RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 ADPGKQ9BRR6 497 aa11.44□□□□□ -0.58
EBF3-202ENST00000368648 OSBPL7Q9BZF2 842 aa11.44□□□□□ -0.58
EBF3-202ENST00000368648 TMEM165Q9HC07 324 aa11.44□□□□□ -0.58
EBF3-202ENST00000368648 HEY2Q9UBP5 337 aa11.44□□□□□ -0.58
EBF3-202ENST00000368648 HACL1Q9UJ83 578 aa11.44□□□□□ -0.58
EBF3-202ENST00000368648 C2CD2Q9Y426 696 aa11.44□□□□□ -0.58
EBF3-202ENST00000368648 TNS2Q63HR2 1409 aa11.43□□□□□ -0.58
EBF3-202ENST00000368648 XRN1Q8IZH2 1706 aaKnown RBP11.43□□□□□ -0.58
EBF3-202ENST00000368648 ATP9AO75110 1047 aa11.43□□□□□ -0.58
EBF3-202ENST00000368648 GPC4O75487 556 aa11.43□□□□□ -0.58
EBF3-202ENST00000368648 ALX1Q15699 326 aa11.43□□□□□ -0.58
EBF3-202ENST00000368648 CPA5Q8WXQ8 436 aa11.43□□□□□ -0.58
EBF3-202ENST00000368648 INTS2Q9H0H0 1204 aaKnown RBP11.43□□□□□ -0.58
EBF3-202ENST00000368648 FAM49AQ9H0Q0 323 aaPredicted RBP11.43□□□□□ -0.58
EBF3-202ENST00000368648 GPBP1L1Q9HC44 474 aaPredicted RBP11.43□□□□□ -0.58
EBF3-202ENST00000368648 PHTF1Q9UMS5 762 aa11.43□□□□□ -0.58
EBF3-202ENST00000368648 PNPLA7Q6ZV29 1317 aa11.43□□□□□ -0.58
EBF3-202ENST00000368648 CRCPO75575 148 aa11.43□□□□□ -0.58
EBF3-202ENST00000368648 CACNA2D1P54289 1103 aa11.43□□□□□ -0.58
EBF3-202ENST00000368648 DMP1Q13316 513 aaPredicted RBP11.43□□□□□ -0.58
EBF3-202ENST00000368648 FAM160B1Q5W0V3 765 aa11.43□□□□□ -0.58
EBF3-202ENST00000368648 AGGF1Q8N302 714 aaeCLIP11.43□□□□□ -0.58
EBF3-202ENST00000368648 UPF1Q92900 1129 aaKnown RBP eCLIP11.43□□□□□ -0.58
EBF3-202ENST00000368648 PRMT6Q96LA8 375 aaPredicted RBP11.43□□□□□ -0.58
EBF3-202ENST00000368648 ACAP3Q96P50 834 aa11.43□□□□□ -0.58
EBF3-202ENST00000368648 WDR11Q9BZH6 1224 aa11.43□□□□□ -0.58
EBF3-202ENST00000368648 KDM4CQ9H3R0 1056 aa11.43□□□□□ -0.58
EBF3-202ENST00000368648 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.43□□□□□ -0.58
EBF3-202ENST00000368648 WTIPA6NIX2 430 aaPredicted RBP11.43□□□□□ -0.58
EBF3-202ENST00000368648 CPP00450 1065 aa11.43□□□□□ -0.58
EBF3-202ENST00000368648 DHX34Q14147 1143 aaKnown RBP11.43□□□□□ -0.58
EBF3-202ENST00000368648 ARHGEF6Q15052 776 aa11.43□□□□□ -0.58
EBF3-202ENST00000368648 TAF1BQ53T94 588 aaPredicted RBP11.43□□□□□ -0.58
EBF3-202ENST00000368648 IYDQ6PHW0 289 aa11.43□□□□□ -0.58
EBF3-202ENST00000368648 TMC3Q7Z5M5 1100 aa11.43□□□□□ -0.58
EBF3-202ENST00000368648 SNF8Q96H20 258 aa11.43□□□□□ -0.58
EBF3-202ENST00000368648 ZNF668Q96K58 619 aaPredicted RBP11.43□□□□□ -0.58
EBF3-202ENST00000368648 RPAP3Q9H6T3 665 aaPredicted RBP11.43□□□□□ -0.58
EBF3-202ENST00000368648 MAP3K6O95382 1288 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 MAPK7Q13164 816 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 ART3Q13508 389 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 KCTD21Q4G0X4 260 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 PPP6R3Q5H9R7 873 aaPredicted RBP11.42□□□□□ -0.58
EBF3-202ENST00000368648 DNAJC24Q6P3W2 148 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 ZBTB46Q86UZ6 589 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 CDC42EP4Q9H3Q1 356 aaKnown RBP11.42□□□□□ -0.58
EBF3-202ENST00000368648 KRT16P08779 473 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 HADHQ16836 314 aaKnown RBP11.42□□□□□ -0.58
EBF3-202ENST00000368648 SNX30Q5VWJ9 437 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 C16orf87Q6PH81 154 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 NUDCD3Q8IVD9 361 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 ADGRF4Q8IZF3 695 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 ICA1LQ8NDH6 482 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 DCAF4Q8WV16 495 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 PWWP2AQ96N64 755 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 TMEM117Q9H0C3 514 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 ARMCX1Q9P291 453 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 RGPD8O14715 1765 aaPredicted RBP11.42□□□□□ -0.58
EBF3-202ENST00000368648 PITPNM2Q9BZ72 1349 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 RSPH10B2B2RC85 870 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 PHF2O75151 1096 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 RSPH10BP0C881 870 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 CCND2P30279 289 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 ATICP31939 592 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 NBPF20Q3BBV1 942 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 CCDC14Q49A88 953 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 GRAMD4Q6IC98 578 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 NLRP9Q7RTR0 991 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 WDR75Q8IWA0 830 aaKnown RBP11.42□□□□□ -0.58
EBF3-202ENST00000368648 KIAA0895Q8NCT3 520 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 TATDN2Q93075 761 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 POP1Q99575 1024 aaKnown RBP11.42□□□□□ -0.58
EBF3-202ENST00000368648 TSSK1BQ9BXA7 367 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 VPS11Q9H270 941 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 SCINQ9Y6U3 715 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 CNTNAP5Q8WYK1 1306 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 KIF1AQ12756 1690 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 POLRMTO00411 1230 aaKnown RBP11.42□□□□□ -0.58
EBF3-202ENST00000368648 CCDC22O60826 627 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 DGKIO75912 1065 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 NDUFB10O96000 172 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 KRT4P19013 534 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 HUNKP57058 714 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 CXCL9Q07325 125 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 ZCWPW2Q504Y3 356 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 MEI1Q5TIA1 1274 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 TMEM270Q6UE05 265 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 ARID3BQ8IVW6 561 aaPredicted RBP11.42□□□□□ -0.58
EBF3-202ENST00000368648 CCNYQ8ND76 341 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 CDHR1Q96JP9 859 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 C7orf25Q9BPX7 421 aa11.42□□□□□ -0.58
EBF3-202ENST00000368648 WARS2Q9UGM6 360 aaKnown RBP11.42□□□□□ -0.58
EBF3-202ENST00000368648 APOBEC2Q9Y235 224 aaKnown RBP11.42□□□□□ -0.58
EBF3-202ENST00000368648 MED1Q15648 1581 aaPredicted RBP11.41□□□□□ -0.58
EBF3-202ENST00000368648 CCDC78A2IDD5 438 aa11.41□□□□□ -0.58
EBF3-202ENST00000368648 NEMP1O14524 444 aa11.41□□□□□ -0.58
EBF3-202ENST00000368648 SLC16A4O15374 487 aa11.41□□□□□ -0.58
EBF3-202ENST00000368648 DDNO94850 711 aaPredicted RBP11.41□□□□□ -0.58
EBF3-202ENST00000368648 VHLP40337 213 aa11.41□□□□□ -0.58
EBF3-202ENST00000368648 NFX1Q12986 1120 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms