RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 HSD17B4P51659 736 aa13.16□□□□□ -0.3
PTPN7-202ENST00000367279 PLCB4Q15147 1175 aa13.16□□□□□ -0.3
PTPN7-202ENST00000367279 STYK1Q6J9G0 422 aa13.16□□□□□ -0.3
PTPN7-202ENST00000367279 TMEM161BQ8NDZ6 487 aa13.16□□□□□ -0.3
PTPN7-202ENST00000367279 GIMAP7Q8NHV1 300 aa13.16□□□□□ -0.3
PTPN7-202ENST00000367279 CD101Q93033 1021 aa13.16□□□□□ -0.3
PTPN7-202ENST00000367279 ABCF3Q9NUQ8 709 aa13.16□□□□□ -0.3
PTPN7-202ENST00000367279 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.16□□□□□ -0.3
PTPN7-202ENST00000367279 ZNF536O15090 1300 aa13.16□□□□□ -0.3
PTPN7-202ENST00000367279 O00370 1275 aa13.16□□□□□ -0.3
PTPN7-202ENST00000367279 HSPA1LP34931 641 aa13.16□□□□□ -0.3
PTPN7-202ENST00000367279 ACOT2P49753 483 aa13.16□□□□□ -0.3
PTPN7-202ENST00000367279 CNGA2Q16280 664 aa13.16□□□□□ -0.3
PTPN7-202ENST00000367279 WDR44Q5JSH3 913 aa13.16□□□□□ -0.3
PTPN7-202ENST00000367279 SPDYCQ5MJ68 293 aa13.16□□□□□ -0.3
PTPN7-202ENST00000367279 USP37Q86T82 979 aa13.16□□□□□ -0.3
PTPN7-202ENST00000367279 SRRM1Q8IYB3 904 aaKnown RBP13.16□□□□□ -0.3
PTPN7-202ENST00000367279 MORC4Q8TE76 937 aa13.16□□□□□ -0.3
PTPN7-202ENST00000367279 CLEC4DQ8WXI8 215 aa13.16□□□□□ -0.3
PTPN7-202ENST00000367279 SGSM3Q96HU1 749 aa13.16□□□□□ -0.3
PTPN7-202ENST00000367279 CNOT7Q9UIV1 285 aaKnown RBP13.16□□□□□ -0.3
PTPN7-202ENST00000367279 R3HDM2Q9Y2K5 976 aaKnown RBP13.16□□□□□ -0.3
PTPN7-202ENST00000367279 COL11A2P13942 1736 aaPredicted RBP13.16□□□□□ -0.3
PTPN7-202ENST00000367279 PI4K2BG5E9Z4 385 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 RALAP11233 206 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 PIK3CAP42336 1068 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 PGM5Q15124 567 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 SWSAP1Q6NVH7 229 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 CROCCP2Q86T23 111 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 CENPTQ96BT3 561 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 SNF8Q96H20 258 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 HERPUD2Q9BSE4 406 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 TPX2Q9ULW0 747 aaKnown RBP13.15□□□□□ -0.3
PTPN7-202ENST00000367279 UBIAD1Q9Y5Z9 338 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 BRAFP15056 766 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 STX2P32856 288 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 LIG4P49917 911 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 SIX1Q15475 284 aaPredicted RBP13.15□□□□□ -0.3
PTPN7-202ENST00000367279 CLEC16AQ2KHT3 1053 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 MTERF2Q49AM1 385 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 PCNX4Q63HM2 1172 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 ANO5Q75V66 913 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 TRPM8Q7Z2W7 1104 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 SUPT20HQ8NEM7 779 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 GH1P01241 217 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 MAPTP10636 758 aaKnown RBP13.15□□□□□ -0.3
PTPN7-202ENST00000367279 ATF7P17544 494 aaPredicted RBP13.15□□□□□ -0.3
PTPN7-202ENST00000367279 NCKAP1LP55160 1127 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 CYP24A1Q07973 514 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 C12orf56Q8IXR9 622 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 TAB3Q8N5C8 712 aaPredicted RBP13.15□□□□□ -0.3
PTPN7-202ENST00000367279 AKT1S1Q96B36 256 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 HAUS1Q96CS2 278 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 KDM4CQ9H3R0 1056 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 ANKFY1Q9P2R3 1169 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 STK38LQ9Y2H1 464 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 PCDHB4Q9Y5E5 795 aa13.15□□□□□ -0.3
PTPN7-202ENST00000367279 CNTNAP1P78357 1384 aa13.14□□□□□ -0.31
PTPN7-202ENST00000367279 PTGER2P43116 358 aa13.14□□□□□ -0.31
PTPN7-202ENST00000367279 TMED2Q15363 201 aa13.14□□□□□ -0.31
PTPN7-202ENST00000367279 TRMT10CQ7L0Y3 403 aaKnown RBP13.14□□□□□ -0.31
PTPN7-202ENST00000367279 GPD1LQ8N335 351 aa13.14□□□□□ -0.31
PTPN7-202ENST00000367279 TELO2Q9Y4R8 837 aa13.14□□□□□ -0.31
PTPN7-202ENST00000367279 BAATQ14032 418 aaPredicted RBP13.14□□□□□ -0.31
PTPN7-202ENST00000367279 SPDYE2Q495Y8 402 aa13.14□□□□□ -0.31
PTPN7-202ENST00000367279 SEZ6Q53EL9 994 aa13.14□□□□□ -0.31
PTPN7-202ENST00000367279 SWT1Q5T5J6 900 aaKnown RBP13.14□□□□□ -0.31
PTPN7-202ENST00000367279 TMEM270Q6UE05 265 aa13.14□□□□□ -0.31
PTPN7-202ENST00000367279 FAM47EQ6ZV65 393 aa13.14□□□□□ -0.31
PTPN7-202ENST00000367279 C4orf19Q8IY42 314 aa13.14□□□□□ -0.31
PTPN7-202ENST00000367279 MCOLN2Q8IZK6 566 aa13.14□□□□□ -0.31
PTPN7-202ENST00000367279 PSPC1Q8WXF1 523 aaKnown RBP13.14□□□□□ -0.31
PTPN7-202ENST00000367279 FAM212AQ96EL1 285 aa13.14□□□□□ -0.31
PTPN7-202ENST00000367279 LRRC19Q9H756 370 aa13.14□□□□□ -0.31
PTPN7-202ENST00000367279 UBOX5O94941 541 aa13.14□□□□□ -0.31
PTPN7-202ENST00000367279 CFHP08603 1231 aa13.14□□□□□ -0.31
PTPN7-202ENST00000367279 RPSAP08865 295 aaKnown RBP13.14□□□□□ -0.31
PTPN7-202ENST00000367279 GPC3P51654 580 aa13.14□□□□□ -0.31
PTPN7-202ENST00000367279 JAK3P52333 1124 aa13.14□□□□□ -0.31
PTPN7-202ENST00000367279 SLC39A4Q6P5W5 647 aa13.14□□□□□ -0.31
PTPN7-202ENST00000367279 MAP4K3Q8IVH8 894 aa13.14□□□□□ -0.31
PTPN7-202ENST00000367279 KIF2BQ8N4N8 673 aa13.14□□□□□ -0.31
PTPN7-202ENST00000367279 IFT74Q96LB3 600 aa13.14□□□□□ -0.31
PTPN7-202ENST00000367279 SYNPO2Q9UMS6 1093 aa13.14□□□□□ -0.31
PTPN7-202ENST00000367279 POC1B-GALNT4F8VUJ3 575 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 ASAP2O43150 1006 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 MTA2O94776 668 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 ITIH2P19823 946 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 MTMR2Q13614 643 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 CYP1B1Q16678 543 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 BRDTQ58F21 947 aaPredicted RBP13.13□□□□□ -0.31
PTPN7-202ENST00000367279 IZUMO3Q5VZ72 239 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 FLAD1Q8NFF5 587 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 GRK7Q8WTQ7 553 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 ACSF2Q96CM8 615 aaPredicted RBP13.13□□□□□ -0.31
PTPN7-202ENST00000367279 PDCD2LQ9BRP1 358 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 AAASQ9NRG9 546 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 NKIRAS1Q9NYS0 192 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 ADAM22Q9P0K1 906 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 PCDHA10Q9Y5I2 948 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms