RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 RBAKQ9NYW8 714 aaPredicted RBP30.97■■■□□ 2.55
SSBP3-204ENST00000371320 PODXLO00592 558 aa30.97■■■□□ 2.55
SSBP3-204ENST00000371320 PEX10O60683 326 aa30.97■■■□□ 2.55
SSBP3-204ENST00000371320 MAPK4P31152 587 aa30.97■■■□□ 2.55
SSBP3-204ENST00000371320 PLTPP55058 493 aa30.97■■■□□ 2.55
SSBP3-204ENST00000371320 SPDYCQ5MJ68 293 aa30.97■■■□□ 2.55
SSBP3-204ENST00000371320 TREML2Q5T2D2 321 aa30.97■■■□□ 2.55
SSBP3-204ENST00000371320 LBX2Q6XYB7 198 aa30.97■■■□□ 2.55
SSBP3-204ENST00000371320 MCOLN2Q8IZK6 566 aa30.97■■■□□ 2.55
SSBP3-204ENST00000371320 ANAPC7Q9UJX3 599 aa30.97■■■□□ 2.55
SSBP3-204ENST00000371320 TCRBV7S2A1N4TA0A589 114 aa30.96■■■□□ 2.55
SSBP3-204ENST00000371320 ZEB2O60315 1214 aa30.96■■■□□ 2.55
SSBP3-204ENST00000371320 CCT5P48643 541 aa30.96■■■□□ 2.55
SSBP3-204ENST00000371320 GUCY1A3Q02108 690 aa30.96■■■□□ 2.55
SSBP3-204ENST00000371320 MSTO1Q9BUK6 570 aa30.96■■■□□ 2.55
SSBP3-204ENST00000371320 TARS2Q9BW92 718 aaKnown RBP30.96■■■□□ 2.55
SSBP3-204ENST00000371320 FBXO40Q9UH90 709 aa30.96■■■□□ 2.55
SSBP3-204ENST00000371320 LCTP09848 1927 aa30.96■■■□□ 2.55
SSBP3-204ENST00000371320 IGKV6D-21A0A0A0MT36 114 aa30.96■■■□□ 2.55
SSBP3-204ENST00000371320 LDHAP00338 332 aaKnown RBP30.96■■■□□ 2.55
SSBP3-204ENST00000371320 UBA1P22314 1058 aaKnown RBP30.96■■■□□ 2.55
SSBP3-204ENST00000371320 HPDP32754 393 aaPredicted RBP30.96■■■□□ 2.55
SSBP3-204ENST00000371320 CYP1B1Q16678 543 aa30.96■■■□□ 2.55
SSBP3-204ENST00000371320 CPA5Q8WXQ8 436 aa30.96■■■□□ 2.55
SSBP3-204ENST00000371320 CEP89Q96ST8 783 aa30.96■■■□□ 2.55
SSBP3-204ENST00000371320 ANKFY1Q9P2R3 1169 aa30.96■■■□□ 2.55
SSBP3-204ENST00000371320 SNCAIPQ9Y6H5 919 aa30.96■■■□□ 2.55
SSBP3-204ENST00000371320 PTPRJQ12913 1337 aa30.95■■■□□ 2.55
SSBP3-204ENST00000371320 MYO1CO00159 1063 aa30.95■■■□□ 2.55
SSBP3-204ENST00000371320 VGLL4Q14135 290 aa30.95■■■□□ 2.55
SSBP3-204ENST00000371320 SPOPLQ6IQ16 392 aa30.95■■■□□ 2.55
SSBP3-204ENST00000371320 ARFGAP2Q8N6H7 521 aa30.95■■■□□ 2.55
SSBP3-204ENST00000371320 AVENQ9NQS1 362 aaPredicted RBP30.95■■■□□ 2.55
SSBP3-204ENST00000371320 BCCIPQ9P287 314 aaKnown RBP eCLIP30.95■■■□□ 2.55
SSBP3-204ENST00000371320 VNN1O95497 513 aa30.94■■■□□ 2.54
SSBP3-204ENST00000371320 MYBL1P10243 752 aa30.94■■■□□ 2.54
SSBP3-204ENST00000371320 COILP38432 576 aaPredicted RBP30.94■■■□□ 2.54
SSBP3-204ENST00000371320 RFC5P40937 340 aa30.94■■■□□ 2.54
SSBP3-204ENST00000371320 ZDHHC24Q6UX98 284 aa30.94■■■□□ 2.54
SSBP3-204ENST00000371320 TRIM11Q96F44 468 aa30.94■■■□□ 2.54
SSBP3-204ENST00000371320 RUNDC3BQ96NL0 473 aa30.94■■■□□ 2.54
SSBP3-204ENST00000371320 PLVAPQ9BX97 442 aa30.94■■■□□ 2.54
SSBP3-204ENST00000371320 NRBP2Q9NSY0 501 aa30.94■■■□□ 2.54
SSBP3-204ENST00000371320 BTBD7Q9P203 1132 aa30.94■■■□□ 2.54
SSBP3-204ENST00000371320 GSTTP1A0A1W2PQM5 241 aa30.94■■■□□ 2.54
SSBP3-204ENST00000371320 RARAP10276 462 aa30.94■■■□□ 2.54
SSBP3-204ENST00000371320 GBP1P32455 592 aa30.94■■■□□ 2.54
SSBP3-204ENST00000371320 LSP1P33241 339 aa30.94■■■□□ 2.54
SSBP3-204ENST00000371320 AGBL2Q5U5Z8 902 aa30.94■■■□□ 2.54
SSBP3-204ENST00000371320 CCDC105Q8IYK2 499 aa30.94■■■□□ 2.54
SSBP3-204ENST00000371320 FBXO25Q8TCJ0 367 aa30.94■■■□□ 2.54
SSBP3-204ENST00000371320 A0A0B4J269 797 aa30.93■■■□□ 2.54
SSBP3-204ENST00000371320 FARP2O94887 1054 aaPredicted RBP30.93■■■□□ 2.54
SSBP3-204ENST00000371320 MDH1P40925 334 aaKnown RBP30.93■■■□□ 2.54
SSBP3-204ENST00000371320 NSFP46459 744 aaKnown RBP30.93■■■□□ 2.54
SSBP3-204ENST00000371320 IFFO1Q0D2I5 559 aa30.93■■■□□ 2.54
SSBP3-204ENST00000371320 ZBTB41Q5SVQ8 909 aa30.93■■■□□ 2.54
SSBP3-204ENST00000371320 RIOX2Q8IUF8 465 aa30.93■■■□□ 2.54
SSBP3-204ENST00000371320 GPC2Q8N158 579 aa30.93■■■□□ 2.54
SSBP3-204ENST00000371320 PCYT2Q99447 389 aa30.93■■■□□ 2.54
SSBP3-204ENST00000371320 GRHL1Q9NZI5 618 aa30.93■■■□□ 2.54
SSBP3-204ENST00000371320 ZNFX1Q9P2E3 1918 aaKnown RBP30.93■■■□□ 2.54
SSBP3-204ENST00000371320 RPL21P46778 160 aaKnown RBP30.93■■■□□ 2.54
SSBP3-204ENST00000371320 EIF3BP55884 814 aaKnown RBP30.93■■■□□ 2.54
SSBP3-204ENST00000371320 CUL2Q13617 745 aa30.93■■■□□ 2.54
SSBP3-204ENST00000371320 SIX1Q15475 284 aaPredicted RBP30.93■■■□□ 2.54
SSBP3-204ENST00000371320 PARP2Q9UGN5 583 aa30.93■■■□□ 2.54
SSBP3-204ENST00000371320 EBAG9O00559 213 aa30.92■■■□□ 2.54
SSBP3-204ENST00000371320 RRM1P23921 792 aa30.92■■■□□ 2.54
SSBP3-204ENST00000371320 KRT71Q3SY84 523 aa30.92■■■□□ 2.54
SSBP3-204ENST00000371320 CGRRF1Q99675 332 aa30.92■■■□□ 2.54
SSBP3-204ENST00000371320 TMEM134Q9H6X4 195 aa30.92■■■□□ 2.54
SSBP3-204ENST00000371320 LOC285556D6RIA3 1793 aa30.92■■■□□ 2.54
SSBP3-204ENST00000371320 ACO1P21399 889 aaKnown RBP30.91■■■□□ 2.54
SSBP3-204ENST00000371320 PMS2P54278 862 aa30.91■■■□□ 2.54
SSBP3-204ENST00000371320 TARBP2Q15633 366 aaKnown RBP30.91■■■□□ 2.54
SSBP3-204ENST00000371320 FAM160B1Q5W0V3 765 aa30.91■■■□□ 2.54
SSBP3-204ENST00000371320 APOBEC3GQ9HC16 384 aaKnown RBP30.91■■■□□ 2.54
SSBP3-204ENST00000371320 PCDHB4Q9Y5E5 795 aa30.91■■■□□ 2.54
SSBP3-204ENST00000371320 MROH7Q68CQ1 1323 aa30.91■■■□□ 2.54
SSBP3-204ENST00000371320 CLDN3O15551 220 aa30.91■■■□□ 2.54
SSBP3-204ENST00000371320 CYP1A1P04798 512 aaPredicted RBP30.91■■■□□ 2.54
SSBP3-204ENST00000371320 FNTAP49354 379 aa30.91■■■□□ 2.54
SSBP3-204ENST00000371320 STAT5BP51692 787 aa30.91■■■□□ 2.54
SSBP3-204ENST00000371320 CENPCQ03188 943 aa30.91■■■□□ 2.54
SSBP3-204ENST00000371320 ODF2Q5BJF6 829 aa30.91■■■□□ 2.54
SSBP3-204ENST00000371320 PHLDB2Q86SQ0 1253 aa30.91■■■□□ 2.54
SSBP3-204ENST00000371320 C12orf50Q8NA57 414 aaPredicted RBP30.91■■■□□ 2.54
SSBP3-204ENST00000371320 CYFIP2Q96F07 1278 aa30.91■■■□□ 2.54
SSBP3-204ENST00000371320 TRIM7Q9C029 511 aa30.91■■■□□ 2.54
SSBP3-204ENST00000371320 SOWAHBA6NEL2 793 aa30.9■■■□□ 2.54
SSBP3-204ENST00000371320 NDUFAB1O14561 156 aa30.9■■■□□ 2.54
SSBP3-204ENST00000371320 EDN1P05305 212 aa30.9■■■□□ 2.54
SSBP3-204ENST00000371320 CAPSQ13938 189 aa30.9■■■□□ 2.54
SSBP3-204ENST00000371320 NEDD9Q14511 834 aa30.9■■■□□ 2.54
SSBP3-204ENST00000371320 NCAPG2Q86XI2 1143 aa30.9■■■□□ 2.54
SSBP3-204ENST00000371320 EPN3Q9H201 632 aa30.9■■■□□ 2.54
SSBP3-204ENST00000371320 PABPC3Q9H361 631 aaKnown RBP30.9■■■□□ 2.54
SSBP3-204ENST00000371320 PTPN22Q9Y2R2 807 aa30.9■■■□□ 2.54
SSBP3-204ENST00000371320 EDNRBP24530 442 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms