RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 CCDC22O60826 627 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 FGFR4P22455 802 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 ITGA6P23229 1130 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 ZNF132P52740 706 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 VCPP55072 806 aaKnown RBP11.28□□□□□ -0.6
TRERF1-203ENST00000372917 IRF5Q13568 498 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 CGB2Q6NT52 195 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 EIF1ADQ8N9N8 165 aaKnown RBP11.28□□□□□ -0.6
TRERF1-203ENST00000372917 OR6Y1Q8NGX8 325 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 CAPSLQ8WWF8 208 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 CKAP2Q8WWK9 683 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 IFT122Q9HBG6 1241 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 FAM207AQ9NSI2 230 aaPredicted RBP11.28□□□□□ -0.6
TRERF1-203ENST00000372917 RWDD2AQ9UIY3 292 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 PDS5AQ29RF7 1337 aaKnown RBP11.28□□□□□ -0.6
TRERF1-203ENST00000372917 ANKARQ7Z5J8 1434 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 RFC1P35251 1148 aaPredicted RBP11.28□□□□□ -0.6
TRERF1-203ENST00000372917 CLK3P49761 638 aaKnown RBP11.28□□□□□ -0.6
TRERF1-203ENST00000372917 DNAJC3Q13217 504 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 LRRC24Q50LG9 513 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 SPOPLQ6IQ16 392 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 ADAT2Q7Z6V5 191 aaKnown RBP11.28□□□□□ -0.6
TRERF1-203ENST00000372917 PAF1Q8N7H5 531 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 HPS1Q92902 700 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 ACAP3Q96P50 834 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 WDR6Q9NNW5 1121 aaKnown RBP11.28□□□□□ -0.6
TRERF1-203ENST00000372917 AK5Q9Y6K8 562 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 SCINQ9Y6U3 715 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 hCG_1642624A0A1W2PR95 340 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 ITGA4P13612 1032 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 CES1P23141 567 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 AP2B1P63010 937 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 STK11Q15831 433 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 LONRF1Q17RB8 773 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 OGFOD2Q6N063 350 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 PASD1Q8IV76 773 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 NATD1Q8N6N6 113 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 C7orf57Q8NEG2 295 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 GSDMAQ96QA5 445 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 FERD3LQ96RJ6 166 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 TANGO6Q9C0B7 1094 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 GOLPH3Q9H4A6 298 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 ARHGAP20Q9P2F6 1191 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 KCNJ14Q9UNX9 436 aa11.28□□□□□ -0.6
TRERF1-203ENST00000372917 COL15A1P39059 1388 aa11.27□□□□□ -0.6
TRERF1-203ENST00000372917 PALLDQ8WX93 1383 aa11.27□□□□□ -0.6
TRERF1-203ENST00000372917 FMN2Q9NZ56 1722 aa11.27□□□□□ -0.6
TRERF1-203ENST00000372917 N4BP2Q86UW6 1770 aaPredicted RBP11.27□□□□□ -0.6
TRERF1-203ENST00000372917 C15orf38-AP3S2A0A0A6YYH1 394 aa11.27□□□□□ -0.6
TRERF1-203ENST00000372917 A0A1W2PQC6 194 aa11.27□□□□□ -0.6
TRERF1-203ENST00000372917 BRAFP15056 766 aa11.27□□□□□ -0.6
TRERF1-203ENST00000372917 LMNB2Q03252 620 aa11.27□□□□□ -0.6
TRERF1-203ENST00000372917 PDAP1Q13442 181 aaKnown RBP11.27□□□□□ -0.6
TRERF1-203ENST00000372917 PHKG1Q16816 387 aa11.27□□□□□ -0.6
TRERF1-203ENST00000372917 RABL6Q3YEC7 729 aaPredicted RBP11.27□□□□□ -0.6
TRERF1-203ENST00000372917 SLC27A3Q5K4L6 730 aa11.27□□□□□ -0.6
TRERF1-203ENST00000372917 UNC13DQ70J99 1090 aa11.27□□□□□ -0.6
TRERF1-203ENST00000372917 ARPINQ7Z6K5 226 aa11.27□□□□□ -0.6
TRERF1-203ENST00000372917 C12orf50Q8NA57 414 aaPredicted RBP11.27□□□□□ -0.6
TRERF1-203ENST00000372917 GRAMD1AQ96CP6 724 aa11.27□□□□□ -0.6
TRERF1-203ENST00000372917 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.27□□□□□ -0.6
TRERF1-203ENST00000372917 MMRN2Q9H8L6 949 aa11.27□□□□□ -0.6
TRERF1-203ENST00000372917 AIPL1Q9NZN9 384 aa11.27□□□□□ -0.6
TRERF1-203ENST00000372917 TRMT112Q9UI30 125 aaKnown RBP11.27□□□□□ -0.6
TRERF1-203ENST00000372917 SNX9Q9Y5X1 595 aa11.27□□□□□ -0.6
TRERF1-203ENST00000372917 LRRC37A3O60309 1634 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 GPAA1O43292 621 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 CRYZL1O95825 349 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 MYBP10242 640 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 NR4A1P22736 598 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 IST1P53990 364 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 MRPS9P82933 396 aaKnown RBP11.27□□□□□ -0.61
TRERF1-203ENST00000372917 DLG1Q12959 904 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 MKRN3Q13064 507 aaKnown RBP11.27□□□□□ -0.61
TRERF1-203ENST00000372917 KRT81Q14533 505 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 EGFLAMQ63HQ2 1017 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 IYDQ6PHW0 289 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 C4orf22Q6V702 233 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 MAMSTRQ6ZN01 415 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 DCDC5Q6ZRR9 648 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 MFSD6Q6ZSS7 791 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 RRAGAQ7L523 313 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 KIAA2013Q8IYS2 634 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 EME1Q96AY2 570 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 EPB41L1Q9H4G0 881 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 MARCH7Q9H992 704 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 ZFYVE28Q9HCC9 887 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 KLRF2D3W0D1 207 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 CDK2AP1O14519 115 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 GSC2O15499 205 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 SLIT1O75093 1534 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 CIB2O75838 187 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 VCLP18206 1134 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 PGM1P36871 562 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 STAT2P52630 851 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 SLC5A3P53794 718 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 ZBTB16Q05516 673 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 CYP4V2Q6ZWL3 525 aaPredicted RBP11.27□□□□□ -0.61
TRERF1-203ENST00000372917 RAPH1Q70E73 1250 aa11.27□□□□□ -0.61
TRERF1-203ENST00000372917 BTBD10Q9BSF8 475 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms