RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 MOGSQ13724 837 aa25.25■■□□□ 1.63
NPAS3-203ENST00000357798 TRIP13Q15645 432 aaPredicted RBP25.25■■□□□ 1.63
NPAS3-203ENST00000357798 CERKLQ49MI3 558 aaPredicted RBP25.25■■□□□ 1.63
NPAS3-203ENST00000357798 SIAH1Q8IUQ4 282 aa25.25■■□□□ 1.63
NPAS3-203ENST00000357798 ENDOVQ8N8Q3 282 aaKnown RBP25.25■■□□□ 1.63
NPAS3-203ENST00000357798 BTAF1O14981 1849 aa25.24■■□□□ 1.63
NPAS3-203ENST00000357798 GAS7O60861 476 aa25.24■■□□□ 1.63
NPAS3-203ENST00000357798 LINGO3P0C6S8 592 aa25.24■■□□□ 1.63
NPAS3-203ENST00000357798 CYP11B1P15538 503 aa25.24■■□□□ 1.63
NPAS3-203ENST00000357798 SLC18A1P54219 525 aa25.24■■□□□ 1.63
NPAS3-203ENST00000357798 ACAD10Q6JQN1 1059 aa25.24■■□□□ 1.63
NPAS3-203ENST00000357798 LRRC37BQ96QE4 947 aa25.24■■□□□ 1.63
NPAS3-203ENST00000357798 FAM167BQ9BTA0 163 aa25.24■■□□□ 1.63
NPAS3-203ENST00000357798 FOXP3Q9BZS1 431 aa25.24■■□□□ 1.63
NPAS3-203ENST00000357798 TMEM117Q9H0C3 514 aa25.24■■□□□ 1.63
NPAS3-203ENST00000357798 RPL26L1Q9UNX3 145 aaKnown RBP25.24■■□□□ 1.63
NPAS3-203ENST00000357798 LRRC37AA6NMS7 1700 aa25.24■■□□□ 1.63
NPAS3-203ENST00000357798 IKQ13123 557 aaPredicted RBP25.24■■□□□ 1.63
NPAS3-203ENST00000357798 LLGL1Q15334 1064 aa25.24■■□□□ 1.63
NPAS3-203ENST00000357798 SPDYAQ5MJ70 313 aa25.24■■□□□ 1.63
NPAS3-203ENST00000357798 XXYLT1Q8NBI6 393 aa25.24■■□□□ 1.63
NPAS3-203ENST00000357798 ACCSQ96QU6 501 aa25.24■■□□□ 1.63
NPAS3-203ENST00000357798 COA1Q9GZY4 146 aa25.24■■□□□ 1.63
NPAS3-203ENST00000357798 TPBGLP0DKB5 382 aa25.23■■□□□ 1.63
NPAS3-203ENST00000357798 TAL1P17542 331 aaPredicted RBP25.23■■□□□ 1.63
NPAS3-203ENST00000357798 ALDH3A1P30838 453 aa25.23■■□□□ 1.63
NPAS3-203ENST00000357798 TMED2Q15363 201 aa25.23■■□□□ 1.63
NPAS3-203ENST00000357798 SHROOM1Q2M3G4 852 aaPredicted RBP25.23■■□□□ 1.63
NPAS3-203ENST00000357798 WASHC2DQ5SRD0 308 aa25.23■■□□□ 1.63
NPAS3-203ENST00000357798 FAM13CQ8NE31 585 aa25.23■■□□□ 1.63
NPAS3-203ENST00000357798 WDR11Q9BZH6 1224 aa25.23■■□□□ 1.63
NPAS3-203ENST00000357798 LRRC4BQ9NT99 713 aa25.23■■□□□ 1.63
NPAS3-203ENST00000357798 PHTF1Q9UMS5 762 aa25.23■■□□□ 1.63
NPAS3-203ENST00000357798 PRPF4O43172 522 aaKnown RBP eCLIP25.23■■□□□ 1.63
NPAS3-203ENST00000357798 HHIPL2Q6UWX4 724 aa25.23■■□□□ 1.63
NPAS3-203ENST00000357798 PPM1KQ8N3J5 372 aa25.23■■□□□ 1.63
NPAS3-203ENST00000357798 CEP120Q8N960 986 aa25.23■■□□□ 1.63
NPAS3-203ENST00000357798 PLEKHO2Q8TD55 490 aa25.23■■□□□ 1.63
NPAS3-203ENST00000357798 DENND1AQ8TEH3 1009 aa25.23■■□□□ 1.63
NPAS3-203ENST00000357798 PWWP2AQ96N64 755 aa25.23■■□□□ 1.63
NPAS3-203ENST00000357798 ACP6Q9NPH0 428 aa25.23■■□□□ 1.63
NPAS3-203ENST00000357798 CCNL1Q9UK58 526 aaPredicted RBP25.23■■□□□ 1.63
NPAS3-203ENST00000357798 ZNF536O15090 1300 aa25.23■■□□□ 1.63
NPAS3-203ENST00000357798 TARSP26639 723 aaKnown RBP25.22■■□□□ 1.63
NPAS3-203ENST00000357798 MAPK4P31152 587 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 RAD23BP54727 409 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 NFIAQ12857 509 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 PTF1AQ7RTS3 328 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 TRABD2AQ86V40 505 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 KIAA0825Q8IV33 1275 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 APLFQ8IW19 511 aaPredicted RBP25.22■■□□□ 1.63
NPAS3-203ENST00000357798 CCDC89Q8N998 374 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 CBWD1Q9BRT8 395 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 ANAPC7Q9UJX3 599 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 A0A1W2PRG0 241 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 NDUFB10O96000 172 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 ATP6V1C1P21283 382 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 RASSF2P50749 326 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 SPARCL1Q14515 664 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.22■■□□□ 1.63
NPAS3-203ENST00000357798 LMNTD2Q8IXW0 634 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 HERPUD2Q9BSE4 406 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 HSPBP1Q9NZL4 362 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 HAO1Q9UJM8 370 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 ATRNL1Q5VV63 1379 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 RRM1P23921 792 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 SLC1A1P43005 524 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 ADCY1Q08828 1119 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 IZUMO3Q5VZ72 239 aa25.22■■□□□ 1.63
NPAS3-203ENST00000357798 TISP43B9A030 160 aa25.21■■□□□ 1.63
NPAS3-203ENST00000357798 PEX19P40855 299 aa25.21■■□□□ 1.63
NPAS3-203ENST00000357798 MCCD1P59942 119 aaPredicted RBP25.21■■□□□ 1.63
NPAS3-203ENST00000357798 APOBEC3HQ6NTF7 200 aaKnown RBP25.21■■□□□ 1.63
NPAS3-203ENST00000357798 TDRPQ86YL5 185 aa25.21■■□□□ 1.63
NPAS3-203ENST00000357798 KIFAP3Q92845 792 aa25.21■■□□□ 1.63
NPAS3-203ENST00000357798 C9orf72Q96LT7 481 aa25.21■■□□□ 1.63
NPAS3-203ENST00000357798 PAIP2Q9BPZ3 127 aaKnown RBP25.21■■□□□ 1.63
NPAS3-203ENST00000357798 KIAA1683Q9H0B3 1180 aa25.21■■□□□ 1.63
NPAS3-203ENST00000357798 UNC45AQ9H3U1 944 aa25.21■■□□□ 1.63
NPAS3-203ENST00000357798 LARSQ9P2J5 1176 aaKnown RBP25.21■■□□□ 1.63
NPAS3-203ENST00000357798 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.21■■□□□ 1.63
NPAS3-203ENST00000357798 TRAFD1O14545 582 aaPredicted RBP25.21■■□□□ 1.63
NPAS3-203ENST00000357798 SCNN1DP51172 638 aa25.21■■□□□ 1.63
NPAS3-203ENST00000357798 MRPS35P82673 323 aaKnown RBP25.21■■□□□ 1.63
NPAS3-203ENST00000357798 DNAJC3Q13217 504 aa25.21■■□□□ 1.63
NPAS3-203ENST00000357798 TRAPPC3LQ5T215 181 aa25.21■■□□□ 1.63
NPAS3-203ENST00000357798 ANO7Q6IWH7 933 aa25.21■■□□□ 1.63
NPAS3-203ENST00000357798 TMEM179Q6ZVK1 233 aa25.21■■□□□ 1.63
NPAS3-203ENST00000357798 ZNF365Q70YC5 407 aa25.21■■□□□ 1.63
NPAS3-203ENST00000357798 ZFPM1Q8IX07 1006 aa25.21■■□□□ 1.63
NPAS3-203ENST00000357798 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP25.21■■□□□ 1.63
NPAS3-203ENST00000357798 DDX1Q92499 740 aaKnown RBP25.21■■□□□ 1.63
NPAS3-203ENST00000357798 SLC7A6OSQ96CW6 309 aaPredicted RBP25.21■■□□□ 1.63
NPAS3-203ENST00000357798 SH3GL3Q99963 347 aa25.21■■□□□ 1.63
NPAS3-203ENST00000357798 LXNQ9BS40 222 aa25.21■■□□□ 1.63
NPAS3-203ENST00000357798 R3HDM2Q9Y2K5 976 aaKnown RBP25.21■■□□□ 1.63
NPAS3-203ENST00000357798 PTP4A2Q12974 167 aa25.2■■□□□ 1.62
NPAS3-203ENST00000357798 CLEC16AQ2KHT3 1053 aa25.2■■□□□ 1.62
NPAS3-203ENST00000357798 LONP2Q86WA8 852 aa25.2■■□□□ 1.62
NPAS3-203ENST00000357798 LARGE2Q8N3Y3 721 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms