RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 TPM4P67936 248 aa13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 DLG4P78352 724 aa13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 PPP2R3AQ06190 1150 aa13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 SPAG1Q07617 926 aa13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 USP37Q86T82 979 aa13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 NT5DC4Q86YG4 428 aa13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 PHOSPHO2Q8TCD6 241 aa13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 RSPH1Q8WYR4 309 aa13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 ZFP42Q96MM3 310 aa13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 ZMAT2Q96NC0 199 aaKnown RBP13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 FNBP1Q96RU3 617 aa13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 POP1Q99575 1024 aaKnown RBP13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 MTIF3Q9H2K0 278 aaKnown RBP13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 LIMA1Q9UHB6 759 aaKnown RBP13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 DERAQ9Y315 318 aa13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 TRIP11Q15643 1979 aa13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 ANK1P16157 1881 aa13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 LRRIQ3A6PVS8 624 aaPredicted RBP13.44□□□□□ -0.26
NIF3L1-201ENST00000359683 PTGESO14684 152 aa13.44□□□□□ -0.26
NIF3L1-201ENST00000359683 FGFR1P11362 822 aa13.44□□□□□ -0.26
NIF3L1-201ENST00000359683 ATP1A3P13637 1013 aa13.44□□□□□ -0.26
NIF3L1-201ENST00000359683 CDK11BP21127 795 aaKnown RBP13.44□□□□□ -0.26
NIF3L1-201ENST00000359683 MLH1P40692 756 aa13.44□□□□□ -0.26
NIF3L1-201ENST00000359683 SHHQ15465 462 aa13.44□□□□□ -0.26
NIF3L1-201ENST00000359683 C9orf50Q5SZB4 431 aa13.44□□□□□ -0.26
NIF3L1-201ENST00000359683 JADE1Q6IE81 842 aa13.44□□□□□ -0.26
NIF3L1-201ENST00000359683 GLB1LQ6UWU2 654 aa13.44□□□□□ -0.26
NIF3L1-201ENST00000359683 APTXQ7Z2E3 356 aaKnown RBP13.44□□□□□ -0.26
NIF3L1-201ENST00000359683 CREBRFQ8IUR6 639 aa13.44□□□□□ -0.26
NIF3L1-201ENST00000359683 EFCAB13Q8IY85 973 aa13.44□□□□□ -0.26
NIF3L1-201ENST00000359683 HELQQ8TDG4 1101 aa13.44□□□□□ -0.26
NIF3L1-201ENST00000359683 ZNF516Q92618 1163 aa13.44□□□□□ -0.26
NIF3L1-201ENST00000359683 SLC35C1Q96A29 364 aa13.44□□□□□ -0.26
NIF3L1-201ENST00000359683 CASD1Q96PB1 797 aa13.44□□□□□ -0.26
NIF3L1-201ENST00000359683 CGRRF1Q99675 332 aa13.44□□□□□ -0.26
NIF3L1-201ENST00000359683 TMEM117Q9H0C3 514 aa13.44□□□□□ -0.26
NIF3L1-201ENST00000359683 C2CD2Q9Y426 696 aa13.44□□□□□ -0.26
NIF3L1-201ENST00000359683 SLC4A7Q9Y6M7 1214 aa13.44□□□□□ -0.26
NIF3L1-201ENST00000359683 UPP2O95045 317 aa13.43□□□□□ -0.26
NIF3L1-201ENST00000359683 DLATP10515 647 aaKnown RBP13.43□□□□□ -0.26
NIF3L1-201ENST00000359683 GTF2H1P32780 548 aa13.43□□□□□ -0.26
NIF3L1-201ENST00000359683 MTIF2P46199 727 aaKnown RBP13.43□□□□□ -0.26
NIF3L1-201ENST00000359683 AP3M2P53677 418 aa13.43□□□□□ -0.26
NIF3L1-201ENST00000359683 KRT31Q15323 416 aa13.43□□□□□ -0.26
NIF3L1-201ENST00000359683 MAN2A1Q16706 1144 aa13.43□□□□□ -0.26
NIF3L1-201ENST00000359683 NOMO2Q5JPE7 1267 aa13.43□□□□□ -0.26
NIF3L1-201ENST00000359683 ZNF697Q5TEC3 545 aa13.43□□□□□ -0.26
NIF3L1-201ENST00000359683 WDR49Q8IV35 697 aa13.43□□□□□ -0.26
NIF3L1-201ENST00000359683 ZNF689Q96CS4 500 aaPredicted RBP13.43□□□□□ -0.26
NIF3L1-201ENST00000359683 FAM161BQ96MY7 647 aa13.43□□□□□ -0.26
NIF3L1-201ENST00000359683 GUCD1Q96NT3 240 aa13.43□□□□□ -0.26
NIF3L1-201ENST00000359683 PPP1R10Q96QC0 940 aaKnown RBP13.43□□□□□ -0.26
NIF3L1-201ENST00000359683 SLC9A7Q96T83 725 aa13.43□□□□□ -0.26
NIF3L1-201ENST00000359683 TUBGCP2Q9BSJ2 902 aa13.43□□□□□ -0.26
NIF3L1-201ENST00000359683 INTS13Q9NVM9 706 aa13.43□□□□□ -0.26
NIF3L1-201ENST00000359683 KANSL3Q9P2N6 904 aa13.43□□□□□ -0.26
NIF3L1-201ENST00000359683 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.43□□□□□ -0.26
NIF3L1-201ENST00000359683 DLL1O00548 723 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 STX10O60499 249 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 THP07101 528 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 NFICP08651 508 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 TRIM49P0CI25 452 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 TRIM49CP0CI26 452 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 TNNI1P19237 187 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 GATMP50440 423 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 SCNN1GP51170 649 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 PPP3CAQ08209 521 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 TMEM132DQ14C87 1099 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 NAB2Q15742 525 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 DUOXA2Q1HG44 320 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 TMCO2Q7Z6W1 182 aaPredicted RBP13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 ABI1Q8IZP0 508 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 ANKRD20A12PQ8NF67 263 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 OR5B17Q8NGF7 314 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 CACTINQ8WUQ7 758 aaKnown RBP13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 KIF12Q96FN5 646 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 RPS6KC1Q96S38 1066 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 RC3H2Q9HBD1 1191 aaKnown RBP13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 PLAGL2Q9UPG8 496 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 PTPRJQ12913 1337 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 RALGAPA2Q2PPJ7 1873 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 PTPRSQ13332 1948 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 PMM2O15305 246 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 GJB5O95377 273 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 C4BPAP04003 597 aaKnown RBP13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 CYP3A5P20815 502 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 HTRA4P83105 476 aaPredicted RBP13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 TFAMQ00059 246 aaKnown RBP13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 KCNH2Q12809 1159 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 GRIK3Q13003 919 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 UVSSAQ2YD98 709 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 VWA3BQ502W6 1294 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 DCAF17Q5H9S7 520 aaPredicted RBP13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 MIIPQ5JXC2 388 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 GLRA4Q5JXX5 417 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 TCERG1LQ5VWI1 586 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 LMBRD2Q68DH5 695 aaPredicted RBP13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 FAM109BQ6ICB4 259 aaPredicted RBP13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 C15orf39Q6ZRI6 1047 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms