RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 TGFB1I1O43294 461 aa13.02□□□□□ -0.32
COL20A1-201ENST00000358894 ZNF568Q3ZCX4 644 aa13.02□□□□□ -0.32
COL20A1-201ENST00000358894 ZCWPW2Q504Y3 356 aa13.02□□□□□ -0.32
COL20A1-201ENST00000358894 CCDC62Q6P9F0 684 aa13.02□□□□□ -0.32
COL20A1-201ENST00000358894 RHPN2Q8IUC4 686 aa13.02□□□□□ -0.32
COL20A1-201ENST00000358894 TSNARE1Q96NA8 513 aa13.02□□□□□ -0.32
COL20A1-201ENST00000358894 NGRNQ9NPE2 291 aaKnown RBP13.02□□□□□ -0.32
COL20A1-201ENST00000358894 HAUS2Q9NVX0 235 aa13.02□□□□□ -0.32
COL20A1-201ENST00000358894 GTF3C4Q9UKN8 822 aa13.02□□□□□ -0.32
COL20A1-201ENST00000358894 FRMPD4Q14CM0 1322 aa13.02□□□□□ -0.32
COL20A1-201ENST00000358894 RASSF10A6NK89 507 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 KIF3CO14782 793 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 MCF2LO15068 1137 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 SPAG7O75391 227 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 DPEP1P16444 411 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 CIITAP33076 1130 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 COILP38432 576 aaPredicted RBP13.02□□□□□ -0.33
COL20A1-201ENST00000358894 PPP3CAQ08209 521 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 TFDP1Q14186 410 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 ZNF667Q5HYK9 610 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 DARS2Q6PI48 645 aaKnown RBP13.02□□□□□ -0.33
COL20A1-201ENST00000358894 CENPUQ71F23 418 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 SUGP1Q8IWZ8 645 aaKnown RBP13.02□□□□□ -0.33
COL20A1-201ENST00000358894 SYTL5Q8TDW5 730 aaPredicted RBP13.02□□□□□ -0.33
COL20A1-201ENST00000358894 EPS8L3Q8TE67 593 aaKnown RBP13.02□□□□□ -0.33
COL20A1-201ENST00000358894 ATP8B4Q8TF62 1192 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 KRT35Q92764 455 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 SLC5A5Q92911 643 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 RBM41Q96IZ5 413 aaKnown RBP13.02□□□□□ -0.33
COL20A1-201ENST00000358894 SEC16BQ96JE7 1060 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 PABPC3Q9H361 631 aaKnown RBP13.02□□□□□ -0.33
COL20A1-201ENST00000358894 MYOZ2Q9NPC6 264 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 HOXC10Q9NYD6 342 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 A0A0A6YYK5 440 aaPredicted RBP13.02□□□□□ -0.33
COL20A1-201ENST00000358894 I3L4J1 428 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 P4HA2O15460 535 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 PFDN1O60925 122 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 PSMD10O75832 226 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 LUC7L3O95232 432 aaKnown RBP13.02□□□□□ -0.33
COL20A1-201ENST00000358894 HSPA9P38646 679 aaKnown RBP13.02□□□□□ -0.33
COL20A1-201ENST00000358894 MSH2P43246 934 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 SLC8A3P57103 927 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 XKR3Q5GH77 459 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 LGSNQ5TDP6 509 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 ZNF354CQ86Y25 554 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 PARP9Q8IXQ6 854 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 ATL2Q8NHH9 583 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 LNX1Q8TBB1 728 aaPredicted RBP13.02□□□□□ -0.33
COL20A1-201ENST00000358894 CCDC110Q8TBZ0 833 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 ZKSCAN4Q969J2 545 aaPredicted RBP13.02□□□□□ -0.33
COL20A1-201ENST00000358894 HEXIM2Q96MH2 286 aaKnown RBP13.02□□□□□ -0.33
COL20A1-201ENST00000358894 RILPQ96NA2 401 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 TEX13BQ9BXU2 312 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 DNAJC18Q9H819 358 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 TTLL3Q9Y4R7 772 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 PCDHB2Q9Y5E7 798 aa13.02□□□□□ -0.33
COL20A1-201ENST00000358894 MYH6P13533 1939 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 CRYBG1Q9Y4K1 1723 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 TCP11X1B4DZS4 312 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 PRKCIP41743 596 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 PPP2R5CQ13362 524 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 AGBL2Q5U5Z8 902 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 SV2AQ7L0J3 742 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 CDR2LQ86X02 465 aaPredicted RBP13.01□□□□□ -0.33
COL20A1-201ENST00000358894 ZBED8Q8IZ13 594 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 RNF149Q8NC42 400 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 RBBP8NLQ8NC74 664 aaPredicted RBP13.01□□□□□ -0.33
COL20A1-201ENST00000358894 PSPC1Q8WXF1 523 aaKnown RBP13.01□□□□□ -0.33
COL20A1-201ENST00000358894 HSD17B14Q9BPX1 270 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 DEFB129Q9H1M3 183 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 SEMA4AQ9H3S1 761 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 RPF1Q9H9Y2 349 aaKnown RBP13.01□□□□□ -0.33
COL20A1-201ENST00000358894 CALCAP01258 141 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 VIL1P09327 827 aaKnown RBP13.01□□□□□ -0.33
COL20A1-201ENST00000358894 HYIQ5T013 277 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 PHLDB3Q6NSJ2 640 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 EPM2AIP1Q7L775 607 aaPredicted RBP13.01□□□□□ -0.33
COL20A1-201ENST00000358894 PDIK1LQ8N165 341 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 TATDN2Q93075 761 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 FAM149B1Q96BN6 582 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 ACSF2Q96CM8 615 aaPredicted RBP13.01□□□□□ -0.33
COL20A1-201ENST00000358894 CNOT7Q9UIV1 285 aaKnown RBP13.01□□□□□ -0.33
COL20A1-201ENST00000358894 SNED1Q8TER0 1413 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 RALAP11233 206 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 PAX7P23759 505 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 RRM1P23921 792 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 ARSEP51690 589 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 CDR2Q01850 454 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 NCOA4Q13772 614 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 EMC2Q15006 297 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 SYCP2LQ5T4T6 812 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 DCPSQ96C86 337 aaKnown RBP13.01□□□□□ -0.33
COL20A1-201ENST00000358894 PURBQ96QR8 312 aaKnown RBP13.01□□□□□ -0.33
COL20A1-201ENST00000358894 TIPINQ9BVW5 301 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 OSBPL8Q9BZF1 889 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 LAMA4Q16363 1823 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 MYH8P13535 1937 aa13.01□□□□□ -0.33
COL20A1-201ENST00000358894 TBXAS1P24557 533 aaPredicted RBP13□□□□□ -0.33
COL20A1-201ENST00000358894 ABCD1P33897 745 aa13□□□□□ -0.33
COL20A1-201ENST00000358894 ZNF844Q08AG5 666 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms