RNA–Protein interactions for RNA: ENST00000372616.1

CTPS1-201, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTPS1, Length 2,037 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-201ENST00000372616 FAM228BP0C875 321 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 FCER1AP12319 257 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 ETFBP38117 255 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 RASSF2P50749 326 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 PMS2P54278 862 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 SH3BGRP55822 239 aaPredicted RBP7.71□□□□□ -1.17
CTPS1-201ENST00000372616 MRPS35P82673 323 aaKnown RBP7.71□□□□□ -1.17
CTPS1-201ENST00000372616 GABPAQ06546 454 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 KCNMA1Q12791 1236 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 ZRSR2Q15696 482 aaKnown RBP7.71□□□□□ -1.17
CTPS1-201ENST00000372616 PDCD2Q16342 344 aaPredicted RBP7.71□□□□□ -1.17
CTPS1-201ENST00000372616 MFSD5Q6N075 450 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 GPC2Q8N158 579 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 LRRC57Q8N9N7 239 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 NEDD1Q8NHV4 660 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 SNX29Q8TEQ0 813 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 SH3TC2Q8TF17 1288 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 FAM151AQ8WW52 585 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 RAD54LQ92698 747 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 ERP44Q9BS26 406 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 SPON2Q9BUD6 331 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 TXLNGYQ9BZA5 131 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 TMEM60Q9H2L4 133 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 CHRDQ9H2X0 955 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 TDRD3Q9H7E2 651 aaKnown RBP7.71□□□□□ -1.17
CTPS1-201ENST00000372616 METTL14Q9HCE5 456 aaKnown RBP7.71□□□□□ -1.17
CTPS1-201ENST00000372616 MYOZ2Q9NPC6 264 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 DDX4Q9NQI0 724 aaKnown RBP7.71□□□□□ -1.17
CTPS1-201ENST00000372616 SEC63Q9UGP8 760 aaKnown RBP7.71□□□□□ -1.17
CTPS1-201ENST00000372616 ADAMTS1Q9UHI8 967 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 SYNGAP1Q96PV0 1343 aa7.71□□□□□ -1.17
CTPS1-201ENST00000372616 CCDC85CA6NKD9 419 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 PP2D1A8MPX8 630 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 PHF20L1A8MW92 1017 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 TRAF5O00463 557 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 DAPK3O43293 454 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 HIP1RO75146 1068 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 SMNDC1O75940 238 aaKnown RBP eCLIP7.71□□□□□ -1.18
CTPS1-201ENST00000372616 LMNAP02545 664 aaKnown RBP7.71□□□□□ -1.18
CTPS1-201ENST00000372616 FESP07332 822 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 VIMP08670 466 aaKnown RBP7.71□□□□□ -1.18
CTPS1-201ENST00000372616 RPSAP08865 295 aaKnown RBP7.71□□□□□ -1.18
CTPS1-201ENST00000372616 CHN1P15882 459 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 FERP16591 822 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 DR1Q01658 176 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 BLMHQ13867 455 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 GRM2Q14416 872 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 ZCWPW2Q504Y3 356 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 ALKBH5Q6P6C2 394 aaKnown RBP7.71□□□□□ -1.18
CTPS1-201ENST00000372616 CEP128Q6ZU80 1094 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 HEATR3Q7Z4Q2 680 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 APBB1IPQ7Z5R6 666 aaPredicted RBP7.71□□□□□ -1.18
CTPS1-201ENST00000372616 FRMD5Q7Z6J6 570 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 EGFL6Q8IUX8 553 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 TRIM59Q8IWR1 403 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 MORC4Q8TE76 937 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 ZNF483Q8TF39 744 aaPredicted RBP7.71□□□□□ -1.18
CTPS1-201ENST00000372616 DYDC1Q8WWB3 177 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 KLHL29Q96CT2 875 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 DYNLL2Q96FJ2 89 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 HES6Q96HZ4 224 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 ZBED3Q96IU2 234 aaPredicted RBP7.71□□□□□ -1.18
CTPS1-201ENST00000372616 SELENOSQ9BQE4 189 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 GRIP2Q9C0E4 1043 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 NLRC4Q9NPP4 1024 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 TXLNGQ9NUQ3 528 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 ZNF70Q9UC06 446 aaPredicted RBP7.71□□□□□ -1.18
CTPS1-201ENST00000372616 HERC5Q9UII4 1024 aaKnown RBP7.71□□□□□ -1.18
CTPS1-201ENST00000372616 NAGPAQ9UK23 515 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 ARL2BPQ9Y2Y0 163 aa7.71□□□□□ -1.18
CTPS1-201ENST00000372616 GTPBP10A4D1E9 387 aaKnown RBP7.7□□□□□ -1.18
CTPS1-201ENST00000372616 MIF4GDA9UHW6 222 aaKnown RBP7.7□□□□□ -1.18
CTPS1-201ENST00000372616 HNRNPCL1O60812 293 aaKnown RBP7.7□□□□□ -1.18
CTPS1-201ENST00000372616 NOL4O94818 638 aa7.7□□□□□ -1.18
CTPS1-201ENST00000372616 CHRNA3P32297 505 aa7.7□□□□□ -1.18
CTPS1-201ENST00000372616 NAPAP54920 295 aa7.7□□□□□ -1.18
CTPS1-201ENST00000372616 C1QTNF8P60827 252 aa7.7□□□□□ -1.18
CTPS1-201ENST00000372616 MRPS25P82663 173 aaKnown RBP7.7□□□□□ -1.18
CTPS1-201ENST00000372616 NFIAQ12857 509 aa7.7□□□□□ -1.18
CTPS1-201ENST00000372616 TRAF1Q13077 416 aa7.7□□□□□ -1.18
CTPS1-201ENST00000372616 CALCRLQ16602 461 aa7.7□□□□□ -1.18
CTPS1-201ENST00000372616 LETM2Q2VYF4 491 aa7.7□□□□□ -1.18
CTPS1-201ENST00000372616 FAM47AQ5JRC9 791 aa7.7□□□□□ -1.18
CTPS1-201ENST00000372616 SPDYAQ5MJ70 313 aa7.7□□□□□ -1.18
CTPS1-201ENST00000372616 FAM26FQ5R3K3 315 aa7.7□□□□□ -1.18
CTPS1-201ENST00000372616 CDCA2Q69YH5 1023 aaPredicted RBP7.7□□□□□ -1.18
CTPS1-201ENST00000372616 PRICKLE2Q7Z3G6 844 aa7.7□□□□□ -1.18
CTPS1-201ENST00000372616 BTLAQ7Z6A9 289 aa7.7□□□□□ -1.18
CTPS1-201ENST00000372616 ZC3H3Q8IXZ2 948 aaKnown RBP7.7□□□□□ -1.18
CTPS1-201ENST00000372616 METTL13Q8N6R0 699 aa7.7□□□□□ -1.18
CTPS1-201ENST00000372616 MICAL1Q8TDZ2 1067 aa7.7□□□□□ -1.18
CTPS1-201ENST00000372616 DDX47Q9H0S4 455 aaKnown RBP7.7□□□□□ -1.18
CTPS1-201ENST00000372616 RXFP1Q9HBX9 757 aa7.7□□□□□ -1.18
CTPS1-201ENST00000372616 KANSL3Q9P2N6 904 aa7.7□□□□□ -1.18
CTPS1-201ENST00000372616 CNOT8Q9UFF9 292 aaKnown RBP7.7□□□□□ -1.18
CTPS1-201ENST00000372616 EFR3BQ9Y2G0 817 aa7.7□□□□□ -1.18
CTPS1-201ENST00000372616 PFASO15067 1338 aa7.69□□□□□ -1.18
CTPS1-201ENST00000372616 GRIN3BO60391 1043 aa7.69□□□□□ -1.18
CTPS1-201ENST00000372616 SNX3O60493 162 aa7.69□□□□□ -1.18
CTPS1-201ENST00000372616 TLR2O60603 784 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms