RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 MUC3BQ9H195 1237 aa10.35□□□□□ -0.75
COL4A6-202ENST00000372216 CACNA2D2Q9NY47 1150 aa10.35□□□□□ -0.75
COL4A6-202ENST00000372216 CYBBP04839 570 aa10.35□□□□□ -0.75
COL4A6-202ENST00000372216 EEF1DP29692 281 aaKnown RBP10.35□□□□□ -0.75
COL4A6-202ENST00000372216 FLOT2Q14254 428 aa10.35□□□□□ -0.75
COL4A6-202ENST00000372216 ARID5BQ14865 1188 aa10.35□□□□□ -0.75
COL4A6-202ENST00000372216 CNTNAP5Q8WYK1 1306 aa10.35□□□□□ -0.75
COL4A6-202ENST00000372216 DCCP43146 1447 aa10.35□□□□□ -0.75
COL4A6-202ENST00000372216 PODXLO00592 558 aa10.35□□□□□ -0.75
COL4A6-202ENST00000372216 NPTXRO95502 500 aa10.35□□□□□ -0.75
COL4A6-202ENST00000372216 CUL1Q13616 776 aa10.35□□□□□ -0.75
COL4A6-202ENST00000372216 RFX8Q6ZV50 586 aa10.35□□□□□ -0.75
COL4A6-202ENST00000372216 BCAS4Q8TDM0 211 aa10.35□□□□□ -0.75
COL4A6-202ENST00000372216 SCFD2Q8WU76 684 aa10.35□□□□□ -0.75
COL4A6-202ENST00000372216 AGPAT1Q99943 283 aa10.35□□□□□ -0.75
COL4A6-202ENST00000372216 KLHL11Q9NVR0 708 aa10.35□□□□□ -0.75
COL4A6-202ENST00000372216 CDV3Q9UKY7 258 aaKnown RBP10.35□□□□□ -0.75
COL4A6-202ENST00000372216 A0A1B0GUA9 196 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 ARHGAP10A1A4S6 786 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 CAPZA2P47755 286 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 OR1G1P47890 313 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 ANTXR2P58335 489 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 ST8SIA6P61647 398 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 LRRC74AQ0VAA2 488 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 PLEKHH3Q7Z736 793 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 CDKL3Q8IVW4 592 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-202ENST00000372216 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.34□□□□□ -0.75
COL4A6-202ENST00000372216 ASAP2O43150 1006 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 PDGFRBP09619 1106 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 ATN1P54259 1190 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-202ENST00000372216 TAP1Q03518 808 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 KCNB1Q14721 858 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 LRRC23Q53EV4 343 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-202ENST00000372216 CATSPER3Q86XQ3 398 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 SH3TC2Q8TF17 1288 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 NFU1Q9UMS0 254 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 L3MBTL1Q9Y468 752 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 KIAA1210Q9ULL0 1709 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 APOL1O14791 398 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 NCK2O43639 380 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 HBP1O60381 514 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 ICAM1P05362 532 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 SETSIPP0DME0 302 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 AKT1P31749 480 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 NLRP11P59045 1033 aaKnown RBP10.34□□□□□ -0.75
COL4A6-202ENST00000372216 GTF2H3Q13889 308 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 ITPRIPL1Q6GPH6 555 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 SARM1Q6SZW1 724 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 CCNYL1Q8N7R7 359 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 MAGEB5Q9BZ81 275 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 CCDC90BQ9GZT6 254 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 KCNH7Q9NS40 1196 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 KIF20BQ96Q89 1820 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 SPTLC1O15269 473 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 SLC26A4O43511 780 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 CD4P01730 458 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 RGS7P49802 495 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 PDXDC1Q6P996 788 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 CCDC197Q8NCU1 140 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 CCDC124Q96CT7 223 aaKnown RBP10.34□□□□□ -0.75
COL4A6-202ENST00000372216 DRC3Q9H069 523 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 UNC45AQ9H3U1 944 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 SLC38A7Q9NVC3 462 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 SNX24Q9Y343 169 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 RRN3P2A6NIE6 340 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 ATP9BO43861 1147 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 IL18RAPO95256 599 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 ZNF235Q14590 738 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 SNX17Q15036 470 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 NUDT18Q6ZVK8 323 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 HS6ST3Q8IZP7 471 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 KCND2Q9NZV8 630 aa10.34□□□□□ -0.75
COL4A6-202ENST00000372216 NOVA2Q9UNW9 492 aaKnown RBP10.34□□□□□ -0.75
COL4A6-202ENST00000372216 MST1RQ04912 1400 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 TMCC1O94876 653 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 SV2CQ496J9 727 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 DCUN1D1Q96GG9 259 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 TRPV6Q9H1D0 765 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 SPAG7O75391 227 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 ETFBP38117 255 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 NCOA4Q13772 614 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 SNRNP35Q16560 246 aaKnown RBP10.33□□□□□ -0.76
COL4A6-202ENST00000372216 ZDHHC15Q96MV8 337 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 C7orf25Q9BPX7 421 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 GBA2Q9HCG7 927 aaPredicted RBP10.33□□□□□ -0.76
COL4A6-202ENST00000372216 ENTPD7Q9NQZ7 604 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 LSM7Q9UK45 103 aaKnown RBP10.33□□□□□ -0.76
COL4A6-202ENST00000372216 CCDC188H7C350 402 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 TEX33O43247 280 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 ALDH1A1P00352 501 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 CDH6P55285 790 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 RPS6P62753 249 aaKnown RBP10.33□□□□□ -0.76
COL4A6-202ENST00000372216 NNTQ13423 1086 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 PCSK7Q16549 785 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 NBPF20Q3BBV1 942 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 MGAT5BQ3V5L5 792 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 KRT80Q6KB66 452 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 GLB1LQ6UWU2 654 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 WNT8AQ9H1J5 351 aa10.33□□□□□ -0.76
COL4A6-202ENST00000372216 TRAF3IP3Q9Y228 551 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms