RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 C20orf96Q9NUD7 363 aaPredicted RBP13.1□□□□□ -0.31
HCFC1-202ENST00000369984 H2AFY2Q9P0M6 372 aaPredicted RBP13.1□□□□□ -0.31
HCFC1-202ENST00000369984 ASAP1Q9ULH1 1129 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 PITPNM2Q9BZ72 1349 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 NFIBO00712 420 aa13.09□□□□□ -0.31
HCFC1-202ENST00000369984 NLRP11P59045 1033 aaKnown RBP13.09□□□□□ -0.31
HCFC1-202ENST00000369984 RBAKQ9NYW8 714 aaPredicted RBP13.09□□□□□ -0.31
HCFC1-202ENST00000369984 TJP2Q9UDY2 1190 aa13.09□□□□□ -0.31
HCFC1-202ENST00000369984 SMG5Q9UPR3 1016 aaKnown RBP13.09□□□□□ -0.31
HCFC1-202ENST00000369984 SAMD9Q5K651 1589 aa13.09□□□□□ -0.31
HCFC1-202ENST00000369984 ATXN3P54252 364 aaPredicted RBP13.09□□□□□ -0.31
HCFC1-202ENST00000369984 ENOSF1Q7L5Y1 443 aa13.09□□□□□ -0.31
HCFC1-202ENST00000369984 ST13P5Q8NFI4 369 aaPredicted RBP13.09□□□□□ -0.31
HCFC1-202ENST00000369984 ZNF473Q8WTR7 871 aaKnown RBP13.09□□□□□ -0.31
HCFC1-202ENST00000369984 PLEKHF1Q96S99 279 aa13.09□□□□□ -0.31
HCFC1-202ENST00000369984 CARD9Q9H257 536 aa13.09□□□□□ -0.31
HCFC1-202ENST00000369984 EPC1Q9H2F5 836 aa13.09□□□□□ -0.31
HCFC1-202ENST00000369984 GJB4Q9NTQ9 266 aa13.09□□□□□ -0.31
HCFC1-202ENST00000369984 NEDD4P46934 1319 aa13.09□□□□□ -0.31
HCFC1-202ENST00000369984 ADGRA2Q96PE1 1338 aa13.09□□□□□ -0.31
HCFC1-202ENST00000369984 NLGN1Q8N2Q7 840 aa13.09□□□□□ -0.31
HCFC1-202ENST00000369984 NECTIN1Q15223 517 aa13.09□□□□□ -0.31
HCFC1-202ENST00000369984 APLFQ8IW19 511 aaPredicted RBP13.09□□□□□ -0.31
HCFC1-202ENST00000369984 SH3TC2Q8TF17 1288 aa13.09□□□□□ -0.31
HCFC1-202ENST00000369984 CNBD2Q96M20 576 aa13.09□□□□□ -0.31
HCFC1-202ENST00000369984 LBHD1Q9BQE6 289 aaPredicted RBP13.09□□□□□ -0.31
HCFC1-202ENST00000369984 KLHL11Q9NVR0 708 aa13.09□□□□□ -0.31
HCFC1-202ENST00000369984 NSMCE4AQ9NXX6 385 aa13.09□□□□□ -0.31
HCFC1-202ENST00000369984 SLAIN2Q9P270 581 aa13.09□□□□□ -0.31
HCFC1-202ENST00000369984 PSMA4P25789 261 aaKnown RBP13.09□□□□□ -0.31
HCFC1-202ENST00000369984 PLOD1Q02809 727 aaPredicted RBP13.09□□□□□ -0.31
HCFC1-202ENST00000369984 OSBPL5Q9H0X9 879 aaPredicted RBP13.09□□□□□ -0.31
HCFC1-202ENST00000369984 USP15Q9Y4E8 981 aaPredicted RBP13.09□□□□□ -0.31
HCFC1-202ENST00000369984 USP27XA6NNY8 438 aa13.09□□□□□ -0.31
HCFC1-202ENST00000369984 ZNF189O75820 626 aaPredicted RBP13.09□□□□□ -0.31
HCFC1-202ENST00000369984 COPB2P35606 906 aa13.09□□□□□ -0.31
HCFC1-202ENST00000369984 CLK1P49759 484 aaKnown RBP13.09□□□□□ -0.31
HCFC1-202ENST00000369984 C6orf10Q5SRN2 563 aa13.09□□□□□ -0.31
HCFC1-202ENST00000369984 RFFLQ8WZ73 363 aa13.09□□□□□ -0.31
HCFC1-202ENST00000369984 SRPK1Q96SB4 655 aaKnown RBP13.09□□□□□ -0.31
HCFC1-202ENST00000369984 FAM217BQ9NTX9 383 aaPredicted RBP13.09□□□□□ -0.31
HCFC1-202ENST00000369984 MARCOQ9UEW3 520 aaPredicted RBP13.09□□□□□ -0.31
HCFC1-202ENST00000369984 RPAP1Q9BWH6 1393 aaPredicted RBP13.09□□□□□ -0.31
HCFC1-202ENST00000369984 MYL2P10916 166 aa13.08□□□□□ -0.31
HCFC1-202ENST00000369984 CCDC144BQ3MJ40 725 aa13.08□□□□□ -0.31
HCFC1-202ENST00000369984 HEATR4Q86WZ0 1026 aa13.08□□□□□ -0.31
HCFC1-202ENST00000369984 STAG2Q8N3U4 1231 aa13.08□□□□□ -0.31
HCFC1-202ENST00000369984 PCYOX1LQ8NBM8 494 aa13.08□□□□□ -0.31
HCFC1-202ENST00000369984 POLR3FQ9H1D9 316 aaPredicted RBP13.08□□□□□ -0.31
HCFC1-202ENST00000369984 EMSYQ7Z589 1322 aa13.08□□□□□ -0.31
HCFC1-202ENST00000369984 KCNQ4P56696 695 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 PRPF39Q86UA1 669 aaKnown RBP13.08□□□□□ -0.32
HCFC1-202ENST00000369984 ASAP3Q8TDY4 903 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 TADA1Q96BN2 335 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 INTS2Q9H0H0 1204 aaKnown RBP13.08□□□□□ -0.32
HCFC1-202ENST00000369984 GID8Q9NWU2 228 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 AP3B1O00203 1094 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 ZNF197O14709 1029 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 KLHL18O94889 574 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 TCN1P20061 433 aaPredicted RBP13.08□□□□□ -0.32
HCFC1-202ENST00000369984 CEP95Q96GE4 821 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 FEM1BQ9UK73 627 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 HSD17B4P51659 736 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 TPI1P60174 286 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 TXNRD1Q16881 649 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 LONRF1Q17RB8 773 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 CYFIP1Q7L576 1253 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 SNRNP27Q8WVK2 155 aaKnown RBP13.08□□□□□ -0.32
HCFC1-202ENST00000369984 DBR1Q9UK59 544 aaKnown RBP13.08□□□□□ -0.32
HCFC1-202ENST00000369984 TTC26A0AVF1 554 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 BFSP2Q13515 415 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 RASGRF1Q13972 1273 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 TRIP4Q15650 581 aaPredicted RBP13.08□□□□□ -0.32
HCFC1-202ENST00000369984 DIS3LQ8TF46 1054 aaKnown RBP13.08□□□□□ -0.32
HCFC1-202ENST00000369984 CCT8L2Q96SF2 557 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 C2orf40Q9H1Z8 148 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 M0R3G1 203 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 GH2P01242 217 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 PRKCQQ04759 706 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 ATL2Q8NHH9 583 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 WDR48Q8TAF3 677 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 ELMO2Q96JJ3 720 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 PRPF18Q99633 342 aaKnown RBP13.08□□□□□ -0.32
HCFC1-202ENST00000369984 C10orf88Q9H8K7 445 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 HPS4Q9NQG7 708 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 SOX13Q9UN79 622 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 ATP10AO60312 1499 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 DPYSL4O14531 572 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 ASNSP08243 561 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 DUOXA2Q1HG44 320 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 AASDHQ4L235 1098 aaPredicted RBP13.08□□□□□ -0.32
HCFC1-202ENST00000369984 EFHBQ8N7U6 833 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 SPON2Q9BUD6 331 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 TBC1D22BQ9NU19 505 aa13.08□□□□□ -0.32
HCFC1-202ENST00000369984 GRIK1P39086 918 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 MCAMP43121 646 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 RPS6P62753 249 aaKnown RBP13.07□□□□□ -0.32
HCFC1-202ENST00000369984 SYTL3Q4VX76 610 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 MTHFD1LQ6UB35 978 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 PID1Q7Z2X4 250 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms