RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 BRAPQ7Z569 592 aa17.68■□□□□ 0.42
VMA21-202ENST00000370361 TSPAN18Q96SJ8 248 aa17.68■□□□□ 0.42
VMA21-202ENST00000370361 CNTN3Q9P232 1028 aa17.68■□□□□ 0.42
VMA21-202ENST00000370361 ODF2LQ9ULJ1 636 aa17.68■□□□□ 0.42
VMA21-202ENST00000370361 CACNA1HO95180 2353 aa17.68■□□□□ 0.42
VMA21-202ENST00000370361 PP2D1A8MPX8 630 aa17.67■□□□□ 0.42
VMA21-202ENST00000370361 C8AP07357 584 aa17.67■□□□□ 0.42
VMA21-202ENST00000370361 SPATA31D3P0C874 917 aa17.67■□□□□ 0.42
VMA21-202ENST00000370361 SRFP11831 508 aa17.67■□□□□ 0.42
VMA21-202ENST00000370361 LAMP2P13473 410 aa17.67■□□□□ 0.42
VMA21-202ENST00000370361 RPL17P18621 184 aaKnown RBP17.67■□□□□ 0.42
VMA21-202ENST00000370361 FSHRP23945 695 aa17.67■□□□□ 0.42
VMA21-202ENST00000370361 CLCNKBP51801 687 aa17.67■□□□□ 0.42
VMA21-202ENST00000370361 NOLC1Q14978 699 aaKnown RBP eCLIP17.67■□□□□ 0.42
VMA21-202ENST00000370361 SPATA31D4Q6ZUB0 917 aa17.67■□□□□ 0.42
VMA21-202ENST00000370361 GLYCTKQ8IVS8 523 aa17.67■□□□□ 0.42
VMA21-202ENST00000370361 RABGGTAQ92696 567 aa17.67■□□□□ 0.42
VMA21-202ENST00000370361 CALML4Q96GE6 196 aa17.67■□□□□ 0.42
VMA21-202ENST00000370361 SNX27Q96L92 541 aa17.67■□□□□ 0.42
VMA21-202ENST00000370361 TARS2Q9BW92 718 aaKnown RBP17.67■□□□□ 0.42
VMA21-202ENST00000370361 PLEKHA5Q9HAU0 1116 aa17.67■□□□□ 0.42
VMA21-202ENST00000370361 MAFFQ9ULX9 164 aa17.67■□□□□ 0.42
VMA21-202ENST00000370361 CITO14578 2027 aa17.67■□□□□ 0.42
VMA21-202ENST00000370361 DOCK8Q8NF50 2099 aa17.67■□□□□ 0.42
VMA21-202ENST00000370361 MYH11P35749 1972 aa17.66■□□□□ 0.42
VMA21-202ENST00000370361 VWA3AA6NCI4 1184 aa17.66■□□□□ 0.42
VMA21-202ENST00000370361 ANHXE9PGG2 379 aa17.66■□□□□ 0.42
VMA21-202ENST00000370361 H7C4K7 107 aa17.66■□□□□ 0.42
VMA21-202ENST00000370361 SLC16A4O15374 487 aa17.66■□□□□ 0.42
VMA21-202ENST00000370361 N4BP1O75113 896 aaKnown RBP17.66■□□□□ 0.42
VMA21-202ENST00000370361 PDGFBP01127 241 aaPredicted RBP17.66■□□□□ 0.42
VMA21-202ENST00000370361 CDC25AP30304 524 aa17.66■□□□□ 0.42
VMA21-202ENST00000370361 SLC12A3P55017 1021 aa17.66■□□□□ 0.42
VMA21-202ENST00000370361 TMEM119Q4V9L6 283 aa17.66■□□□□ 0.42
VMA21-202ENST00000370361 GLRA4Q5JXX5 417 aa17.66■□□□□ 0.42
VMA21-202ENST00000370361 MTSS1LQ765P7 747 aa17.66■□□□□ 0.42
VMA21-202ENST00000370361 TAS1R3Q7RTX0 852 aa17.66■□□□□ 0.42
VMA21-202ENST00000370361 TMEM161BQ8NDZ6 487 aa17.66■□□□□ 0.42
VMA21-202ENST00000370361 MYADMQ96S97 322 aa17.66■□□□□ 0.42
VMA21-202ENST00000370361 CACNG4Q9UBN1 327 aa17.66■□□□□ 0.42
VMA21-202ENST00000370361 KCNH3Q9ULD8 1083 aa17.66■□□□□ 0.42
VMA21-202ENST00000370361 USP20Q9Y2K6 914 aa17.66■□□□□ 0.42
VMA21-202ENST00000370361 VWA8A3KMH1 1905 aa17.66■□□□□ 0.42
VMA21-202ENST00000370361 ABLIM1O14639 778 aa17.65■□□□□ 0.42
VMA21-202ENST00000370361 CLDN3O15551 220 aa17.65■□□□□ 0.42
VMA21-202ENST00000370361 CD2BP2O95400 341 aaKnown RBP17.65■□□□□ 0.42
VMA21-202ENST00000370361 PLA2G4BP0C869 781 aa17.65■□□□□ 0.42
VMA21-202ENST00000370361 MAPTP10636 758 aaKnown RBP17.65■□□□□ 0.42
VMA21-202ENST00000370361 AOC1P19801 751 aa17.65■□□□□ 0.42
VMA21-202ENST00000370361 PDCP20941 246 aa17.65■□□□□ 0.42
VMA21-202ENST00000370361 LONP1P36776 959 aaKnown RBP17.65■□□□□ 0.42
VMA21-202ENST00000370361 UBA7P41226 1012 aa17.65■□□□□ 0.42
VMA21-202ENST00000370361 MCL1Q07820 350 aa17.65■□□□□ 0.42
VMA21-202ENST00000370361 ZRSR1Q15695 479 aaKnown RBP17.65■□□□□ 0.42
VMA21-202ENST00000370361 AXDND1Q5T1B0 1012 aaPredicted RBP17.65■□□□□ 0.42
VMA21-202ENST00000370361 LARP1BQ659C4 914 aaKnown RBP17.65■□□□□ 0.42
VMA21-202ENST00000370361 SLC8B1Q6J4K2 584 aa17.65■□□□□ 0.42
VMA21-202ENST00000370361 GET4Q7L5D6 327 aaPredicted RBP17.65■□□□□ 0.42
VMA21-202ENST00000370361 KCNK18Q7Z418 384 aa17.65■□□□□ 0.42
VMA21-202ENST00000370361 SLC44A3Q8N4M1 653 aa17.65■□□□□ 0.42
VMA21-202ENST00000370361 TMEM105Q8N8V8 129 aa17.65■□□□□ 0.42
VMA21-202ENST00000370361 ATOH1Q92858 354 aaPredicted RBP17.65■□□□□ 0.42
VMA21-202ENST00000370361 OXCT2Q9BYC2 517 aaPredicted RBP17.65■□□□□ 0.42
VMA21-202ENST00000370361 SLC2A4RGQ9NR83 387 aa17.65■□□□□ 0.42
VMA21-202ENST00000370361 CDH7Q9ULB5 785 aa17.65■□□□□ 0.42
VMA21-202ENST00000370361 TRIP11Q15643 1979 aa17.64■□□□□ 0.41
VMA21-202ENST00000370361 PROB1E7EW31 1015 aa17.64■□□□□ 0.41
VMA21-202ENST00000370361 PODXLO00592 558 aa17.64■□□□□ 0.41
VMA21-202ENST00000370361 XPOTO43592 962 aaKnown RBP17.64■□□□□ 0.41
VMA21-202ENST00000370361 PAX3P23760 479 aa17.64■□□□□ 0.41
VMA21-202ENST00000370361 OR1D2P34982 312 aa17.64■□□□□ 0.41
VMA21-202ENST00000370361 HTR4Q13639 388 aa17.64■□□□□ 0.41
VMA21-202ENST00000370361 SIX5Q8N196 739 aa17.64■□□□□ 0.41
VMA21-202ENST00000370361 SLC7A14Q8TBB6 771 aa17.64■□□□□ 0.41
VMA21-202ENST00000370361 FEZF2Q8TBJ5 459 aa17.64■□□□□ 0.41
VMA21-202ENST00000370361 PNMA5Q96PV4 448 aa17.64■□□□□ 0.41
VMA21-202ENST00000370361 BACH2Q9BYV9 841 aa17.64■□□□□ 0.41
VMA21-202ENST00000370361 SMOC2Q9H3U7 446 aa17.64■□□□□ 0.41
VMA21-202ENST00000370361 POLD4Q9HCU8 107 aa17.64■□□□□ 0.41
VMA21-202ENST00000370361 AVENQ9NQS1 362 aaPredicted RBP17.64■□□□□ 0.41
VMA21-202ENST00000370361 NUB1Q9Y5A7 615 aa17.64■□□□□ 0.41
VMA21-202ENST00000370361 GTF3C3Q9Y5Q9 886 aa17.64■□□□□ 0.41
VMA21-202ENST00000370361 CDY1Q9Y6F8 540 aa17.64■□□□□ 0.41
VMA21-202ENST00000370361 CLTAP09496 248 aa17.63■□□□□ 0.41
VMA21-202ENST00000370361 RFX1P22670 979 aa17.63■□□□□ 0.41
VMA21-202ENST00000370361 TKTP29401 623 aaKnown RBP17.63■□□□□ 0.41
VMA21-202ENST00000370361 NCKAP1LP55160 1127 aa17.63■□□□□ 0.41
VMA21-202ENST00000370361 OSTNP61366 133 aa17.63■□□□□ 0.41
VMA21-202ENST00000370361 TPGS2Q68CL5 300 aa17.63■□□□□ 0.41
VMA21-202ENST00000370361 CWF19L1Q69YN2 538 aaKnown RBP17.63■□□□□ 0.41
VMA21-202ENST00000370361 GRASPQ7Z6J2 395 aaPredicted RBP17.63■□□□□ 0.41
VMA21-202ENST00000370361 CEP120Q8N960 986 aa17.63■□□□□ 0.41
VMA21-202ENST00000370361 APPL2Q8NEU8 664 aa17.63■□□□□ 0.41
VMA21-202ENST00000370361 FLCNQ8NFG4 579 aa17.63■□□□□ 0.41
VMA21-202ENST00000370361 ZNF461Q8TAF7 563 aa17.63■□□□□ 0.41
VMA21-202ENST00000370361 SHDQ96IW2 340 aa17.63■□□□□ 0.41
VMA21-202ENST00000370361 CXCL16Q9H2A7 254 aa17.63■□□□□ 0.41
VMA21-202ENST00000370361 ANKFY1Q9P2R3 1169 aa17.63■□□□□ 0.41
VMA21-202ENST00000370361 ARHGEF37A1IGU5 675 aa17.62■□□□□ 0.41
VMA21-202ENST00000370361 CYP3A5P20815 502 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms