49-201ENST00000373006 GAS7O60861 476 aa14.58□□□□□ -0.08
USP49-201ENST00000373006 CDH16O75309 829 aa14.58□□□□□ -0.08
USP49-201ENST00000373006 EPHB2P29323 1055 aa14.58□□□□□ -0.08
USP49-201ENST00000373006 CIITAP33076 1130 aa14.58□□□□□ -0.08
USP49-201ENST00000373006 MXRA7P84157 204 aa14.58□□□□□ -0.08
USP49-201ENST00000373006 C1orf220Q5T0J3 134 aa14.58□□□□□ -0.08
USP49-201ENST00000373006 FAM13CQ8NE31 585 aa14.58□□□□□ -0.08
USP49-201ENST00000373006 DHX38Q92620 1227 aaKnown RBP14.58□□□□□ -0.08
USP49-201ENST00000373006 NUDCD1Q96RS6 583 aa14.58□□□□□ -0.08
USP49-201ENST00000373006 PIDD1Q9HB75 910 aa14.58□□□□□ -0.08
USP49-201ENST00000373006 TXLNGQ9NUQ3 528 aa14.58□□□□□ -0.08
USP49-201ENST00000373006 DPPA5A6NC42 116 aa14.58□□□□□ -0.08
USP49-201ENST00000373006 POC1B-GALNT4F8VUJ3 575 aa14.58□□□□□ -0.08
USP49-201ENST00000373006 ENTPD5O75356 428 aa14.58□□□□□ -0.08
USP49-201ENST00000373006 SERPINB2P05120 415 aa14.58□□□□□ -0.08
USP49-201ENST00000373006 CTCFP49711 727 aaPredicted RBP14.58□□□□□ -0.08
USP49-201ENST00000373006 MKRN3Q13064 507 aaKnown RBP14.58□□□□□ -0.08
USP49-201ENST00000373006 LONP2Q86WA8 852 aa14.58□□□□□ -0.08
USP49-201ENST00000373006 DAW1Q8N136 415 aa14.58□□□□□ -0.08
USP49-201ENST00000373006 C4orf33Q8N1A6 199 aa14.58□□□□□ -0.08
USP49-201ENST00000373006 TTC8Q8TAM2 541 aa14.58□□□□□ -0.08
USP49-201ENST00000373006 TSC22D3Q99576 134 aa14.58□□□□□ -0.08
USP49-201ENST00000373006 RNPEPL1Q9HAU8 725 aa14.58□□□□□ -0.08
USP49-201ENST00000373006 ZFATQ9P243 1243 aa14.58□□□□□ -0.08
USP49-201ENST00000373006 STK24Q9Y6E0 443 aa14.58□□□□□ -0.08
USP49-201ENST00000373006 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.58□□□□□ -0.08
USP49-201ENST00000373006 KLHL33A6NCF5 533 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 FAM47DPA6NHR8 397 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 PEX11AO75192 247 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 GAS8O95995 478 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 CYP1A2P05177 515 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 GZMAP12544 262 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 GNAZP19086 355 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 CALB2P22676 271 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 MAPK4P31152 587 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 RC3H1Q5TC82 1133 aaKnown RBP14.57□□□□□ -0.08
USP49-201ENST00000373006 MORC4Q8TE76 937 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 TRAIPQ9BWF2 469 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 TMEM117Q9H0C3 514 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 TUFT1Q9NNX1 390 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 LRRC4BQ9NT99 713 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 ARHGEF35A5YM69 484 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 PSMD10O75832 226 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 CYP11B1P15538 503 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 RFX1P22670 979 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 GJC1P36383 396 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 ERFP50548 548 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 POLGP54098 1239 aaPredicted RBP14.57□□□□□ -0.08
USP49-201ENST00000373006 ICA1Q05084 483 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 TCEAL1Q15170 157 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 SLC30A9Q6PML9 568 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 PPP1R21Q6ZMI0 780 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 FAM71AQ8IYT1 594 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 SUPT20HQ8NEM7 779 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 DCAF4Q8WV16 495 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 SEMA4DQ92854 862 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 FAM84AQ96KN4 292 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 NACC1Q96RE7 527 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 TBC1D10AQ9BXI6 508 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 ZC3H12CQ9C0D7 883 aaKnown RBP14.57□□□□□ -0.08
USP49-201ENST00000373006 ZNF219Q9P2Y4 722 aaPredicted RBP14.57□□□□□ -0.08
USP49-201ENST00000373006 GTF3C4Q9UKN8 822 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 DDTLA6NHG4 134 aaPredicted RBP14.57□□□□□ -0.08
USP49-201ENST00000373006 MTA2O94776 668 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 BMP3P12645 472 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 MXI1P50539 228 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 TUBP50607 506 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 C11orf91Q3C1V1 193 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 ANO7Q6IWH7 933 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 KCNQ5Q9NR82 932 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 SEL1LQ9UBV2 794 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 GRID1Q9ULK0 1009 aa14.57□□□□□ -0.08
USP49-201ENST00000373006 A6NHS1 94 aa14.56□□□□□ -0.08
USP49-201ENST00000373006 NDUFB10O96000 172 aa14.56□□□□□ -0.08
USP49-201ENST00000373006 TPBGLP0DKB5 382 aa14.56□□□□□ -0.08
USP49-201ENST00000373006 ATP4AP20648 1035 aa14.56□□□□□ -0.08
USP49-201ENST00000373006 SKIV2L2P42285 1042 aaKnown RBP14.56□□□□□ -0.08
USP49-201ENST00000373006 PTK6Q13882 451 aa14.56□□□□□ -0.08
USP49-201ENST00000373006 ANKRD35Q8N283 1001 aa14.56□□□□□ -0.08
USP49-201ENST00000373006 CCDC77Q9BR77 488 aa14.56□□□□□ -0.08
USP49-201ENST00000373006 LXNQ9BS40 222 aa14.56□□□□□ -0.08
USP49-201ENST00000373006 PLVAPQ9BX97 442 aa14.56□□□□□ -0.08
USP49-201ENST00000373006 DCLK3Q9C098 648 aa14.56□□□□□ -0.08
USP49-201ENST00000373006 LRMDAQ9H2I8 198 aa14.56□□□□□ -0.08
USP49-201ENST00000373006 LUC7L3O95232 432 aaKnown RBP14.56□□□□□ -0.08
USP49-201ENST00000373006 T-ENOLP0DO92 83 aa14.56□□□□□ -0.08
USP49-201ENST00000373006 ARP10275 920 aa14.56□□□□□ -0.08
USP49-201ENST00000373006 RALAP11233 206 aa14.56□□□□□ -0.08
USP49-201ENST00000373006 CCNG1P51959 295 aa14.56□□□□□ -0.08
USP49-201ENST00000373006 ACVR2BQ13705 512 aa14.56□□□□□ -0.08
USP49-201ENST00000373006 IZUMO3Q5VZ72 239 aa14.56□□□□□ -0.08
USP49-201ENST00000373006 ZNF365Q70YC5 407 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms