RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 MTMR12Q9C0I1 747 aa25.78■■□□□ 1.72
SNX3-203ENST00000368979 UBE2TQ9NPD8 197 aaPredicted RBP25.78■■□□□ 1.72
SNX3-203ENST00000368979 PPP2R2CQ9Y2T4 447 aa25.78■■□□□ 1.72
SNX3-203ENST00000368979 RPS6KA5O75582 802 aa25.78■■□□□ 1.72
SNX3-203ENST00000368979 SERPING1P05155 500 aa25.78■■□□□ 1.72
SNX3-203ENST00000368979 PLEKP08567 350 aaPredicted RBP25.78■■□□□ 1.72
SNX3-203ENST00000368979 STAT1P42224 750 aa25.78■■□□□ 1.72
SNX3-203ENST00000368979 MAPK8IP2Q13387 824 aaPredicted RBP25.78■■□□□ 1.72
SNX3-203ENST00000368979 DUOXA2Q1HG44 320 aa25.78■■□□□ 1.72
SNX3-203ENST00000368979 DESI2Q9BSY9 194 aa25.78■■□□□ 1.72
SNX3-203ENST00000368979 ADGRG1Q9Y653 693 aa25.78■■□□□ 1.72
SNX3-203ENST00000368979 EPN1Q9Y6I3 576 aaPredicted RBP25.78■■□□□ 1.72
SNX3-203ENST00000368979 SSU72P8A0A1W2PR75 194 aa25.77■■□□□ 1.72
SNX3-203ENST00000368979 NDUFA10O95299 355 aa25.77■■□□□ 1.72
SNX3-203ENST00000368979 SOX5P35711 763 aa25.77■■□□□ 1.72
SNX3-203ENST00000368979 PRKCIP41743 596 aa25.77■■□□□ 1.72
SNX3-203ENST00000368979 TRAPPC11Q7Z392 1133 aa25.77■■□□□ 1.72
SNX3-203ENST00000368979 IRF2BP2Q7Z5L9 587 aa25.77■■□□□ 1.72
SNX3-203ENST00000368979 GPIHBP1Q8IV16 184 aa25.77■■□□□ 1.72
SNX3-203ENST00000368979 TRPV6Q9H1D0 765 aa25.77■■□□□ 1.72
SNX3-203ENST00000368979 TRMT1Q9NXH9 659 aaKnown RBP25.77■■□□□ 1.72
SNX3-203ENST00000368979 CCP110O43303 1012 aa25.76■■□□□ 1.71
SNX3-203ENST00000368979 NFICP08651 508 aa25.76■■□□□ 1.71
SNX3-203ENST00000368979 TMEM191BP0C7N4 346 aa25.76■■□□□ 1.71
SNX3-203ENST00000368979 CYLC1P35663 651 aaPredicted RBP25.76■■□□□ 1.71
SNX3-203ENST00000368979 CDK7P50613 346 aa25.76■■□□□ 1.71
SNX3-203ENST00000368979 TFAMQ00059 246 aaKnown RBP25.76■■□□□ 1.71
SNX3-203ENST00000368979 CD302Q8IX05 232 aa25.76■■□□□ 1.71
SNX3-203ENST00000368979 ANKRD36BP1Q96IX9 119 aa25.76■■□□□ 1.71
SNX3-203ENST00000368979 PPP1R13BQ96KQ4 1090 aa25.76■■□□□ 1.71
SNX3-203ENST00000368979 KREMEN1Q96MU8 473 aa25.76■■□□□ 1.71
SNX3-203ENST00000368979 PI4K2AQ9BTU6 479 aa25.76■■□□□ 1.71
SNX3-203ENST00000368979 SNTG2Q9NY99 539 aa25.76■■□□□ 1.71
SNX3-203ENST00000368979 ST3GAL5Q9UNP4 418 aa25.76■■□□□ 1.71
SNX3-203ENST00000368979 ZSCAN12O43309 604 aa25.75■■□□□ 1.71
SNX3-203ENST00000368979 PHACTR2O75167 634 aa25.75■■□□□ 1.71
SNX3-203ENST00000368979 CCDC175P0C221 793 aa25.75■■□□□ 1.71
SNX3-203ENST00000368979 PNMA6AP0CW24 399 aaPredicted RBP25.75■■□□□ 1.71
SNX3-203ENST00000368979 FERP16591 822 aa25.75■■□□□ 1.71
SNX3-203ENST00000368979 EIF4A3P38919 411 aaKnown RBP25.75■■□□□ 1.71
SNX3-203ENST00000368979 NCOA4Q13772 614 aa25.75■■□□□ 1.71
SNX3-203ENST00000368979 ARHGAP44Q17R89 818 aa25.75■■□□□ 1.71
SNX3-203ENST00000368979 ASTE1Q2TB18 679 aaPredicted RBP25.75■■□□□ 1.71
SNX3-203ENST00000368979 FBXO47Q5MNV8 452 aa25.75■■□□□ 1.71
SNX3-203ENST00000368979 JADE1Q6IE81 842 aa25.75■■□□□ 1.71
SNX3-203ENST00000368979 FBXO46Q6PJ61 603 aaPredicted RBP25.75■■□□□ 1.71
SNX3-203ENST00000368979 FMNL3Q8IVF7 1028 aa25.75■■□□□ 1.71
SNX3-203ENST00000368979 PPM1KQ8N3J5 372 aa25.75■■□□□ 1.71
SNX3-203ENST00000368979 KAT5Q92993 513 aa25.75■■□□□ 1.71
SNX3-203ENST00000368979 TRIM6Q9C030 488 aaPredicted RBP25.75■■□□□ 1.71
SNX3-203ENST00000368979 NXF3Q9H4D5 531 aaKnown RBP25.75■■□□□ 1.71
SNX3-203ENST00000368979 PLEKHA5Q9HAU0 1116 aa25.75■■□□□ 1.71
SNX3-203ENST00000368979 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.75■■□□□ 1.716e-6■■■■■ 48.1
SNX3-203ENST00000368979 TNNC2P02585 160 aa25.74■■□□□ 1.71
SNX3-203ENST00000368979 MFAP3P55082 362 aa25.74■■□□□ 1.71
SNX3-203ENST00000368979 GCNT1Q02742 428 aa25.74■■□□□ 1.71
SNX3-203ENST00000368979 KLHL30Q0D2K2 578 aa25.74■■□□□ 1.71
SNX3-203ENST00000368979 TDRD12Q587J7 1177 aaKnown RBP25.74■■□□□ 1.71
SNX3-203ENST00000368979 WDR44Q5JSH3 913 aa25.74■■□□□ 1.71
SNX3-203ENST00000368979 REXO1L1PQ8IX06 675 aa25.74■■□□□ 1.71
SNX3-203ENST00000368979 ACRBPQ8NEB7 543 aa25.74■■□□□ 1.71
SNX3-203ENST00000368979 TATDN2Q93075 761 aa25.74■■□□□ 1.71
SNX3-203ENST00000368979 ZNF333Q96JL9 665 aa25.74■■□□□ 1.71
SNX3-203ENST00000368979 SNX27Q96L92 541 aa25.74■■□□□ 1.71
SNX3-203ENST00000368979 FAM81BQ96LP2 452 aa25.74■■□□□ 1.71
SNX3-203ENST00000368979 CCDC42Q96M95 316 aa25.74■■□□□ 1.71
SNX3-203ENST00000368979 AGO3Q9H9G7 860 aaKnown RBP25.74■■□□□ 1.71
SNX3-203ENST00000368979 ERVK-5Q9HDB9 667 aa25.74■■□□□ 1.71
SNX3-203ENST00000368979 C1orf112Q9NSG2 853 aa25.74■■□□□ 1.71
SNX3-203ENST00000368979 C2CD2Q9Y426 696 aa25.74■■□□□ 1.71
SNX3-203ENST00000368979 EIF3CLB5ME19 914 aaKnown RBP25.73■■□□□ 1.71
SNX3-203ENST00000368979 RBAK-RBAKDNI3L0D1 243 aa25.73■■□□□ 1.71
SNX3-203ENST00000368979 GPR182O15218 404 aa25.73■■□□□ 1.71
SNX3-203ENST00000368979 ARID5AQ03989 594 aa25.73■■□□□ 1.71
SNX3-203ENST00000368979 ZNF618Q5T7W0 954 aa25.73■■□□□ 1.71
SNX3-203ENST00000368979 SCARA3Q6AZY7 606 aa25.73■■□□□ 1.71
SNX3-203ENST00000368979 NT5DC4Q86YG4 428 aa25.73■■□□□ 1.71
SNX3-203ENST00000368979 TNS4Q8IZW8 715 aa25.73■■□□□ 1.71
SNX3-203ENST00000368979 EIF3CQ99613 913 aaKnown RBP25.73■■□□□ 1.71
SNX3-203ENST00000368979 OSBPL7Q9BZF2 842 aa25.73■■□□□ 1.71
SNX3-203ENST00000368979 CRISPLD2Q9H0B8 497 aa25.73■■□□□ 1.71
SNX3-203ENST00000368979 CHST12Q9NRB3 414 aa25.73■■□□□ 1.71
SNX3-203ENST00000368979 REXO2Q9Y3B8 237 aaKnown RBP25.73■■□□□ 1.71
SNX3-203ENST00000368979 BZW2Q9Y6E2 419 aaKnown RBP25.73■■□□□ 1.71
SNX3-203ENST00000368979 SQORQ9Y6N5 450 aa25.73■■□□□ 1.71
SNX3-203ENST00000368979 CITO14578 2027 aa25.73■■□□□ 1.71
SNX3-203ENST00000368979 FOXN3O00409 490 aaPredicted RBP25.73■■□□□ 1.71
SNX3-203ENST00000368979 EVI5O60447 810 aa25.73■■□□□ 1.71
SNX3-203ENST00000368979 GFPT2O94808 682 aa25.73■■□□□ 1.71
SNX3-203ENST00000368979 CST3P01034 146 aaPredicted RBP25.73■■□□□ 1.71
SNX3-203ENST00000368979 CKBP12277 381 aa25.73■■□□□ 1.71
SNX3-203ENST00000368979 KIF11P52732 1056 aa25.73■■□□□ 1.71
SNX3-203ENST00000368979 LPIN1Q14693 890 aa25.73■■□□□ 1.71
SNX3-203ENST00000368979 TRAF7Q6Q0C0 670 aa25.73■■□□□ 1.71
SNX3-203ENST00000368979 ENOSF1Q7L5Y1 443 aa25.73■■□□□ 1.71
SNX3-203ENST00000368979 SHC3Q92529 594 aa25.73■■□□□ 1.71
SNX3-203ENST00000368979 ELMO3Q96BJ8 720 aa25.73■■□□□ 1.71
SNX3-203ENST00000368979 HAUS4Q9H6D7 363 aa25.73■■□□□ 1.71
SNX3-203ENST00000368979 APOBEC3GQ9HC16 384 aaKnown RBP25.73■■□□□ 1.71
SNX3-203ENST00000368979 HES2Q9Y543 173 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms