RNA–Protein interactions for RNA: ENST00000363858.1

RNU6-271P-201, Transcript of RNA, U6 small nuclear 271, pseudogene, humanhuman

BASIC

Gene RNU6-271P, Length 105 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-271P-201ENST00000363858 CPA6Q8N4T0 437 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 ZNF276Q8N554 614 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 ZCRB1Q8TBF4 217 aaKnown RBP2.55□□□□□ -2
RNU6-271P-201ENST00000363858 SLC25A43Q8WUT9 341 aaPredicted RBP2.55□□□□□ -2
RNU6-271P-201ENST00000363858 NACC2Q96BF6 587 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 CLIP3Q96DZ5 547 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 HOOK2Q96ED9 719 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 TMX3Q96JJ7 454 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 UHRF1Q96T88 793 aaPredicted RBP2.55□□□□□ -2
RNU6-271P-201ENST00000363858 ZSWIM1Q9BR11 485 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 SLC46A2Q9BY10 475 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 RHOBTB2Q9BYZ6 727 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 CSRNP2Q9H175 543 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 EPC1Q9H2F5 836 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 ALG13Q9NP73 1137 aaKnown RBP2.55□□□□□ -2
RNU6-271P-201ENST00000363858 PARPBPQ9NWS1 579 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 TRPM5Q9NZQ8 1165 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 FAM30AQ9NZY2 134 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 SLC45A2Q9UMX9 530 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 MAP3K2Q9Y2U5 619 aa2.55□□□□□ -2
RNU6-271P-201ENST00000363858 USP15Q9Y4E8 981 aaPredicted RBP2.55□□□□□ -2
RNU6-271P-201ENST00000363858 AATKQ6ZMQ8 1374 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 hCG_2014768A0A024R1R8 64 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 PRSS29PA6NIE9 313 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 FZD7O75084 574 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 ALDH1L1O75891 902 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 ITGB1P05556 798 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 SNRPA1P09661 255 aaKnown RBP2.54□□□□□ -2
RNU6-271P-201ENST00000363858 FCER1AP12319 257 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 HSP90B1P14625 803 aaKnown RBP2.54□□□□□ -2
RNU6-271P-201ENST00000363858 IL2RBP14784 551 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 PROZP22891 400 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 GCSHP23434 173 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 RECQLP46063 649 aaPredicted RBP2.54□□□□□ -2
RNU6-271P-201ENST00000363858 PER3P56645 1201 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 CDC42EP1Q00587 391 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 UBXN2BQ14CS0 331 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 TTF1Q15361 905 aaPredicted RBP2.54□□□□□ -2
RNU6-271P-201ENST00000363858 DACT2Q5SW24 774 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 EFCAB2Q5VUJ9 269 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 EFCAB12Q6NXP0 572 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 MED25Q71SY5 747 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 CATIPQ7Z7H3 387 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 PNMA8AQ86V59 439 aaPredicted RBP2.54□□□□□ -2
RNU6-271P-201ENST00000363858 VRK3Q8IV63 474 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 RHOT2Q8IXI1 618 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 Q8NA96 180 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 OR56A1Q8NGH5 318 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 ASB10Q8WXI3 467 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 CHMP4CQ96CF2 233 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 C7orf25Q9BPX7 421 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 TLR10Q9BXR5 811 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 GTPBP4Q9BZE4 634 aaKnown RBP2.54□□□□□ -2
RNU6-271P-201ENST00000363858 SLC12A5Q9H2X9 1139 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 NRDE2Q9H7Z3 1164 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 TCF7L1Q9HCS4 588 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 AKIP1Q9NQ31 210 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 TYW1Q9NV66 732 aaKnown RBP2.54□□□□□ -2
RNU6-271P-201ENST00000363858 MRPS18AQ9NVS2 196 aaKnown RBP2.54□□□□□ -2
RNU6-271P-201ENST00000363858 ANKFY1Q9P2R3 1169 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.54□□□□□ -2
RNU6-271P-201ENST00000363858 USP25Q9UHP3 1055 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 EIF2B4Q9UI10 523 aaKnown RBP2.54□□□□□ -2
RNU6-271P-201ENST00000363858 FZD1Q9UP38 647 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 HDAC5Q9UQL6 1122 aa2.54□□□□□ -2
RNU6-271P-201ENST00000363858 CDHR4A6H8M9 788 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 E9PLN8 166 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 F2RL2O00254 374 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 GRM6O15303 877 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 PRPF3O43395 683 aaKnown RBP2.53□□□□□ -2
RNU6-271P-201ENST00000363858 AKAP10O43572 662 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 SGTAO43765 313 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 SPDEFO95238 335 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 CFIP05156 583 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 FGFR4P22455 802 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 ABHD18Q0P651 414 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 SNAPC2Q13487 334 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 TP53BP2Q13625 1128 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 LRRC41Q15345 812 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 UAP1L1Q3KQV9 507 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 PLEKHG6Q3KR16 790 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 RRP12Q5JTH9 1297 aaKnown RBP2.53□□□□□ -2
RNU6-271P-201ENST00000363858 COL23A1Q86Y22 540 aaPredicted RBP2.53□□□□□ -2
RNU6-271P-201ENST00000363858 DRC7Q8IY82 874 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 AMER2Q8N7J2 671 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 CPEB3Q8NE35 698 aaKnown RBP2.53□□□□□ -2
RNU6-271P-201ENST00000363858 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.53□□□□□ -2
RNU6-271P-201ENST00000363858 ZFP28Q8NHY6 868 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 NEU4Q8WWR8 484 aaPredicted RBP2.53□□□□□ -2
RNU6-271P-201ENST00000363858 HDAC10Q969S8 669 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 MYEOVQ96EZ4 313 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 CYFIP2Q96F07 1278 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 LRIG1Q96JA1 1093 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 CLPTM1LQ96KA5 538 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 PHACTR3Q96KR7 559 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 SORCS2Q96PQ0 1159 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 VRK1Q99986 396 aaPredicted RBP2.53□□□□□ -2
RNU6-271P-201ENST00000363858 VKORC1Q9BQB6 163 aa2.53□□□□□ -2
RNU6-271P-201ENST00000363858 C11orf54Q9H0W9 315 aaPredicted RBP2.53□□□□□ -2
RNU6-271P-201ENST00000363858 MANSC1Q9H8J5 431 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms