RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 COL4A3BPQ9Y5P4 624 aa12.3□□□□□ -0.44
CSNK1E-202ENST00000366216 NPHP3-ACAD11A0A0J9YXS1 232 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 ARHGEF35A5YM69 484 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 ESPNB1AK53 854 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 FGFR1OPO95684 399 aaKnown RBP12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 RFX1P22670 979 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 EEF1GP26641 437 aaKnown RBP12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 GSDMDP57764 484 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 FAM189BP81408 668 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 LRRC63Q05C16 580 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 DSC3Q14574 896 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 NR1I3Q14994 352 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 FILIP1LQ4L180 1135 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 KIAA0319Q5VV43 1072 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 ANKRD40Q6AI12 368 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 OTOP3Q7RTS5 596 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 CCDC186Q7Z3E2 898 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 FAM114A1Q8IWE2 563 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 NME8Q8N427 588 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 SUMF1Q8NBK3 374 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 HPS3Q969F9 1004 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 NAP1L5Q96NT1 182 aaPredicted RBP12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 CASD1Q96PB1 797 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 DUSP9Q99956 384 aaKnown RBP12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 TIPINQ9BVW5 301 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 ATP6V0A4Q9HBG4 840 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 JPH1Q9HDC5 661 aaPredicted RBP12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 ANKEF1Q9NU02 776 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 SEL1LQ9UBV2 794 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 WNT16Q9UBV4 365 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 SLC9A2Q9UBY0 812 aa12.29□□□□□ -0.44
CSNK1E-202ENST00000366216 FASNP49327 2511 aaKnown RBP12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 SMIM35A0A1B0GVV1 85 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 KRBA1A5PL33 1030 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 TRIM49BA6NDI0 452 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 NARSO43776 548 aaKnown RBP12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 TBCAO75347 108 aaKnown RBP12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 RPS6KA5O75582 802 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 ATG7O95352 703 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 PSAPP07602 524 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 CFHP08603 1231 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 CA8P35219 290 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 ZNF131P52739 623 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 ATXN1P54253 815 aaKnown RBP12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 TBC1D8BQ0IIM8 1120 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 TCP11X2Q5H9J9 407 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 ODR4Q5SWX8 454 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 IRF2BP1Q8IU81 584 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 VSTM4Q8IW00 320 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 KIAA0319LQ8IZA0 1049 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 LRRC43Q8N309 656 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 CSGALNACT2Q8N6G5 542 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 TSG101Q99816 390 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 SRRTQ9BXP5 876 aaKnown RBP12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 TMEM117Q9H0C3 514 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 ELAC1Q9H777 363 aaKnown RBP12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 OLFML3Q9NRN5 406 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 INTS13Q9NVM9 706 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 IGSF9Q9P2J2 1179 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 ST3GAL5Q9UNP4 418 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 GINS2Q9Y248 185 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 FARP1Q9Y4F1 1045 aaPredicted RBP12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 FRYQ5TBA9 3013 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 PKD1L2Q7Z442 2459 aa12.28□□□□□ -0.44
CSNK1E-202ENST00000366216 TDRD15B5MCY1 1934 aaKnown RBP12.27□□□□□ -0.44
CSNK1E-202ENST00000366216 COL4A3Q01955 1670 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 ZBTB42B2RXF5 422 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 KCNJ18B7U540 433 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 ZBTB39O15060 712 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 FAM13AO94988 1023 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 CXCL14O95715 111 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 EPCAMP16422 314 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 YWHABP31946 246 aaKnown RBP12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 RARRES1P49788 294 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 ACTR2P61160 394 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 KCNJ12Q14500 433 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 BMS1Q14692 1282 aaKnown RBP12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 KRT31Q15323 416 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 BMT2Q1RMZ1 405 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 ZCWPW2Q504Y3 356 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 HSP90AA4PQ58FG1 418 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 MIS18BP1Q6P0N0 1132 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 MTHFD1LQ6UB35 978 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 ABHD15Q6UXT9 468 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 TMC5Q6UXY8 1006 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 CCDC149Q6ZUS6 474 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 EPM2AIP1Q7L775 607 aaPredicted RBP12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 TMC6Q7Z403 805 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 FAM228AQ86W67 206 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 TMEM173Q86WV6 379 aaPredicted RBP12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 SFR1Q86XK3 245 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 SLC39A11Q8N1S5 342 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 GPR161Q8N6U8 529 aaKnown RBP12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 SCFD1Q8WVM8 642 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 AUTS2Q8WXX7 1259 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 PPP1R16BQ96T49 567 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 TBC1D17Q9HA65 648 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 PARVGQ9HBI0 331 aa12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 NCDNQ9UBB6 729 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms