RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 RNF225M0QZC1 329 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 PHACTR2O75167 634 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 TRIM49P0CI25 452 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 TRIM49CP0CI26 452 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 GCLMP48507 274 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 GPC3P51654 580 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 MTF1Q14872 753 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 GPNMBQ14956 572 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 ATF7IP2Q5U623 682 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 MTHFD1LQ6UB35 978 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 MPZL3Q6UWV2 235 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 CBWD2Q8IUF1 395 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 NME8Q8N427 588 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 LMBR1Q8WVP7 490 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 SAAL1Q96ER3 474 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 NLRP4Q96MN2 994 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 ACO2Q99798 780 aaKnown RBP11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 CCDC113Q9H0I3 377 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 FZD8Q9H461 694 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 RNPEPQ9H4A4 650 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 C1orf112Q9NSG2 853 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 RAB20Q9NX57 234 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 ARHGAP20Q9P2F6 1191 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 ANKFY1Q9P2R3 1169 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 INTUQ9ULD6 942 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 TNFSF13BQ9Y275 285 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 PCDHA13Q9Y5I0 950 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 CHD7Q9P2D1 2997 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 MROH7Q68CQ1 1323 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 ADGRA3Q8IWK6 1321 aa11.6□□□□□ -0.55
TRAPPC4-201ENST00000359005 SMIM35A0A1B0GVV1 85 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 GOLGA8IPA6NC78 632 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 GOLGA8JA6NMD2 632 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 ZBTB42B2RXF5 422 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 F8VZ95 297 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 TULP1O00294 542 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 DYNC1I1O14576 645 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 TLR3O15455 904 aaKnown RBP11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 ERLIN2O94905 339 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 F2P00734 622 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 DLATP10515 647 aaKnown RBP11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 MCF2P10911 925 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 TBXAS1P24557 533 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 JAM2P57087 298 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 CHMP4BP1P59074 171 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 YWHAEP62258 255 aaKnown RBP11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 IGBP1P78318 339 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 CLDN10P78369 228 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 SMAD3P84022 425 aaKnown RBP11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 ZNF200P98182 395 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 GCNT1Q02742 428 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 MCL1Q07820 350 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 CBWD6Q4V339 395 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 EPC2Q52LR7 807 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 CBWD3Q5JTY5 395 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 CBWD5Q5RIA9 395 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 IQCEQ6IPM2 695 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 RSPH3Q86UC2 560 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 WDR49Q8IV35 697 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 CD302Q8IX05 232 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 LRRC71Q8N4P6 559 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 ACRBPQ8NEB7 543 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 NLRP7Q8WX94 980 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 SECISBP2LQ93073 1101 aaKnown RBP11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 CDX2Q99626 313 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 CGRRF1Q99675 332 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 TARS2Q9BW92 718 aaKnown RBP11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 GCOM2Q9BZD3 368 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 DNAI2Q9GZS0 605 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 TMEM117Q9H0C3 514 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 UBE2TQ9NPD8 197 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 GUCA1BQ9UMX6 200 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 FHOD1Q9Y613 1164 aa11.59□□□□□ -0.55
TRAPPC4-201ENST00000359005 LTBP2Q14767 1821 aa11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 ANO9A1A5B4 782 aa11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 LRRIQ3A6PVS8 624 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 EPHB6O15197 1021 aa11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 PJA2O43164 708 aa11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 URI1O94763 535 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 SLU7O95391 586 aaKnown RBP11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 TNNC2P02585 160 aa11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 ZNF286BP0CG31 522 aa11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 AXLP30530 894 aa11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 PSEN2P49810 448 aa11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 ARID5AQ03989 594 aa11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 PPIGQ13427 754 aaKnown RBP eCLIP11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 BIRC3Q13489 604 aa11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 MFSD10Q14728 455 aa11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 DRAP1Q14919 205 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 GRIN2CQ14957 1233 aa11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 NAB2Q15742 525 aa11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 DUOXA2Q1HG44 320 aa11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 TCTN1Q2MV58 587 aa11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 DCAF4L1Q3SXM0 396 aa11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 ZNF568Q3ZCX4 644 aa11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 FAM47CQ5HY64 1035 aa11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 ZNF569Q5MCW4 686 aa11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 GDF6Q6KF10 455 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 NFRKBQ6P4R8 1299 aa11.58□□□□□ -0.56
TRAPPC4-201ENST00000359005 SLC39A4Q6P5W5 647 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms