RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 MAPK13O15264 365 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 SERPIND1P05546 499 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 PDGFRAP16234 1089 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 ETFBP38117 255 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 RBP5P82980 135 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 GLE1Q53GS7 698 aaKnown RBP13.63□□□□□ -0.23
PTPRK-207ENST00000368226 RFFLQ8WZ73 363 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 MTA3Q9BTC8 594 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 UNC45AQ9H3U1 944 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 CASS4Q9NQ75 786 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 PRG3Q9Y2Y8 225 aaPredicted RBP13.63□□□□□ -0.23
PTPRK-207ENST00000368226 FMO5P49326 533 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 RPS6P62753 249 aaKnown RBP13.63□□□□□ -0.23
PTPRK-207ENST00000368226 NFIAQ12857 509 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 MDH1BQ5I0G3 518 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 IER5Q5VY09 327 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 STYK1Q6J9G0 422 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 EMBQ6PCB8 327 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 ARL8AQ96BM9 186 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 RNPC3Q96LT9 517 aaKnown RBP13.63□□□□□ -0.23
PTPRK-207ENST00000368226 LBHD1Q9BQE6 289 aaPredicted RBP13.63□□□□□ -0.23
PTPRK-207ENST00000368226 MUC3BQ9H195 1237 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 RTN2O75298 545 aa13.62□□□□□ -0.23
PTPRK-207ENST00000368226 SLC9A1P19634 815 aa13.62□□□□□ -0.23
PTPRK-207ENST00000368226 IL31Q6EBC2 164 aa13.62□□□□□ -0.23
PTPRK-207ENST00000368226 TRIM51Q9BSJ1 452 aa13.62□□□□□ -0.23
PTPRK-207ENST00000368226 KATNAL1Q9BW62 490 aa13.62□□□□□ -0.23
PTPRK-207ENST00000368226 TRIM55Q9BYV6 548 aa13.62□□□□□ -0.23
PTPRK-207ENST00000368226 FBXL5Q9UKA1 691 aa13.62□□□□□ -0.23
PTPRK-207ENST00000368226 APOBEC2Q9Y235 224 aaKnown RBP13.62□□□□□ -0.23
PTPRK-207ENST00000368226 POLR1AO95602 1720 aaPredicted RBP13.62□□□□□ -0.23
PTPRK-207ENST00000368226 GRIN3BO60391 1043 aa13.62□□□□□ -0.23
PTPRK-207ENST00000368226 KLHL38Q2WGJ6 581 aa13.62□□□□□ -0.23
PTPRK-207ENST00000368226 RFWD2Q8NHY2 731 aa13.62□□□□□ -0.23
PTPRK-207ENST00000368226 SLC7A5P2Q9GIP4 190 aa13.62□□□□□ -0.23
PTPRK-207ENST00000368226 SLC37A4O43826 429 aa13.62□□□□□ -0.23
PTPRK-207ENST00000368226 PAN2Q504Q3 1202 aaKnown RBP13.62□□□□□ -0.23
PTPRK-207ENST00000368226 ITPRIPL1Q6GPH6 555 aa13.62□□□□□ -0.23
PTPRK-207ENST00000368226 WDR75Q8IWA0 830 aaKnown RBP13.62□□□□□ -0.23
PTPRK-207ENST00000368226 SLC25A41Q8N5S1 370 aa13.62□□□□□ -0.23
PTPRK-207ENST00000368226 L3MBTL1Q9Y468 752 aa13.62□□□□□ -0.23
PTPRK-207ENST00000368226 CETPP11597 493 aa13.62□□□□□ -0.23
PTPRK-207ENST00000368226 EFHD1Q9BUP0 239 aa13.62□□□□□ -0.23
PTPRK-207ENST00000368226 MAGEB5Q9BZ81 275 aa13.62□□□□□ -0.23
PTPRK-207ENST00000368226 COG4Q9H9E3 785 aa13.62□□□□□ -0.23
PTPRK-207ENST00000368226 CYP4F11Q9HBI6 524 aa13.62□□□□□ -0.23
PTPRK-207ENST00000368226 TFR2Q9UP52 801 aa13.62□□□□□ -0.23
PTPRK-207ENST00000368226 A0A087WUV0 522 aaPredicted RBP13.61□□□□□ -0.23
PTPRK-207ENST00000368226 CHRNA3P32297 505 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 KRT80Q6KB66 452 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 SLC7A14Q8TBB6 771 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 WDR24Q96S15 920 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 CAPN11Q9UMQ6 739 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 TFRCP02786 760 aaKnown RBP13.61□□□□□ -0.23
PTPRK-207ENST00000368226 BARGINQ6ZT62 677 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 CCDC33Q8N5R6 958 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 GPRC5CQ9NQ84 441 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 GGT7Q9UJ14 662 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 FZD1Q9UP38 647 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 BRD2P25440 801 aaKnown RBP13.61□□□□□ -0.23
PTPRK-207ENST00000368226 GOLGA7BQ2TAP0 167 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 ACAD11Q709F0 780 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 EFHBQ8N7U6 833 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 BFARQ9NZS9 450 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 FAF1Q9UNN5 650 aaPredicted RBP13.61□□□□□ -0.23
PTPRK-207ENST00000368226 ITM2BQ9Y287 266 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 KPNA7A9QM74 516 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 E2F6O75461 281 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 TYK2P29597 1187 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 THPOP40225 353 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 DGKDQ16760 1214 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 C9orf131Q5VYM1 1079 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 ENOSF1Q7L5Y1 443 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 KIF2CQ99661 725 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 EPAS1Q99814 870 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 NUDT12Q9BQG2 462 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 GOLPH3Q9H4A6 298 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 ZFP69BQ9UJL9 534 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 TRAPPC3O43617 180 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 BRAFP15056 766 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 CATSPER3Q86XQ3 398 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 ATP11CQ8NB49 1132 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 TARS2Q9BW92 718 aaKnown RBP13.61□□□□□ -0.23
PTPRK-207ENST00000368226 DIP2AQ14689 1571 aa13.61□□□□□ -0.23
PTPRK-207ENST00000368226 EIF4E1BA6NMX2 242 aaKnown RBP13.6□□□□□ -0.23
PTPRK-207ENST00000368226 MAP3K7O43318 606 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 ATP8B1O43520 1251 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 HLA-DRAP01903 254 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 APRTP07741 180 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 YY1P25490 414 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 SOX11P35716 441 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 ARHGDIAP52565 204 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 AP3M2P53677 418 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 TRIM72Q6ZMU5 477 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 FBXO16Q8IX29 292 aaPredicted RBP13.6□□□□□ -0.23
PTPRK-207ENST00000368226 RFX5P48382 616 aaPredicted RBP13.6□□□□□ -0.23
PTPRK-207ENST00000368226 HSD17B4P51659 736 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 KCNB1Q14721 858 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 P3H1Q32P28 736 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 NBPF9Q3BBW0 867 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms