RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 EEF1GP26641 437 aaKnown RBP27.51■■■□□ 2
SSBP3-202ENST00000357475 GUCY2FP51841 1108 aa27.51■■■□□ 2
SSBP3-202ENST00000357475 MCCD1P59942 119 aaPredicted RBP27.51■■■□□ 2
SSBP3-202ENST00000357475 POU5F1Q01860 360 aaKnown RBP27.51■■■□□ 2
SSBP3-202ENST00000357475 MIIPQ5JXC2 388 aa27.51■■■□□ 2
SSBP3-202ENST00000357475 CASD1Q96PB1 797 aa27.51■■■□□ 2
SSBP3-202ENST00000357475 CGRRF1Q99675 332 aa27.51■■■□□ 2
SSBP3-202ENST00000357475 TUBGCP2Q9BSJ2 902 aa27.51■■■□□ 2
SSBP3-202ENST00000357475 HCSTQ9UBK5 93 aa27.51■■■□□ 2
SSBP3-202ENST00000357475 LIMA1Q9UHB6 759 aaKnown RBP27.51■■■□□ 2
SSBP3-202ENST00000357475 CLDN10P78369 228 aa27.51■■□□□ 1.99
SSBP3-202ENST00000357475 RASIP1Q5U651 963 aa27.51■■□□□ 1.99
SSBP3-202ENST00000357475 KIF12Q96FN5 646 aa27.51■■□□□ 1.99
SSBP3-202ENST00000357475 FNBP1Q96RU3 617 aa27.51■■□□□ 1.99
SSBP3-202ENST00000357475 ASB7Q9H672 318 aa27.51■■□□□ 1.99
SSBP3-202ENST00000357475 CACNG4Q9UBN1 327 aa27.51■■□□□ 1.99
SSBP3-202ENST00000357475 TUBGCP4Q9UGJ1 667 aa27.51■■□□□ 1.99
SSBP3-202ENST00000357475 AP5Z1O43299 807 aa27.5■■□□□ 1.99
SSBP3-202ENST00000357475 B4GALT3O60512 393 aa27.5■■□□□ 1.99
SSBP3-202ENST00000357475 KCNE1P15382 129 aa27.5■■□□□ 1.99
SSBP3-202ENST00000357475 TNNI1P19237 187 aa27.5■■□□□ 1.99
SSBP3-202ENST00000357475 GCLMP48507 274 aa27.5■■□□□ 1.99
SSBP3-202ENST00000357475 SOX4Q06945 474 aaPredicted RBP27.5■■□□□ 1.99
SSBP3-202ENST00000357475 NAB2Q15742 525 aa27.5■■□□□ 1.99
SSBP3-202ENST00000357475 GLB1LQ6UWU2 654 aa27.5■■□□□ 1.99
SSBP3-202ENST00000357475 MTMR12Q9C0I1 747 aa27.5■■□□□ 1.99
SSBP3-202ENST00000357475 VPS16Q9H269 839 aa27.5■■□□□ 1.99
SSBP3-202ENST00000357475 UBN1Q9NPG3 1134 aa27.5■■□□□ 1.99
SSBP3-202ENST00000357475 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.5■■□□□ 1.99
SSBP3-202ENST00000357475 INPPL1O15357 1258 aa27.49■■□□□ 1.99
SSBP3-202ENST00000357475 DGKIO75912 1065 aa27.49■■□□□ 1.99
SSBP3-202ENST00000357475 PRKCSHP14314 528 aaPredicted RBP27.49■■□□□ 1.99
SSBP3-202ENST00000357475 TFAMQ00059 246 aaKnown RBP27.49■■□□□ 1.99
SSBP3-202ENST00000357475 HSP90AA2PQ14568 343 aaPredicted RBP27.49■■□□□ 1.99
SSBP3-202ENST00000357475 TMEM132DQ14C87 1099 aa27.49■■□□□ 1.99
SSBP3-202ENST00000357475 ZBTB6Q15916 424 aa27.49■■□□□ 1.99
SSBP3-202ENST00000357475 MAN2A1Q16706 1144 aa27.49■■□□□ 1.99
SSBP3-202ENST00000357475 CBWD6Q4V339 395 aa27.49■■□□□ 1.99
SSBP3-202ENST00000357475 PAN2Q504Q3 1202 aaKnown RBP27.49■■□□□ 1.99
SSBP3-202ENST00000357475 CBWD3Q5JTY5 395 aa27.49■■□□□ 1.99
SSBP3-202ENST00000357475 CBWD5Q5RIA9 395 aa27.49■■□□□ 1.99
SSBP3-202ENST00000357475 PPP1R10Q96QC0 940 aaKnown RBP27.49■■□□□ 1.99
SSBP3-202ENST00000357475 RPS6KC1Q96S38 1066 aa27.49■■□□□ 1.99
SSBP3-202ENST00000357475 UBE2OQ9C0C9 1292 aaKnown RBP27.49■■□□□ 1.99
SSBP3-202ENST00000357475 GOLGA2P5Q9HBQ8 144 aa27.49■■□□□ 1.99
SSBP3-202ENST00000357475 INTS13Q9NVM9 706 aa27.49■■□□□ 1.99
SSBP3-202ENST00000357475 GBF1Q92538 1859 aa27.48■■□□□ 1.99
SSBP3-202ENST00000357475 COPB1P53618 953 aaKnown RBP27.48■■□□□ 1.99
SSBP3-202ENST00000357475 TPM4P67936 248 aa27.48■■□□□ 1.99
SSBP3-202ENST00000357475 KCNH2Q12809 1159 aa27.48■■□□□ 1.99
SSBP3-202ENST00000357475 NOMO2Q5JPE7 1267 aa27.48■■□□□ 1.99
SSBP3-202ENST00000357475 WDR49Q8IV35 697 aa27.48■■□□□ 1.99
SSBP3-202ENST00000357475 SLC4A7Q9Y6M7 1214 aa27.48■■□□□ 1.99
SSBP3-202ENST00000357475 TBKBP1A7MCY6 615 aa27.47■■□□□ 1.99
SSBP3-202ENST00000357475 FANCCQ00597 558 aa27.47■■□□□ 1.99
SSBP3-202ENST00000357475 CD302Q8IX05 232 aa27.47■■□□□ 1.99
SSBP3-202ENST00000357475 TMEM117Q9H0C3 514 aa27.47■■□□□ 1.99
SSBP3-202ENST00000357475 RC3H2Q9HBD1 1191 aaKnown RBP27.47■■□□□ 1.99
SSBP3-202ENST00000357475 TBC1D13Q9NVG8 400 aa27.47■■□□□ 1.99
SSBP3-202ENST00000357475 LRRN2O75325 713 aa27.46■■□□□ 1.99
SSBP3-202ENST00000357475 SURF1Q15526 300 aa27.46■■□□□ 1.99
SSBP3-202ENST00000357475 PTPN21Q16825 1174 aa27.46■■□□□ 1.99
SSBP3-202ENST00000357475 VWA3BQ502W6 1294 aa27.46■■□□□ 1.99
SSBP3-202ENST00000357475 TDRD10Q5VZ19 366 aaKnown RBP27.46■■□□□ 1.99
SSBP3-202ENST00000357475 FAM109BQ6ICB4 259 aaPredicted RBP27.46■■□□□ 1.99
SSBP3-202ENST00000357475 ZNF280BQ86YH2 543 aa27.46■■□□□ 1.99
SSBP3-202ENST00000357475 ABI1Q8IZP0 508 aa27.46■■□□□ 1.99
SSBP3-202ENST00000357475 RABGGTAQ92696 567 aa27.46■■□□□ 1.99
SSBP3-202ENST00000357475 RNPC3Q96LT9 517 aaKnown RBP27.46■■□□□ 1.99
SSBP3-202ENST00000357475 NAP1L5Q96NT1 182 aaPredicted RBP27.46■■□□□ 1.99
SSBP3-202ENST00000357475 C2CD2Q9Y426 696 aa27.46■■□□□ 1.99
SSBP3-202ENST00000357475 C4BPAP04003 597 aaKnown RBP27.46■■□□□ 1.99
SSBP3-202ENST00000357475 C15orf39Q6ZRI6 1047 aa27.46■■□□□ 1.99
SSBP3-202ENST00000357475 SV2AQ7L0J3 742 aa27.46■■□□□ 1.99
SSBP3-202ENST00000357475 C1orf127Q8N9H9 656 aa27.46■■□□□ 1.99
SSBP3-202ENST00000357475 ELMO3Q96BJ8 720 aa27.46■■□□□ 1.99
SSBP3-202ENST00000357475 ZNF689Q96CS4 500 aaPredicted RBP27.46■■□□□ 1.99
SSBP3-202ENST00000357475 DERAQ9Y315 318 aa27.46■■□□□ 1.99
SSBP3-202ENST00000357475 LAMA3Q16787 3333 aa27.46■■□□□ 1.99
SSBP3-202ENST00000357475 LRRC10BA6NIK2 292 aa27.45■■□□□ 1.98
SSBP3-202ENST00000357475 GRXCR1A8MXD5 290 aa27.45■■□□□ 1.98
SSBP3-202ENST00000357475 DDHD2O94830 711 aa27.45■■□□□ 1.98
SSBP3-202ENST00000357475 GJB5O95377 273 aa27.45■■□□□ 1.98
SSBP3-202ENST00000357475 AFPP02771 609 aaKnown RBP27.45■■□□□ 1.98
SSBP3-202ENST00000357475 THP07101 528 aa27.45■■□□□ 1.98
SSBP3-202ENST00000357475 IGFBP6P24592 240 aaPredicted RBP27.45■■□□□ 1.98
SSBP3-202ENST00000357475 MLLT1Q03111 559 aaPredicted RBP27.45■■□□□ 1.98
SSBP3-202ENST00000357475 ENPEPQ07075 957 aa27.45■■□□□ 1.98
SSBP3-202ENST00000357475 HERC6Q8IVU3 1022 aa27.45■■□□□ 1.98
SSBP3-202ENST00000357475 CXorf38Q8TB03 319 aa27.45■■□□□ 1.98
SSBP3-202ENST00000357475 PAAF1Q9BRP4 392 aa27.45■■□□□ 1.98
SSBP3-202ENST00000357475 NDST4Q9H3R1 872 aa27.45■■□□□ 1.98
SSBP3-202ENST00000357475 KIAA1671Q9BY89 1806 aa27.45■■□□□ 1.98
SSBP3-202ENST00000357475 SCN1AP35498 2009 aa27.44■■□□□ 1.98
SSBP3-202ENST00000357475 FSD2A1L4K1 749 aa27.44■■□□□ 1.98
SSBP3-202ENST00000357475 PPEF2O14830 753 aa27.44■■□□□ 1.98
SSBP3-202ENST00000357475 HOXA2O43364 376 aa27.44■■□□□ 1.98
SSBP3-202ENST00000357475 SERPINC1P01008 464 aa27.44■■□□□ 1.98
SSBP3-202ENST00000357475 TMEM191BP0C7N4 346 aa27.44■■□□□ 1.98
SSBP3-202ENST00000357475 ATP2A2P16615 1042 aaKnown RBP27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms