RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 XPO7Q9UIA9 1087 aaKnown RBP19.34■□□□□ 0.69
SHANK1-202ENST00000359082 LZTS1Q9Y250 596 aa19.34■□□□□ 0.69
SHANK1-202ENST00000359082 RPS6KA4O75676 772 aa19.34■□□□□ 0.69
SHANK1-202ENST00000359082 FRMD5Q7Z6J6 570 aa19.34■□□□□ 0.69
SHANK1-202ENST00000359082 KRT8P05787 483 aa19.34■□□□□ 0.69
SHANK1-202ENST00000359082 CCDC159P0C7I6 412 aa19.34■□□□□ 0.69
SHANK1-202ENST00000359082 AP3M2P53677 418 aa19.34■□□□□ 0.69
SHANK1-202ENST00000359082 HAUS6Q7Z4H7 955 aa19.34■□□□□ 0.69
SHANK1-202ENST00000359082 SNX31Q8N9S9 440 aa19.34■□□□□ 0.69
SHANK1-202ENST00000359082 APPL2Q8NEU8 664 aa19.34■□□□□ 0.69
SHANK1-202ENST00000359082 CELF1Q92879 486 aaKnown RBP19.34■□□□□ 0.69
SHANK1-202ENST00000359082 SRPK1Q96SB4 655 aaKnown RBP19.34■□□□□ 0.69
SHANK1-202ENST00000359082 PTCH1Q13635 1447 aa19.34■□□□□ 0.69
SHANK1-202ENST00000359082 PCSK7Q16549 785 aa19.34■□□□□ 0.69
SHANK1-202ENST00000359082 LRRC36Q1X8D7 754 aa19.34■□□□□ 0.69
SHANK1-202ENST00000359082 SPATA21Q7Z572 469 aa19.34■□□□□ 0.69
SHANK1-202ENST00000359082 COG1Q8WTW3 980 aa19.34■□□□□ 0.69
SHANK1-202ENST00000359082 CYGBQ8WWM9 190 aa19.34■□□□□ 0.69
SHANK1-202ENST00000359082 MAP3K10Q02779 954 aa19.34■□□□□ 0.69
SHANK1-202ENST00000359082 DTX3LQ8TDB6 740 aa19.34■□□□□ 0.69
SHANK1-202ENST00000359082 TRIM62Q9BVG3 475 aa19.34■□□□□ 0.69
SHANK1-202ENST00000359082 AKAP10O43572 662 aa19.33■□□□□ 0.69
SHANK1-202ENST00000359082 CYBBP04839 570 aa19.33■□□□□ 0.69
SHANK1-202ENST00000359082 RCOR2Q8IZ40 523 aa19.33■□□□□ 0.69
SHANK1-202ENST00000359082 TTC39CQ8N584 583 aa19.33■□□□□ 0.69
SHANK1-202ENST00000359082 SLC35G2Q8TBE7 412 aa19.33■□□□□ 0.69
SHANK1-202ENST00000359082 HSPBP1Q9NZL4 362 aa19.33■□□□□ 0.69
SHANK1-202ENST00000359082 ADCY3O60266 1144 aa19.33■□□□□ 0.69
SHANK1-202ENST00000359082 AKT1P31749 480 aa19.33■□□□□ 0.69
SHANK1-202ENST00000359082 TRIM51Q9BSJ1 452 aa19.33■□□□□ 0.69
SHANK1-202ENST00000359082 ZNF711Q9Y462 761 aa19.33■□□□□ 0.69
SHANK1-202ENST00000359082 ADGRA2Q96PE1 1338 aa19.33■□□□□ 0.69
SHANK1-202ENST00000359082 SUPT3HB4E1H0 165 aa19.33■□□□□ 0.69
SHANK1-202ENST00000359082 LRRC1Q9BTT6 524 aa19.33■□□□□ 0.69
SHANK1-202ENST00000359082 SYTL2Q9HCH5 934 aa19.33■□□□□ 0.69
SHANK1-202ENST00000359082 CFAP73A6NFT4 308 aa19.33■□□□□ 0.68
SHANK1-202ENST00000359082 DDX5P17844 614 aaKnown RBP19.33■□□□□ 0.68
SHANK1-202ENST00000359082 KYAT1Q16773 422 aa19.33■□□□□ 0.68
SHANK1-202ENST00000359082 CLEC4GQ6UXB4 293 aa19.33■□□□□ 0.68
SHANK1-202ENST00000359082 ARHGEF38Q9NXL2 777 aa19.33■□□□□ 0.68
SHANK1-202ENST00000359082 LIMA1Q9UHB6 759 aaKnown RBP19.33■□□□□ 0.68
SHANK1-202ENST00000359082 PFASO15067 1338 aa19.33■□□□□ 0.68
SHANK1-202ENST00000359082 WDR47O94967 919 aa19.33■□□□□ 0.68
SHANK1-202ENST00000359082 RANBP1P43487 201 aa19.33■□□□□ 0.68
SHANK1-202ENST00000359082 ACTR2P61160 394 aa19.33■□□□□ 0.68
SHANK1-202ENST00000359082 WASHC5Q12768 1159 aa19.33■□□□□ 0.68
SHANK1-202ENST00000359082 ATPAF2Q8N5M1 289 aa19.33■□□□□ 0.68
SHANK1-202ENST00000359082 TNIP3Q96KP6 325 aa19.33■□□□□ 0.68
SHANK1-202ENST00000359082 EHD2Q9NZN4 543 aa19.33■□□□□ 0.68
SHANK1-202ENST00000359082 COPB2P35606 906 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 ORC2Q13416 577 aaPredicted RBP19.32■□□□□ 0.68
SHANK1-202ENST00000359082 SHC4Q6S5L8 630 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 AGAP1Q9UPQ3 857 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 TRPC1P48995 793 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 MTHFD1LQ6UB35 978 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 MCEEQ96PE7 176 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 MUC3BQ9H195 1237 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 JPH1Q9HDC5 661 aaPredicted RBP19.32■□□□□ 0.68
SHANK1-202ENST00000359082 DBR1Q9UK59 544 aaKnown RBP19.32■□□□□ 0.68
SHANK1-202ENST00000359082 HOXD10P28358 340 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 SLC1A1P43005 524 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 STAT4Q14765 748 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 MTF1Q14872 753 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 CNGA3Q16281 694 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 SLC25A41Q8N5S1 370 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 FAM162AQ96A26 154 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 GRAMD1AQ96CP6 724 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 PKD2L2Q9NZM6 624 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 RNF181Q9P0P0 153 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 HIST1H2AGP0C0S8 130 aaPredicted RBP19.32■□□□□ 0.68
SHANK1-202ENST00000359082 CHN1P15882 459 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 HIST1H2ADP20671 130 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 KIAA2013Q8IYS2 634 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 TBC1D19Q8N5T2 526 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 SCFD1Q8WVM8 642 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 TMEM143Q96AN5 459 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 HIST1H2AHQ96KK5 128 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 HIST1H2AJQ99878 128 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 H2AFJQ9BTM1 129 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 PCMTD2Q9NV79 361 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 RGL1Q9NZL6 768 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 ATP11BQ9Y2G3 1177 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 CHD1O14646 1710 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 ENO3P13929 434 aaPredicted RBP19.32■□□□□ 0.68
SHANK1-202ENST00000359082 C11orf74Q86VG3 221 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 C17orf80Q9BSJ5 609 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 WDR19Q8NEZ3 1342 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 POLRMTO00411 1230 aaKnown RBP19.32■□□□□ 0.68
SHANK1-202ENST00000359082 DAB1O75553 588 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 ABCE1P61221 599 aaKnown RBP19.32■□□□□ 0.68
SHANK1-202ENST00000359082 SKOR1P84550 965 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 PLD3Q8IV08 490 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 ATL2Q8NHH9 583 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 PHF21AQ96BD5 680 aa19.32■□□□□ 0.68
SHANK1-202ENST00000359082 ZCCHC17Q9NP64 241 aaKnown RBP19.32■□□□□ 0.68
SHANK1-202ENST00000359082 MARCOQ9UEW3 520 aaPredicted RBP19.32■□□□□ 0.68
SHANK1-202ENST00000359082 C3orf70A6NLC5 250 aaPredicted RBP19.31■□□□□ 0.68
SHANK1-202ENST00000359082 MAFGO15525 162 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 ACOT2P49753 483 aa19.31■□□□□ 0.68
SHANK1-202ENST00000359082 NT5C2P49902 561 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms