RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 RTP2Q5QGT7 225 aa11.63□□□□□ -0.55
TUBE1-201ENST00000368657 C20orf194Q5TEA3 1177 aa11.63□□□□□ -0.55
TUBE1-201ENST00000368657 SLC23A3Q6PIS1 610 aa11.63□□□□□ -0.55
TUBE1-201ENST00000368657 ZNF410Q86VK4 478 aa11.63□□□□□ -0.55
TUBE1-201ENST00000368657 PIGKQ92643 395 aa11.63□□□□□ -0.55
TUBE1-201ENST00000368657 GPR88Q9GZN0 384 aa11.63□□□□□ -0.55
TUBE1-201ENST00000368657 KIAA1522Q9P206 1035 aaPredicted RBP11.63□□□□□ -0.55
TUBE1-201ENST00000368657 PCDHA6Q9UN73 950 aa11.63□□□□□ -0.55
TUBE1-201ENST00000368657 PCDHGA4Q9Y5G9 962 aa11.63□□□□□ -0.55
TUBE1-201ENST00000368657 PCDHA8Q9Y5H6 950 aa11.63□□□□□ -0.55
TUBE1-201ENST00000368657 BAZ2BQ9UIF8 2168 aaKnown RBP11.62□□□□□ -0.55
TUBE1-201ENST00000368657 SF3B1O75533 1304 aaKnown RBP eCLIP11.62□□□□□ -0.557e-6■■■■■ 70.2
TUBE1-201ENST00000368657 A0A087WZ62 844 aa11.62□□□□□ -0.55
TUBE1-201ENST00000368657 ARL5CA6NH57 179 aa11.62□□□□□ -0.55
TUBE1-201ENST00000368657 HEPACAM2A8MVW5 462 aa11.62□□□□□ -0.55
TUBE1-201ENST00000368657 B8ZZF3 427 aa11.62□□□□□ -0.55
TUBE1-201ENST00000368657 F8W810 466 aa11.62□□□□□ -0.55
TUBE1-201ENST00000368657 FTH1P19P0C7X4 201 aa11.62□□□□□ -0.55
TUBE1-201ENST00000368657 ITGA4P13612 1032 aa11.62□□□□□ -0.55
TUBE1-201ENST00000368657 CSRP3P50461 194 aa11.62□□□□□ -0.55
TUBE1-201ENST00000368657 DNM2P50570 870 aa11.62□□□□□ -0.55
TUBE1-201ENST00000368657 FCHO2Q0JRZ9 810 aa11.62□□□□□ -0.55
TUBE1-201ENST00000368657 PTPAQ15257 358 aa11.62□□□□□ -0.55
TUBE1-201ENST00000368657 MAPK6Q16659 721 aa11.62□□□□□ -0.55
TUBE1-201ENST00000368657 CEP55Q53EZ4 464 aa11.62□□□□□ -0.55
TUBE1-201ENST00000368657 CYP4A22Q5TCH4 519 aa11.62□□□□□ -0.55
TUBE1-201ENST00000368657 PKN3Q6P5Z2 889 aa11.62□□□□□ -0.55
TUBE1-201ENST00000368657 FAM181AQ8N9Y4 354 aa11.62□□□□□ -0.55
TUBE1-201ENST00000368657 TMEM209Q96SK2 561 aa11.62□□□□□ -0.55
TUBE1-201ENST00000368657 FDXACB1Q9BRP7 624 aaPredicted RBP11.62□□□□□ -0.55
TUBE1-201ENST00000368657 POLMQ9NP87 494 aaPredicted RBP11.62□□□□□ -0.55
TUBE1-201ENST00000368657 SALL3Q9BXA9 1300 aa11.61□□□□□ -0.55
TUBE1-201ENST00000368657 ARHGEF37A1IGU5 675 aa11.61□□□□□ -0.55
TUBE1-201ENST00000368657 TRABD2BA6NFA1 517 aa11.61□□□□□ -0.55
TUBE1-201ENST00000368657 DDX39AO00148 427 aaKnown RBP11.61□□□□□ -0.55
TUBE1-201ENST00000368657 MEIS1O00470 390 aa11.61□□□□□ -0.55
TUBE1-201ENST00000368657 NRG2O14511 850 aaPredicted RBP11.61□□□□□ -0.55
TUBE1-201ENST00000368657 APBB3O95704 486 aa11.61□□□□□ -0.55
TUBE1-201ENST00000368657 LRG1P02750 347 aa11.61□□□□□ -0.55
TUBE1-201ENST00000368657 DHPSP49366 369 aaPredicted RBP11.61□□□□□ -0.55
TUBE1-201ENST00000368657 SLC14A1Q13336 389 aa11.61□□□□□ -0.55
TUBE1-201ENST00000368657 LRRC69Q6ZNQ3 347 aa11.61□□□□□ -0.55
TUBE1-201ENST00000368657 TOGARAM2Q6ZUX3 1019 aa11.61□□□□□ -0.55
TUBE1-201ENST00000368657 PDZD4Q76G19 769 aaPredicted RBP11.61□□□□□ -0.55
TUBE1-201ENST00000368657 TMPRSS7Q7RTY8 843 aa11.61□□□□□ -0.55
TUBE1-201ENST00000368657 HAUS6Q7Z4H7 955 aa11.61□□□□□ -0.55
TUBE1-201ENST00000368657 CEP57Q86XR8 500 aa11.61□□□□□ -0.55
TUBE1-201ENST00000368657 SYT12Q8IV01 421 aa11.61□□□□□ -0.55
TUBE1-201ENST00000368657 PNPLA1Q8N8W4 532 aa11.61□□□□□ -0.55
TUBE1-201ENST00000368657 WBP1Q96G27 269 aa11.61□□□□□ -0.55
TUBE1-201ENST00000368657 ZSWIM3Q96MP5 696 aa11.61□□□□□ -0.55
TUBE1-201ENST00000368657 CORO1BQ9BR76 489 aa11.61□□□□□ -0.55
TUBE1-201ENST00000368657 KRTAP3-3Q9BYR6 98 aa11.61□□□□□ -0.55
TUBE1-201ENST00000368657 KRTAP3-2Q9BYR7 98 aa11.61□□□□□ -0.55
TUBE1-201ENST00000368657 KRT23Q9C075 422 aa11.61□□□□□ -0.55
TUBE1-201ENST00000368657 CHMP4BQ9H444 224 aaKnown RBP11.61□□□□□ -0.55
TUBE1-201ENST00000368657 MBD1Q9UIS9 605 aaPredicted RBP11.61□□□□□ -0.55
TUBE1-201ENST00000368657 MYH9P35579 1960 aaKnown RBP11.61□□□□□ -0.55
TUBE1-201ENST00000368657 ABCA7Q8IZY2 2146 aa11.6□□□□□ -0.55
TUBE1-201ENST00000368657 THADAQ6YHU6 1953 aa11.6□□□□□ -0.55
TUBE1-201ENST00000368657 TNFRSF10BO14763 440 aa11.6□□□□□ -0.55
TUBE1-201ENST00000368657 PSAPP07602 524 aa11.6□□□□□ -0.55
TUBE1-201ENST00000368657 CD59P13987 128 aa11.6□□□□□ -0.55
TUBE1-201ENST00000368657 OR1D2P34982 312 aa11.6□□□□□ -0.55
TUBE1-201ENST00000368657 GRSF1Q12849 480 aaKnown RBP eCLIP11.6□□□□□ -0.55
TUBE1-201ENST00000368657 ARHGAP29Q52LW3 1261 aa11.6□□□□□ -0.55
TUBE1-201ENST00000368657 GPR155Q7Z3F1 870 aa11.6□□□□□ -0.55
TUBE1-201ENST00000368657 TICAM2Q86XR7 235 aa11.6□□□□□ -0.55
TUBE1-201ENST00000368657 SMAP1Q8IYB5 467 aaPredicted RBP11.6□□□□□ -0.55
TUBE1-201ENST00000368657 ZSCAN18Q8TBC5 510 aaPredicted RBP11.6□□□□□ -0.55
TUBE1-201ENST00000368657 SPATA18Q8TC71 538 aa11.6□□□□□ -0.55
TUBE1-201ENST00000368657 TCEAL4Q96EI5 215 aa11.6□□□□□ -0.55
TUBE1-201ENST00000368657 RRP36Q96EU6 259 aaKnown RBP11.6□□□□□ -0.55
TUBE1-201ENST00000368657 FCRL3Q96P31 734 aaPredicted RBP11.6□□□□□ -0.55
TUBE1-201ENST00000368657 GAD1Q99259 594 aa11.6□□□□□ -0.55
TUBE1-201ENST00000368657 ZBTB40Q9NUA8 1239 aa11.6□□□□□ -0.55
TUBE1-201ENST00000368657 AGPAT5Q9NUQ2 364 aa11.6□□□□□ -0.55
TUBE1-201ENST00000368657 MIOSQ9NXC5 875 aa11.6□□□□□ -0.55
TUBE1-201ENST00000368657 PCDHA10Q9Y5I2 948 aa11.6□□□□□ -0.55
TUBE1-201ENST00000368657 COL12A1Q99715 3063 aa11.59□□□□□ -0.55
TUBE1-201ENST00000368657 PTPN13Q12923 2485 aa11.59□□□□□ -0.55
TUBE1-201ENST00000368657 ENO4A6NNW6 628 aa11.59□□□□□ -0.55
TUBE1-201ENST00000368657 DHX15O43143 795 aaKnown RBP11.59□□□□□ -0.55
TUBE1-201ENST00000368657 ADAM12O43184 909 aa11.59□□□□□ -0.55
TUBE1-201ENST00000368657 KRT38O76015 456 aa11.59□□□□□ -0.55
TUBE1-201ENST00000368657 SMARCA1P28370 1054 aa11.59□□□□□ -0.55
TUBE1-201ENST00000368657 SCNN1GP51170 649 aa11.59□□□□□ -0.55
TUBE1-201ENST00000368657 DGKEP52429 567 aa11.59□□□□□ -0.55
TUBE1-201ENST00000368657 ELAVL2Q12926 359 aaKnown RBP11.59□□□□□ -0.55
TUBE1-201ENST00000368657 SEC23AQ15436 765 aa11.59□□□□□ -0.55
TUBE1-201ENST00000368657 COLEC12Q5KU26 742 aa11.59□□□□□ -0.55
TUBE1-201ENST00000368657 UBXN11Q5T124 520 aa11.59□□□□□ -0.55
TUBE1-201ENST00000368657 FAM171A1Q5VUB5 890 aa11.59□□□□□ -0.55
TUBE1-201ENST00000368657 ZNF746Q6NUN9 644 aaPredicted RBP11.59□□□□□ -0.55
TUBE1-201ENST00000368657 SYT13Q7L8C5 426 aa11.59□□□□□ -0.55
TUBE1-201ENST00000368657 NIPA1Q7RTP0 329 aa11.59□□□□□ -0.55
TUBE1-201ENST00000368657 CEP76Q8TAP6 659 aa11.59□□□□□ -0.55
TUBE1-201ENST00000368657 PI4K2BQ8TCG2 481 aa11.59□□□□□ -0.55
TUBE1-201ENST00000368657 PIBF1Q8WXW3 757 aa11.59□□□□□ -0.55
TUBE1-201ENST00000368657 HHIPQ96QV1 700 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms