RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ZCRB1Q8TBF4 217 aaKnown RBP6.06□□□□□ -1.44
RNU4-28P-201ENST00000364739 PROKR1Q8TCW9 393 aa6.06□□□□□ -1.44
RNU4-28P-201ENST00000364739 COA7Q96BR5 231 aa6.06□□□□□ -1.44
RNU4-28P-201ENST00000364739 ZSWIM1Q9BR11 485 aa6.06□□□□□ -1.44
RNU4-28P-201ENST00000364739 SLC46A2Q9BY10 475 aa6.06□□□□□ -1.44
RNU4-28P-201ENST00000364739 FZD1Q9UP38 647 aa6.06□□□□□ -1.44
RNU4-28P-201ENST00000364739 AATKQ6ZMQ8 1374 aa6.06□□□□□ -1.44
RNU4-28P-201ENST00000364739 CENPVL1A0A0U1RR11 272 aa6.05□□□□□ -1.44
RNU4-28P-201ENST00000364739 UNC119BA6NIH7 251 aa6.05□□□□□ -1.44
RNU4-28P-201ENST00000364739 POMCP01189 267 aa6.05□□□□□ -1.44
RNU4-28P-201ENST00000364739 LAG3P18627 525 aa6.05□□□□□ -1.44
RNU4-28P-201ENST00000364739 KRTAP1-1Q07627 177 aa6.05□□□□□ -1.44
RNU4-28P-201ENST00000364739 UAP1L1Q3KQV9 507 aa6.05□□□□□ -1.44
RNU4-28P-201ENST00000364739 OTUD7BQ6GQQ9 843 aa6.05□□□□□ -1.44
RNU4-28P-201ENST00000364739 RHOUQ7L0Q8 258 aa6.05□□□□□ -1.44
RNU4-28P-201ENST00000364739 SYNE4Q8N205 404 aa6.05□□□□□ -1.44
RNU4-28P-201ENST00000364739 DCBLD1Q8N8Z6 715 aa6.05□□□□□ -1.44
RNU4-28P-201ENST00000364739 CYFIP2Q96F07 1278 aa6.05□□□□□ -1.44
RNU4-28P-201ENST00000364739 TMX3Q96JJ7 454 aa6.05□□□□□ -1.44
RNU4-28P-201ENST00000364739 GSTO2Q9H4Y5 243 aa6.05□□□□□ -1.44
RNU4-28P-201ENST00000364739 SLITRK6Q9H5Y7 841 aa6.05□□□□□ -1.44
RNU4-28P-201ENST00000364739 MANSC1Q9H8J5 431 aa6.05□□□□□ -1.44
RNU4-28P-201ENST00000364739 SAP30BPQ9UHR5 308 aaKnown RBP6.05□□□□□ -1.44
RNU4-28P-201ENST00000364739 NOP58Q9Y2X3 529 aaKnown RBP6.05□□□□□ -1.44
RNU4-28P-201ENST00000364739 PCDHB1Q9Y5F3 818 aa6.05□□□□□ -1.44
RNU4-28P-201ENST00000364739 RNASET2O00584 256 aaKnown RBP6.04□□□□□ -1.44
RNU4-28P-201ENST00000364739 KIAA0391O15091 583 aaKnown RBP6.04□□□□□ -1.44
RNU4-28P-201ENST00000364739 ABHD16AO95870 558 aa6.04□□□□□ -1.44
RNU4-28P-201ENST00000364739 ELANEP08246 267 aa6.04□□□□□ -1.44
RNU4-28P-201ENST00000364739 SBK3P0C264 359 aa6.04□□□□□ -1.44
RNU4-28P-201ENST00000364739 IBSPP21815 317 aaPredicted RBP6.04□□□□□ -1.44
RNU4-28P-201ENST00000364739 WASP42768 502 aa6.04□□□□□ -1.44
RNU4-28P-201ENST00000364739 SLC16A1P53985 500 aa6.04□□□□□ -1.44
RNU4-28P-201ENST00000364739 ZNF280AP59817 542 aaPredicted RBP6.04□□□□□ -1.44
RNU4-28P-201ENST00000364739 FSTL1Q12841 308 aa6.04□□□□□ -1.44
RNU4-28P-201ENST00000364739 AGAP9Q5VTM2 703 aa6.04□□□□□ -1.44
RNU4-28P-201ENST00000364739 RSPH3Q86UC2 560 aa6.04□□□□□ -1.44
RNU4-28P-201ENST00000364739 CPEB3Q8NE35 698 aaKnown RBP6.04□□□□□ -1.44
RNU4-28P-201ENST00000364739 OR56A1Q8NGH5 318 aa6.04□□□□□ -1.44
RNU4-28P-201ENST00000364739 CASKIN2Q8WXE0 1202 aa6.04□□□□□ -1.44
RNU4-28P-201ENST00000364739 SSH1Q8WYL5 1049 aa6.04□□□□□ -1.44
RNU4-28P-201ENST00000364739 HDAC10Q969S8 669 aa6.04□□□□□ -1.44
RNU4-28P-201ENST00000364739 LENG9Q96B70 501 aa6.04□□□□□ -1.44
RNU4-28P-201ENST00000364739 IKZF4Q9H2S9 585 aa6.04□□□□□ -1.44
RNU4-28P-201ENST00000364739 TDP1Q9NUW8 608 aa6.04□□□□□ -1.44
RNU4-28P-201ENST00000364739 ATP11BQ9Y2G3 1177 aa6.04□□□□□ -1.44
RNU4-28P-201ENST00000364739 ZRANB2O95218 330 aaKnown RBP eCLIP6.03□□□□□ -1.44
RNU4-28P-201ENST00000364739 RESTQ13127 1097 aa6.03□□□□□ -1.44
RNU4-28P-201ENST00000364739 BEAN1Q3B7T3 259 aa6.03□□□□□ -1.44
RNU4-28P-201ENST00000364739 GJC2Q5T442 439 aaPredicted RBP6.03□□□□□ -1.44
RNU4-28P-201ENST00000364739 KCNV1Q6PIU1 500 aa6.03□□□□□ -1.44
RNU4-28P-201ENST00000364739 LRRC55Q6ZSA7 311 aa6.03□□□□□ -1.44
RNU4-28P-201ENST00000364739 SEM1Q6ZVN7 128 aa6.03□□□□□ -1.44
RNU4-28P-201ENST00000364739 MIGA2Q7L4E1 593 aa6.03□□□□□ -1.44
RNU4-28P-201ENST00000364739 MYEOVQ96EZ4 313 aa6.03□□□□□ -1.44
RNU4-28P-201ENST00000364739 TTPALQ9BTX7 342 aa6.03□□□□□ -1.44
RNU4-28P-201ENST00000364739 KLHL11Q9NVR0 708 aa6.03□□□□□ -1.44
RNU4-28P-201ENST00000364739 HS3ST4Q9Y661 456 aa6.03□□□□□ -1.44
RNU4-28P-201ENST00000364739 POLR2AP24928 1970 aaKnown RBP6.03□□□□□ -1.44
RNU4-28P-201ENST00000364739 SLC6A4P31645 630 aa6.02□□□□□ -1.45
RNU4-28P-201ENST00000364739 NOMO3P69849 1222 aa6.02□□□□□ -1.45
RNU4-28P-201ENST00000364739 CREMQ03060 361 aa6.02□□□□□ -1.45
RNU4-28P-201ENST00000364739 NOMO2Q5JPE7 1267 aa6.02□□□□□ -1.45
RNU4-28P-201ENST00000364739 LDLRAD3Q86YD5 345 aa6.02□□□□□ -1.45
RNU4-28P-201ENST00000364739 PLXDC1Q8IUK5 500 aa6.02□□□□□ -1.45
RNU4-28P-201ENST00000364739 RHOT2Q8IXI1 618 aa6.02□□□□□ -1.45
RNU4-28P-201ENST00000364739 DRC7Q8IY82 874 aa6.02□□□□□ -1.45
RNU4-28P-201ENST00000364739 ULK2Q8IYT8 1036 aa6.02□□□□□ -1.45
RNU4-28P-201ENST00000364739 CHFRQ96EP1 664 aa6.02□□□□□ -1.45
RNU4-28P-201ENST00000364739 MARS2Q96GW9 593 aaKnown RBP6.02□□□□□ -1.45
RNU4-28P-201ENST00000364739 CLPTM1LQ96KA5 538 aa6.02□□□□□ -1.45
RNU4-28P-201ENST00000364739 DMRTA2Q96SC8 542 aa6.02□□□□□ -1.45
RNU4-28P-201ENST00000364739 ADAM2Q99965 735 aa6.02□□□□□ -1.45
RNU4-28P-201ENST00000364739 WDR11Q9BZH6 1224 aa6.02□□□□□ -1.45
RNU4-28P-201ENST00000364739 SLC13A1Q9BZW2 595 aa6.02□□□□□ -1.45
RNU4-28P-201ENST00000364739 USP25Q9UHP3 1055 aa6.02□□□□□ -1.45
RNU4-28P-201ENST00000364739 FPGT-TNNI3KV9GXZ4 949 aa6.02□□□□□ -1.45
RNU4-28P-201ENST00000364739 CDHR4A6H8M9 788 aa6.01□□□□□ -1.45
RNU4-28P-201ENST00000364739 DIRC3C9JPN6 131 aa6.01□□□□□ -1.45
RNU4-28P-201ENST00000364739 CTXN1P60606 82 aa6.01□□□□□ -1.45
RNU4-28P-201ENST00000364739 TGFB2P61812 414 aa6.01□□□□□ -1.45
RNU4-28P-201ENST00000364739 CDC42EP1Q00587 391 aa6.01□□□□□ -1.45
RNU4-28P-201ENST00000364739 TP53BP2Q13625 1128 aa6.01□□□□□ -1.45
RNU4-28P-201ENST00000364739 PTPAQ15257 358 aa6.01□□□□□ -1.45
RNU4-28P-201ENST00000364739 LY6G5CQ5SRR4 150 aa6.01□□□□□ -1.45
RNU4-28P-201ENST00000364739 LAIR1Q6GTX8 287 aa6.01□□□□□ -1.45
RNU4-28P-201ENST00000364739 MAPKAPK5Q8IW41 473 aa6.01□□□□□ -1.45
RNU4-28P-201ENST00000364739 IFI44Q8TCB0 444 aa6.01□□□□□ -1.45
RNU4-28P-201ENST00000364739 STAG1Q8WVM7 1258 aa6.01□□□□□ -1.45
RNU4-28P-201ENST00000364739 VRK1Q99986 396 aaPredicted RBP6.01□□□□□ -1.45
RNU4-28P-201ENST00000364739 C11orf54Q9H0W9 315 aaPredicted RBP6.01□□□□□ -1.45
RNU4-28P-201ENST00000364739 DKK2Q9UBU2 259 aa6.01□□□□□ -1.45
RNU4-28P-201ENST00000364739 COL4A3Q01955 1670 aa6.01□□□□□ -1.45
RNU4-28P-201ENST00000364739 hCG_2014768A0A024R1R8 64 aa6□□□□□ -1.45
RNU4-28P-201ENST00000364739 A0A1B0GTW7 788 aa6□□□□□ -1.45
RNU4-28P-201ENST00000364739 LRRC14BA6NHZ5 514 aa6□□□□□ -1.45
RNU4-28P-201ENST00000364739 TMEM200CA6NKL6 621 aa6□□□□□ -1.45
RNU4-28P-201ENST00000364739 GRM6O15303 877 aa6□□□□□ -1.45
RNU4-28P-201ENST00000364739 TEX33O43247 280 aa6□□□□□ -1.45
RNU4-28P-201ENST00000364739 SNUPNO95149 360 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms