RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 ANK1P16157 1881 aa22.45■■□□□ 1.18
SMNDC1-201ENST00000369592 TTC26A0AVF1 554 aa22.44■■□□□ 1.18
SMNDC1-201ENST00000369592 LOC730098B7Z3J9 87 aa22.44■■□□□ 1.18
SMNDC1-201ENST00000369592 TADA2AO75478 443 aa22.44■■□□□ 1.18
SMNDC1-201ENST00000369592 SF3B1O75533 1304 aaKnown RBP eCLIP22.44■■□□□ 1.18
SMNDC1-201ENST00000369592 MRE11P49959 708 aa22.44■■□□□ 1.18
SMNDC1-201ENST00000369592 CLCNKBP51801 687 aa22.44■■□□□ 1.18
SMNDC1-201ENST00000369592 DNM1Q05193 864 aaKnown RBP22.44■■□□□ 1.18
SMNDC1-201ENST00000369592 SEZ6Q53EL9 994 aa22.44■■□□□ 1.18
SMNDC1-201ENST00000369592 ZC2HC1CQ53FD0 456 aaPredicted RBP22.44■■□□□ 1.18
SMNDC1-201ENST00000369592 RTP2Q5QGT7 225 aa22.44■■□□□ 1.18
SMNDC1-201ENST00000369592 DCLRE1AQ6PJP8 1040 aa22.44■■□□□ 1.18
SMNDC1-201ENST00000369592 C3orf58Q8NDZ4 430 aa22.44■■□□□ 1.18
SMNDC1-201ENST00000369592 PHF7Q9BWX1 381 aaPredicted RBP22.44■■□□□ 1.18
SMNDC1-201ENST00000369592 PLEKHA5Q9HAU0 1116 aa22.44■■□□□ 1.18
SMNDC1-201ENST00000369592 GOLGA2P5Q9HBQ8 144 aa22.44■■□□□ 1.18
SMNDC1-201ENST00000369592 OLFML3Q9NRN5 406 aa22.44■■□□□ 1.18
SMNDC1-201ENST00000369592 PCDHA7Q9UN72 937 aa22.44■■□□□ 1.18
SMNDC1-201ENST00000369592 C2orf16Q68DN1 1984 aa22.43■■□□□ 1.18
SMNDC1-201ENST00000369592 DENND4AQ7Z401 1863 aa22.43■■□□□ 1.18
SMNDC1-201ENST00000369592 C2CD2LO14523 706 aa22.43■■□□□ 1.18
SMNDC1-201ENST00000369592 CLTAP09496 248 aa22.43■■□□□ 1.18
SMNDC1-201ENST00000369592 GAP43P17677 238 aa22.43■■□□□ 1.18
SMNDC1-201ENST00000369592 ITIH3Q06033 890 aa22.43■■□□□ 1.18
SMNDC1-201ENST00000369592 ZBTB6Q15916 424 aa22.43■■□□□ 1.18
SMNDC1-201ENST00000369592 TPRNQ4KMQ1 711 aa22.43■■□□□ 1.18
SMNDC1-201ENST00000369592 CNNM4Q6P4Q7 775 aa22.43■■□□□ 1.18
SMNDC1-201ENST00000369592 LILRA6Q6PI73 481 aa22.43■■□□□ 1.18
SMNDC1-201ENST00000369592 PDILTQ8N807 584 aa22.43■■□□□ 1.18
SMNDC1-201ENST00000369592 FEZF2Q8TBJ5 459 aa22.43■■□□□ 1.18
SMNDC1-201ENST00000369592 PIK3R5Q8WYR1 880 aa22.43■■□□□ 1.18
SMNDC1-201ENST00000369592 HVCN1Q96D96 273 aa22.43■■□□□ 1.18
SMNDC1-201ENST00000369592 FBXL18Q96ME1 805 aa22.43■■□□□ 1.18
SMNDC1-201ENST00000369592 ZHX3Q9H4I2 956 aa22.43■■□□□ 1.18
SMNDC1-201ENST00000369592 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.43■■□□□ 1.18
SMNDC1-201ENST00000369592 SLC38A7Q9NVC3 462 aa22.43■■□□□ 1.18
SMNDC1-201ENST00000369592 CDH22Q9UJ99 828 aa22.43■■□□□ 1.18
SMNDC1-201ENST00000369592 ANKRD63C9JTQ0 380 aa22.42■■□□□ 1.18
SMNDC1-201ENST00000369592 HNRNPDLO14979 420 aaKnown RBP22.42■■□□□ 1.18
SMNDC1-201ENST00000369592 OGTO15294 1046 aa22.42■■□□□ 1.18
SMNDC1-201ENST00000369592 HARSP12081 509 aaKnown RBP22.42■■□□□ 1.18
SMNDC1-201ENST00000369592 FGFR3P22607 806 aa22.42■■□□□ 1.18
SMNDC1-201ENST00000369592 KLRC2P26717 231 aa22.42■■□□□ 1.18
SMNDC1-201ENST00000369592 CA8P35219 290 aa22.42■■□□□ 1.18
SMNDC1-201ENST00000369592 TNFSF9P41273 254 aa22.42■■□□□ 1.18
SMNDC1-201ENST00000369592 LIG4P49917 911 aa22.42■■□□□ 1.18
SMNDC1-201ENST00000369592 FOXD4L6Q3SYB3 417 aaPredicted RBP22.42■■□□□ 1.18
SMNDC1-201ENST00000369592 ZBTB41Q5SVQ8 909 aa22.42■■□□□ 1.18
SMNDC1-201ENST00000369592 FOXD4L3Q6VB84 417 aaPredicted RBP22.42■■□□□ 1.18
SMNDC1-201ENST00000369592 C12orf76Q8N812 135 aaPredicted RBP22.42■■□□□ 1.18
SMNDC1-201ENST00000369592 LNX1Q8TBB1 728 aaPredicted RBP22.42■■□□□ 1.18
SMNDC1-201ENST00000369592 HASPINQ8TF76 798 aa22.42■■□□□ 1.18
SMNDC1-201ENST00000369592 DDX27Q96GQ7 796 aaKnown RBP22.42■■□□□ 1.18
SMNDC1-201ENST00000369592 POP1Q99575 1024 aaKnown RBP22.42■■□□□ 1.18
SMNDC1-201ENST00000369592 TNMDQ9H2S6 317 aa22.42■■□□□ 1.18
SMNDC1-201ENST00000369592 CUEDC2Q9H467 287 aa22.42■■□□□ 1.18
SMNDC1-201ENST00000369592 CFAP45Q9UL16 551 aa22.42■■□□□ 1.18
SMNDC1-201ENST00000369592 PRR33A8MZF0 331 aa22.41■■□□□ 1.18
SMNDC1-201ENST00000369592 ADH1AP07327 375 aa22.41■■□□□ 1.18
SMNDC1-201ENST00000369592 CXCL8P10145 99 aa22.41■■□□□ 1.18
SMNDC1-201ENST00000369592 ELAVL2Q12926 359 aaKnown RBP22.41■■□□□ 1.18
SMNDC1-201ENST00000369592 ENOX2Q16206 610 aaKnown RBP22.41■■□□□ 1.18
SMNDC1-201ENST00000369592 KYAT1Q16773 422 aa22.41■■□□□ 1.18
SMNDC1-201ENST00000369592 RESP18Q5W5W9 173 aa22.41■■□□□ 1.18
SMNDC1-201ENST00000369592 KANK3Q6NY19 840 aa22.41■■□□□ 1.18
SMNDC1-201ENST00000369592 RIN2Q8WYP3 895 aaPredicted RBP22.41■■□□□ 1.18
SMNDC1-201ENST00000369592 C18orf25Q96B23 403 aaPredicted RBP22.41■■□□□ 1.18
SMNDC1-201ENST00000369592 BICD1Q96G01 975 aa22.41■■□□□ 1.18
SMNDC1-201ENST00000369592 TTPALQ9BTX7 342 aa22.41■■□□□ 1.18
SMNDC1-201ENST00000369592 APOL5Q9BWW9 433 aa22.41■■□□□ 1.18
SMNDC1-201ENST00000369592 RHOBTB2Q9BYZ6 727 aa22.41■■□□□ 1.18
SMNDC1-201ENST00000369592 IKZF4Q9H2S9 585 aa22.41■■□□□ 1.18
SMNDC1-201ENST00000369592 CPSF3Q9UKF6 684 aaKnown RBP22.41■■□□□ 1.18
SMNDC1-201ENST00000369592 TISP43B9A030 160 aa22.4■■□□□ 1.18
SMNDC1-201ENST00000369592 B3GAT3O94766 335 aa22.4■■□□□ 1.18
SMNDC1-201ENST00000369592 ADSSP30520 456 aa22.4■■□□□ 1.18
SMNDC1-201ENST00000369592 RPL9P32969 192 aaKnown RBP22.4■■□□□ 1.18
SMNDC1-201ENST00000369592 CASP5P51878 434 aa22.4■■□□□ 1.18
SMNDC1-201ENST00000369592 KCNA1Q09470 495 aa22.4■■□□□ 1.18
SMNDC1-201ENST00000369592 FAM171A1Q5VUB5 890 aa22.4■■□□□ 1.18
SMNDC1-201ENST00000369592 KIAA1841Q6NSI8 718 aa22.4■■□□□ 1.18
SMNDC1-201ENST00000369592 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.4■■□□□ 1.18
SMNDC1-201ENST00000369592 CMASQ8NFW8 434 aaPredicted RBP22.4■■□□□ 1.18
SMNDC1-201ENST00000369592 HDAC7Q8WUI4 952 aa22.4■■□□□ 1.18
SMNDC1-201ENST00000369592 CLSTN3Q9BQT9 956 aa22.4■■□□□ 1.18
SMNDC1-201ENST00000369592 FGFBP2Q9BYJ0 223 aa22.4■■□□□ 1.18
SMNDC1-201ENST00000369592 TRIM9Q9C026 710 aa22.4■■□□□ 1.18
SMNDC1-201ENST00000369592 TRIOO75962 3097 aa22.4■■□□□ 1.18
SMNDC1-201ENST00000369592 MYO10Q9HD67 2058 aa22.39■■□□□ 1.17
SMNDC1-201ENST00000369592 SSTR3P32745 418 aaPredicted RBP22.39■■□□□ 1.17
SMNDC1-201ENST00000369592 POU5F1Q01860 360 aaKnown RBP22.39■■□□□ 1.17
SMNDC1-201ENST00000369592 PRSS55Q6UWB4 352 aaPredicted RBP22.39■■□□□ 1.17
SMNDC1-201ENST00000369592 GPR149Q86SP6 731 aa22.39■■□□□ 1.17
SMNDC1-201ENST00000369592 IQUBQ8NA54 791 aa22.39■■□□□ 1.17
SMNDC1-201ENST00000369592 TMEM87AQ8NBN3 555 aa22.39■■□□□ 1.17
SMNDC1-201ENST00000369592 NECTIN4Q96NY8 510 aa22.39■■□□□ 1.17
SMNDC1-201ENST00000369592 TSPAN18Q96SJ8 248 aa22.39■■□□□ 1.17
SMNDC1-201ENST00000369592 SFXN1Q9H9B4 322 aa22.39■■□□□ 1.17
SMNDC1-201ENST00000369592 LACTBL1A8MY62 500 aa22.38■■□□□ 1.17
SMNDC1-201ENST00000369592 PODXLO00592 558 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms