RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 PTPRJQ12913 1337 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 XPOTO43592 962 aaKnown RBP13.3□□□□□ -0.28
TUBE1-202ENST00000368662 NBNO60934 754 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 MFAP3LO75121 409 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 PHACTR2O75167 634 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 ITGA4P13612 1032 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 RFC2P35250 354 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 ZBED6P86452 979 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 TFAMQ00059 246 aaKnown RBP13.3□□□□□ -0.28
TUBE1-202ENST00000368662 TSR1Q2NL82 804 aaKnown RBP13.3□□□□□ -0.28
TUBE1-202ENST00000368662 PLEKHG4Q58EX7 1191 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 TDRD10Q5VZ19 366 aaKnown RBP13.3□□□□□ -0.28
TUBE1-202ENST00000368662 JADE1Q6IE81 842 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 ALKAL1Q6UXT8 129 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 UBE2Q1Q7Z7E8 422 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 MRPL10Q7Z7H8 261 aaKnown RBP13.3□□□□□ -0.28
TUBE1-202ENST00000368662 OR5B17Q8NGF7 314 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 OSBPL7Q9BZF2 842 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 IMPG2Q9BZV3 1241 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 MTMR12Q9C0I1 747 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 C1orf112Q9NSG2 853 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 APEX2Q9UBZ4 518 aa13.3□□□□□ -0.28
TUBE1-202ENST00000368662 CXCL10P02778 98 aa13.29□□□□□ -0.28
TUBE1-202ENST00000368662 UCHL3P15374 230 aa13.29□□□□□ -0.28
TUBE1-202ENST00000368662 AKAP5P24588 427 aa13.29□□□□□ -0.28
TUBE1-202ENST00000368662 PIK3CAP42336 1068 aa13.29□□□□□ -0.28
TUBE1-202ENST00000368662 XKR4Q5GH76 650 aa13.29□□□□□ -0.28
TUBE1-202ENST00000368662 WDR44Q5JSH3 913 aa13.29□□□□□ -0.28
TUBE1-202ENST00000368662 SLC24A5Q71RS6 500 aa13.29□□□□□ -0.28
TUBE1-202ENST00000368662 TRAPPC11Q7Z392 1133 aa13.29□□□□□ -0.28
TUBE1-202ENST00000368662 FMNL3Q8IVF7 1028 aa13.29□□□□□ -0.28
TUBE1-202ENST00000368662 EFCAB13Q8IY85 973 aa13.29□□□□□ -0.28
TUBE1-202ENST00000368662 LMO3Q8TAP4 145 aa13.29□□□□□ -0.28
TUBE1-202ENST00000368662 TAS1R2Q8TE23 839 aa13.29□□□□□ -0.28
TUBE1-202ENST00000368662 CPLX3Q8WVH0 158 aa13.29□□□□□ -0.28
TUBE1-202ENST00000368662 KIF12Q96FN5 646 aa13.29□□□□□ -0.28
TUBE1-202ENST00000368662 PANX2Q96RD6 677 aa13.29□□□□□ -0.28
TUBE1-202ENST00000368662 APOL6Q9BWW8 343 aa13.29□□□□□ -0.28
TUBE1-202ENST00000368662 PPP1R12CQ9BZL4 782 aa13.29□□□□□ -0.28
TUBE1-202ENST00000368662 TSPYL2Q9H2G4 693 aaPredicted RBP13.29□□□□□ -0.28
TUBE1-202ENST00000368662 GIT1Q9Y2X7 761 aa13.29□□□□□ -0.28
TUBE1-202ENST00000368662 CITO14578 2027 aa13.29□□□□□ -0.28
TUBE1-202ENST00000368662 UMODL1Q5DID0 1318 aa13.29□□□□□ -0.28
TUBE1-202ENST00000368662 TANC1Q9C0D5 1861 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 MGEA5O60502 916 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 NOL4O94818 638 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 EOMESO95936 686 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 KCNE1P15382 129 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 EN2P19622 333 aaPredicted RBP13.28□□□□□ -0.28
TUBE1-202ENST00000368662 KRT9P35527 623 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 FXR1P51114 621 aaKnown RBP eCLIP13.28□□□□□ -0.28
TUBE1-202ENST00000368662 TRPC3Q13507 836 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 LRRC8AQ8IWT6 810 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 TC2NQ8N9U0 490 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 WNT8AQ9H1J5 351 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 GANQ9H2C0 597 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 RNF216Q9NWF9 866 aaPredicted RBP13.28□□□□□ -0.28
TUBE1-202ENST00000368662 ITGA11Q9UKX5 1188 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 MYO6Q9UM54 1294 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 R3HCC1Q9Y3T6 440 aaKnown RBP13.28□□□□□ -0.28
TUBE1-202ENST00000368662 RALGAPA2Q2PPJ7 1873 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 MEFVO15553 781 aaPredicted RBP13.28□□□□□ -0.28
TUBE1-202ENST00000368662 HLA-DRAP01903 254 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 NFICP08651 508 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 ACTN1P12814 892 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 ADKP55263 362 aaKnown RBP13.28□□□□□ -0.28
TUBE1-202ENST00000368662 CCL23P55773 120 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 POLR2FP61218 127 aaKnown RBP13.28□□□□□ -0.28
TUBE1-202ENST00000368662 NCOA4Q13772 614 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 ARID5BQ14865 1188 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 GPNMBQ14956 572 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 DPY19L2P1Q6NXN4 242 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 CCDC112Q8NEF3 446 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 DBF4BQ8NFT6 615 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 OR8K1Q8NGG5 319 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 NT5C1BQ96P26 610 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 DNAJC7Q99615 494 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 SIX2Q9NPC8 291 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 ABHD10Q9NUJ1 306 aa13.28□□□□□ -0.28
TUBE1-202ENST00000368662 UBQLN1Q9UMX0 589 aaKnown RBP13.28□□□□□ -0.28
TUBE1-202ENST00000368662 KIAA0355O15063 1070 aa13.27□□□□□ -0.28
TUBE1-202ENST00000368662 EPHB6O15197 1021 aa13.27□□□□□ -0.28
TUBE1-202ENST00000368662 VNN1O95497 513 aa13.27□□□□□ -0.28
TUBE1-202ENST00000368662 TIMP1P01033 207 aa13.27□□□□□ -0.28
TUBE1-202ENST00000368662 CYP3A5P20815 502 aa13.27□□□□□ -0.28
TUBE1-202ENST00000368662 CYP2C18P33260 490 aa13.27□□□□□ -0.28
TUBE1-202ENST00000368662 BEST2Q8NFU1 509 aa13.27□□□□□ -0.28
TUBE1-202ENST00000368662 TAF4BQ92750 862 aa13.27□□□□□ -0.28
TUBE1-202ENST00000368662 SCLYQ96I15 445 aa13.27□□□□□ -0.28
TUBE1-202ENST00000368662 SPAG5Q96R06 1193 aa13.27□□□□□ -0.28
TUBE1-202ENST00000368662 NAA15Q9BXJ9 866 aaKnown RBP13.27□□□□□ -0.28
TUBE1-202ENST00000368662 RNF39Q9H2S5 420 aa13.27□□□□□ -0.28
TUBE1-202ENST00000368662 SLC38A7Q9NVC3 462 aa13.27□□□□□ -0.28
TUBE1-202ENST00000368662 ANK1P16157 1881 aa13.27□□□□□ -0.29
TUBE1-202ENST00000368662 SMIM28A0A1B0GU29 152 aa13.27□□□□□ -0.29
TUBE1-202ENST00000368662 C9IYK1 514 aa13.27□□□□□ -0.29
TUBE1-202ENST00000368662 FAM189BP81408 668 aa13.27□□□□□ -0.29
TUBE1-202ENST00000368662 GCNT1Q02742 428 aa13.27□□□□□ -0.29
TUBE1-202ENST00000368662 ZBTB6Q15916 424 aa13.27□□□□□ -0.29
TUBE1-202ENST00000368662 SGSM1Q2NKQ1 1148 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms