RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 TRIM7Q9C029 511 aa16.96■□□□□ 0.31
PHTF1-201ENST00000357783 ZDHHC18Q9NUE0 388 aa16.96■□□□□ 0.31
PHTF1-201ENST00000357783 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.96■□□□□ 0.31
PHTF1-201ENST00000357783 BCCIPQ9P287 314 aaKnown RBP eCLIP16.96■□□□□ 0.31
PHTF1-201ENST00000357783 ANAPC7Q9UJX3 599 aa16.96■□□□□ 0.31
PHTF1-201ENST00000357783 PCDHA3Q9Y5H8 950 aa16.96■□□□□ 0.31
PHTF1-201ENST00000357783 PPP2R3BQ9Y5P8 575 aa16.96■□□□□ 0.31
PHTF1-201ENST00000357783 KIAA0391O15091 583 aaKnown RBP16.96■□□□□ 0.3
PHTF1-201ENST00000357783 C4BPAP04003 597 aaKnown RBP16.96■□□□□ 0.3
PHTF1-201ENST00000357783 EDN1P05305 212 aa16.96■□□□□ 0.3
PHTF1-201ENST00000357783 ARL2P36404 184 aa16.96■□□□□ 0.3
PHTF1-201ENST00000357783 CLDN10P78369 228 aa16.96■□□□□ 0.3
PHTF1-201ENST00000357783 SH3D19Q5HYK7 790 aa16.96■□□□□ 0.3
PHTF1-201ENST00000357783 C1orf131Q8NDD1 294 aaKnown RBP16.96■□□□□ 0.3
PHTF1-201ENST00000357783 FBXO40Q9UH90 709 aa16.96■□□□□ 0.3
PHTF1-201ENST00000357783 SIP14410 1827 aa16.95■□□□□ 0.3
PHTF1-201ENST00000357783 VNN1O95497 513 aa16.95■□□□□ 0.3
PHTF1-201ENST00000357783 GGPS1O95749 300 aa16.95■□□□□ 0.3
PHTF1-201ENST00000357783 RWDD2BP57060 319 aa16.95■□□□□ 0.3
PHTF1-201ENST00000357783 R3HDM1Q15032 1099 aaKnown RBP16.95■□□□□ 0.3
PHTF1-201ENST00000357783 SEZ6Q53EL9 994 aa16.95■□□□□ 0.3
PHTF1-201ENST00000357783 LLGL2Q6P1M3 1020 aa16.95■□□□□ 0.3
PHTF1-201ENST00000357783 CCDC137Q6PK04 289 aaKnown RBP16.95■□□□□ 0.3
PHTF1-201ENST00000357783 LBX2Q6XYB7 198 aa16.95■□□□□ 0.3
PHTF1-201ENST00000357783 STYXL1Q9Y6J8 313 aa16.95■□□□□ 0.3
PHTF1-201ENST00000357783 GSTTP1A0A1W2PQM5 241 aa16.95■□□□□ 0.3
PHTF1-201ENST00000357783 UNGP13051 313 aaPredicted RBP16.95■□□□□ 0.3
PHTF1-201ENST00000357783 MAPK4P31152 587 aa16.95■□□□□ 0.3
PHTF1-201ENST00000357783 SSTR3P32745 418 aaPredicted RBP16.95■□□□□ 0.3
PHTF1-201ENST00000357783 EEPD1Q7L9B9 569 aa16.95■□□□□ 0.3
PHTF1-201ENST00000357783 NCAPG2Q86XI2 1143 aa16.95■□□□□ 0.3
PHTF1-201ENST00000357783 PCYT2Q99447 389 aa16.95■□□□□ 0.3
PHTF1-201ENST00000357783 KCNG1Q9UIX4 513 aa16.95■□□□□ 0.3
PHTF1-201ENST00000357783 MTUS1Q9ULD2 1270 aa16.95■□□□□ 0.3
PHTF1-201ENST00000357783 PTPN22Q9Y2R2 807 aa16.95■□□□□ 0.3
PHTF1-201ENST00000357783 PCDHB2Q9Y5E7 798 aa16.95■□□□□ 0.3
PHTF1-201ENST00000357783 PPFIA2O75334 1257 aa16.94■□□□□ 0.3
PHTF1-201ENST00000357783 FARP2O94887 1054 aaPredicted RBP16.94■□□□□ 0.3
PHTF1-201ENST00000357783 ERLIN2O94905 339 aa16.94■□□□□ 0.3
PHTF1-201ENST00000357783 RARAP10276 462 aa16.94■□□□□ 0.3
PHTF1-201ENST00000357783 RRM1P23921 792 aa16.94■□□□□ 0.3
PHTF1-201ENST00000357783 ZDHHC24Q6UX98 284 aa16.94■□□□□ 0.3
PHTF1-201ENST00000357783 MCOLN2Q8IZK6 566 aa16.94■□□□□ 0.3
PHTF1-201ENST00000357783 FBXO25Q8TCJ0 367 aa16.94■□□□□ 0.3
PHTF1-201ENST00000357783 APOBEC3GQ9HC16 384 aaKnown RBP16.94■□□□□ 0.3
PHTF1-201ENST00000357783 LRRC4CQ9HCJ2 640 aa16.94■□□□□ 0.3
PHTF1-201ENST00000357783 PCYOX1Q9UHG3 505 aa16.94■□□□□ 0.3
PHTF1-201ENST00000357783 ANKRD65E5RJM6 399 aa16.94■□□□□ 0.3
PHTF1-201ENST00000357783 SCP2P22307 547 aa16.94■□□□□ 0.3
PHTF1-201ENST00000357783 RPL21P46778 160 aaKnown RBP16.94■□□□□ 0.3
PHTF1-201ENST00000357783 RUFY4Q6ZNE9 571 aa16.94■□□□□ 0.3
PHTF1-201ENST00000357783 GADL1Q6ZQY3 521 aa16.94■□□□□ 0.3
PHTF1-201ENST00000357783 PASD1Q8IV76 773 aa16.94■□□□□ 0.3
PHTF1-201ENST00000357783 CCDC105Q8IYK2 499 aa16.94■□□□□ 0.3
PHTF1-201ENST00000357783 FAM81BQ96LP2 452 aa16.94■□□□□ 0.3
PHTF1-201ENST00000357783 CEP89Q96ST8 783 aa16.94■□□□□ 0.3
PHTF1-201ENST00000357783 NIFKQ9BYG3 293 aaKnown RBP16.94■□□□□ 0.3
PHTF1-201ENST00000357783 TXLNGYQ9BZA5 131 aa16.94■□□□□ 0.3
PHTF1-201ENST00000357783 SOWAHBA6NEL2 793 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 VGLL3A8MV65 326 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 MYO1CO00159 1063 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 CLDN3O15551 220 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 KCNJ1P48048 391 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 DRP2Q13474 957 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 CAPSQ13938 189 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 SLFN12LQ6IEE8 588 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 PAGR1Q9BTK6 254 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 GRHL1Q9NZI5 618 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 PCDHB4Q9Y5E5 795 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 MROH7Q68CQ1 1323 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 IGKV6D-21A0A0A0MT36 114 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 A6NNZ2 444 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 PIGRP01833 764 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 CFHP08603 1231 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 LSP1P33241 339 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 NSFP46459 744 aaKnown RBP16.93■□□□□ 0.3
PHTF1-201ENST00000357783 IFFO1Q0D2I5 559 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 MKRN4PQ13434 485 aaPredicted RBP16.93■□□□□ 0.3
PHTF1-201ENST00000357783 CUL2Q13617 745 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 SIX1Q15475 284 aaPredicted RBP16.93■□□□□ 0.3
PHTF1-201ENST00000357783 KRT71Q3SY84 523 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 TUBB8Q3ZCM7 444 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 TMEM270Q6UE05 265 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 GPC2Q8N158 579 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 OR5B17Q8NGF7 314 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 CYFIP2Q96F07 1278 aa16.93■□□□□ 0.3
PHTF1-201ENST00000357783 UMODL1Q5DID0 1318 aa16.92■□□□□ 0.3
PHTF1-201ENST00000357783 A0A0B4J269 797 aa16.92■□□□□ 0.3
PHTF1-201ENST00000357783 TRIM66O15016 1216 aa16.92■□□□□ 0.3
PHTF1-201ENST00000357783 COILP38432 576 aaPredicted RBP16.92■□□□□ 0.3
PHTF1-201ENST00000357783 STAT5BP51692 787 aa16.92■□□□□ 0.3
PHTF1-201ENST00000357783 EMC10Q5UCC4 262 aa16.92■□□□□ 0.3
PHTF1-201ENST00000357783 RIOX2Q8IUF8 465 aa16.92■□□□□ 0.3
PHTF1-201ENST00000357783 SGIP1Q9BQI5 828 aa16.92■□□□□ 0.3
PHTF1-201ENST00000357783 MAF1Q9H063 256 aa16.92■□□□□ 0.3
PHTF1-201ENST00000357783 TTLL13PA6NNM8 815 aa16.92■□□□□ 0.3
PHTF1-201ENST00000357783 ACO1P21399 889 aaKnown RBP16.92■□□□□ 0.3
PHTF1-201ENST00000357783 RFC5P40937 340 aa16.92■□□□□ 0.3
PHTF1-201ENST00000357783 DRG2P55039 364 aaKnown RBP16.92■□□□□ 0.3
PHTF1-201ENST00000357783 BPIFB4P59827 614 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms