RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 SLC6A3Q01959 620 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 APBA1Q02410 837 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 SLC1A5Q15758 541 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 C10orf25Q5T742 122 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 ZNF449Q6P9G9 518 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 CCDC81Q6ZN84 652 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 COLCA1Q6ZS62 124 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 TSHZ1Q6ZSZ6 1077 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 IFNL3Q8IZI9 196 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 CAMKK1Q8N5S9 505 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 C8orf58Q8NAV2 365 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 PUM2Q8TB72 1066 aaKnown RBP eCLIP0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 DCAF4Q8WV16 495 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 FOXRED1Q96CU9 486 aaPredicted RBP0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 MMS19Q96T76 1030 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 FOXB1Q99853 325 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 ALG1Q9BT22 464 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 SPON2Q9BUD6 331 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 RNPEPQ9H4A4 650 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 CDCP1Q9H5V8 836 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 KLHL13Q9P2N7 655 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 PRO0461Q9UI25 63 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 GGT7Q9UJ14 662 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 KCNE5Q9UJ90 142 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 ZMYM3Q14202 1370 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 AATKQ6ZMQ8 1374 aa0.56□□□□□ -2.32
RNU6-340P-201ENST00000364005 A0A0B4J293 547 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 ZNF561-AS1K7EIQ3 104 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 SCDO00767 359 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 FCHO1O14526 889 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 PROM1O43490 865 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 DLX3O60479 287 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 LDB3O75112 727 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 ERN1O75460 977 aaKnown RBP0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 JTBO76095 146 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 FSBPO95073 299 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 CHRM2P08172 466 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 SRGNP10124 158 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 PYGMP11217 842 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 ATP5F1P24539 256 aaPredicted RBP0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 GJA8P48165 433 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 CCT8P50990 548 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 DUSP2Q05923 314 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 PTPRRQ15256 657 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 MAN2A1Q16706 1144 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 TXNRD1Q16881 649 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 GEN1Q17RS7 908 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 EAPPQ56P03 285 aaPredicted RBP0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 ZNF772Q68DY9 489 aaPredicted RBP0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 MED25Q71SY5 747 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 PIP4P1Q86T03 277 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 RTN4RL1Q86UN2 441 aaPredicted RBP0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 PIK3C3Q8NEB9 887 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 ZNF548Q8NEK5 533 aaPredicted RBP0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 ZFP28Q8NHY6 868 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 REPS1Q96D71 796 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 ZFYVE21Q9BQ24 234 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 HERPUD2Q9BSE4 406 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 DCTN5Q9BTE1 182 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 OSBPL6Q9BZF3 934 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 MRPL44Q9H9J2 332 aaKnown RBP0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 KCNH7Q9NS40 1196 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 VTI1BQ9UEU0 232 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 SYNPO2Q9UMS6 1093 aa0.55□□□□□ -2.32
RNU6-340P-201ENST00000364005 MUC5BQ9HC84 5762 aaPredicted RBP0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 SCN5AQ14524 2016 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 PRR23AA6NEV1 266 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 SRRM3A6NNA2 597 aaPredicted RBP0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 SORBS3O60504 671 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 TTLL1O95922 423 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 PRLP01236 227 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 KRT5P13647 590 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 CD19P15391 556 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 IL1R2P27930 398 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 HOXD9P28356 352 aaPredicted RBP0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 SDHAP31040 664 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 ME1P48163 572 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 GIPRP48546 466 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 CSRP3P50461 194 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 EIF6P56537 245 aaKnown RBP0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 ROM1Q03395 351 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 KEAP1Q14145 624 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 RBM39Q14498 530 aaKnown RBP0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 TMEM132BQ14DG7 1078 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 NCAPHQ15003 741 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 CATSPEREQ5SY80 951 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 SLFN12LQ6IEE8 588 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 ADAM5Q6NVV9 412 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 CEP85Q6P2H3 762 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 FOXR2Q6PJQ5 311 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 PNLDC1Q8NA58 520 aaKnown RBP0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 TOR1AIP2Q8NFQ8 470 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 SLC30A5Q8TAD4 765 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 FBXW5Q969U6 566 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 BCANQ96GW7 911 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 FUBP3Q96I24 572 aaKnown RBP eCLIP0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 PGBD1Q96JS3 809 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 SOX7Q9BT81 388 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 IER2Q9BTL4 223 aa0.54□□□□□ -2.32
RNU6-340P-201ENST00000364005 SENP6Q9GZR1 1112 aaPredicted RBP0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms