RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 TBC1D17Q9HA65 648 aa8.98□□□□□ -0.97
RNU4-59P-201ENST00000364447 GOLGA2P5Q9HBQ8 144 aa8.98□□□□□ -0.97
RNU4-59P-201ENST00000364447 KMT5AQ9NQR1 393 aa8.98□□□□□ -0.97
RNU4-59P-201ENST00000364447 ARHGEF3Q9NR81 526 aa8.98□□□□□ -0.97
RNU4-59P-201ENST00000364447 CDH7Q9ULB5 785 aa8.98□□□□□ -0.97
RNU4-59P-201ENST00000364447 PCDHB6Q9Y5E3 794 aa8.98□□□□□ -0.97
RNU4-59P-201ENST00000364447 PDCD11Q14690 1871 aaKnown RBP8.98□□□□□ -0.97
RNU4-59P-201ENST00000364447 SMIM28A0A1B0GU29 152 aa8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 PP2D1A8MPX8 630 aa8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 HARSP12081 509 aaKnown RBP8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 FGFR3P22607 806 aa8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 TKTP29401 623 aaKnown RBP8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 PRPHP41219 470 aa8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 TOB1P50616 345 aaPredicted RBP8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 STRN3Q13033 797 aa8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 RAB33AQ14088 237 aa8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 ZRSR1Q15695 479 aaKnown RBP8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 UPP1Q16831 310 aa8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 UVSSAQ2YD98 709 aa8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 PABPC1LQ4VXU2 614 aaKnown RBP8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 SPECC1Q5M775 1068 aa8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 MCTP1Q6DN14 999 aa8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 CEP120Q8N960 986 aa8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 ST13P5Q8NFI4 369 aaPredicted RBP8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 FGF13Q92913 245 aa8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 DDX27Q96GQ7 796 aaKnown RBP8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 SHDQ96IW2 340 aa8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 ACO2Q99798 780 aaKnown RBP8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 SLC2A4RGQ9NR83 387 aa8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 SLC38A7Q9NVC3 462 aa8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 MTRRQ9UBK8 725 aa8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 SIT1Q9Y3P8 196 aa8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 RBM19Q9Y4C8 960 aaKnown RBP8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 CDY1Q9Y6F8 540 aa8.97□□□□□ -0.97
RNU4-59P-201ENST00000364447 I3L4J1 428 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 PODXLO00592 558 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 PRRG1O14668 218 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 SLC16A4O15374 487 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 DCNP07585 359 aaKnown RBP8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 MCF2P10911 925 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 CDC25AP30304 524 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 ELF1P32519 619 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 BRCC3P46736 316 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 PHLDB3Q6NSJ2 640 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 PARM1Q6UWI2 310 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 MPZL3Q6UWV2 235 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 RTL10Q7L3V2 364 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 DAW1Q8N136 415 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 ITFG1Q8TB96 612 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 ING5Q8WYH8 240 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 FGF14Q92915 247 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 CDK5RAP3Q96JB5 506 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 SNX27Q96L92 541 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 ACAP3Q96P50 834 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 KXD1Q9BQD3 176 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 RUSC1Q9BVN2 902 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 TIPINQ9BVW5 301 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 TARS2Q9BW92 718 aaKnown RBP8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 TMEM134Q9H6X4 195 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 C17orf75Q9HAS0 396 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 HCFC1R1Q9NWW0 138 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 ARHGAP28Q9P2N2 729 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 ANKFY1Q9P2R3 1169 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 NUB1Q9Y5A7 615 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 BACE2Q9Y5Z0 518 aa8.96□□□□□ -0.98
RNU4-59P-201ENST00000364447 NOTCH4Q99466 2003 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 H7C4K7 107 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 LRG1P02750 347 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 POU2F2P09086 479 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 IGFBP6P24592 240 aaPredicted RBP8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 MATR3P43243 847 aaKnown RBP eCLIP8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 SMTNP53814 917 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 ARPP19P56211 112 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 GPC5P78333 572 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 PFKPQ01813 784 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 ROR1Q01973 937 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 SOX4Q06945 474 aaPredicted RBP8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 RAD51AP2Q09MP3 1159 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 MAPK7Q13164 816 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 NOLC1Q14978 699 aaKnown RBP eCLIP8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 RILPL1Q5EBL4 403 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 VARS2Q5ST30 1063 aaKnown RBP8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 RINT1Q6NUQ1 792 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 C1orf186Q6ZWK4 172 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 TAS1R3Q7RTX0 852 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 NPAS3Q8IXF0 933 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 ADSSL1Q8N142 457 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 C3orf58Q8NDZ4 430 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 PJA1Q8NG27 643 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 KCNG4Q8TDN1 519 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 KIF2CQ99661 725 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 PTPRHQ9HD43 1115 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 CNTN3Q9P232 1028 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 DNMT3BQ9UBC3 853 aaKnown RBP8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 KCNG1Q9UIX4 513 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 KCNH3Q9ULD8 1083 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 MRPS23Q9Y3D9 190 aaKnown RBP8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 FAM186AA6NE01 2351 aa8.95□□□□□ -0.98
RNU4-59P-201ENST00000364447 USP34Q70CQ2 3546 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms