RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 YTHDF3Q7Z739 585 aaKnown RBP7.26□□□□□ -1.25
RTN4-203ENST00000357376 PRUNE1Q86TP1 453 aa7.26□□□□□ -1.25
RTN4-203ENST00000357376 C3orf20Q8ND61 904 aa7.26□□□□□ -1.25
RTN4-203ENST00000357376 EPS8L1Q8TE68 723 aa7.26□□□□□ -1.25
RTN4-203ENST00000357376 HSPH1Q92598 858 aa7.26□□□□□ -1.25
RTN4-203ENST00000357376 TMEM143Q96AN5 459 aa7.26□□□□□ -1.25
RTN4-203ENST00000357376 STAMBPL1Q96FJ0 436 aa7.26□□□□□ -1.25
RTN4-203ENST00000357376 FAM81BQ96LP2 452 aa7.26□□□□□ -1.25
RTN4-203ENST00000357376 RPS6KC1Q96S38 1066 aa7.26□□□□□ -1.25
RTN4-203ENST00000357376 RIT2Q99578 217 aa7.26□□□□□ -1.25
RTN4-203ENST00000357376 POLR3FQ9H1D9 316 aaPredicted RBP7.26□□□□□ -1.25
RTN4-203ENST00000357376 TMEM8AQ9HCN3 771 aa7.26□□□□□ -1.25
RTN4-203ENST00000357376 RBAKQ9NYW8 714 aaPredicted RBP7.26□□□□□ -1.25
RTN4-203ENST00000357376 VAV3Q9UKW4 847 aa7.26□□□□□ -1.25
RTN4-203ENST00000357376 TRPC5Q9UL62 973 aaPredicted RBP7.26□□□□□ -1.25
RTN4-203ENST00000357376 SCINQ9Y6U3 715 aa7.26□□□□□ -1.25
RTN4-203ENST00000357376 FRMPD4Q14CM0 1322 aa7.26□□□□□ -1.25
RTN4-203ENST00000357376 RNF8O76064 485 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 GJB6O95452 261 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 BAG2O95816 211 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 MAGEA4P43358 317 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 KRT76Q01546 638 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 CAV1Q03135 178 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 SMAD1Q15797 465 aaKnown RBP7.25□□□□□ -1.25
RTN4-203ENST00000357376 CDO1Q16878 200 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 C11orf63Q6NUN7 778 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 RFX8Q6ZV50 586 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 CPNE8Q86YQ8 564 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 THNSL1Q8IYQ7 743 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 EIF1ADQ8N9N8 165 aaKnown RBP7.25□□□□□ -1.25
RTN4-203ENST00000357376 MAML1Q92585 1016 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 TAAR1Q96RJ0 339 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 HSD17B14Q9BPX1 270 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 KDM4CQ9H3R0 1056 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 SIX2Q9NPC8 291 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 ZNF277Q9NRM2 450 aaPredicted RBP7.25□□□□□ -1.25
RTN4-203ENST00000357376 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.25□□□□□ -1.25
RTN4-203ENST00000357376 TXNDC16Q9P2K2 825 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 NEU2Q9Y3R4 380 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 UBE4BO95155 1302 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 MYH13Q9UKX3 1938 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 DDX3YO15523 660 aaKnown RBP7.25□□□□□ -1.25
RTN4-203ENST00000357376 CIB2O75838 187 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 ATP6V1G2O95670 118 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 PSAPP07602 524 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 PSMA2P25787 234 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 TARSP26639 723 aaKnown RBP7.25□□□□□ -1.25
RTN4-203ENST00000357376 CDC25CP30307 473 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 HSPA1LP34931 641 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 RARRES1P49788 294 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 AFF2P51816 1311 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 TTLL12Q14166 644 aaPredicted RBP7.25□□□□□ -1.25
RTN4-203ENST00000357376 ACAD10Q6JQN1 1059 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 LLGL2Q6P1M3 1020 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 KCNV1Q6PIU1 500 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 FOXR2Q6PJQ5 311 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 SV2AQ7L0J3 742 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 ERICH1Q86X53 443 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 CFAP61Q8NHU2 1237 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 PRCCQ92733 491 aaPredicted RBP7.25□□□□□ -1.25
RTN4-203ENST00000357376 PGM2Q96G03 612 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 ROPN1BQ9BZX4 212 aaPredicted RBP7.25□□□□□ -1.25
RTN4-203ENST00000357376 TRIM6Q9C030 488 aaPredicted RBP7.25□□□□□ -1.25
RTN4-203ENST00000357376 ROPN1Q9HAT0 212 aaPredicted RBP7.25□□□□□ -1.25
RTN4-203ENST00000357376 NPHS2Q9NP85 383 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 RNF146Q9NTX7 359 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 ZFP69BQ9UJL9 534 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 AGO2Q9UKV8 859 aaKnown RBP7.25□□□□□ -1.25
RTN4-203ENST00000357376 TBX20Q9UMR3 447 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 SUFUQ9UMX1 484 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 FAM47DPA6NHR8 397 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 H0YCG3 227 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 INO80B-WBP1J3KQ70 363 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 PSMD10O75832 226 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 HLA-DRAP01903 254 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 CCND2P30279 289 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 RAD23BP54727 409 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 COPS2P61201 443 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 RPS6P62753 249 aaKnown RBP7.25□□□□□ -1.25
RTN4-203ENST00000357376 SPP2Q13103 211 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 KRT81Q14533 505 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 PPP2R5DQ14738 602 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 STAT4Q14765 748 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 SMTNL2Q2TAL5 461 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 C15orf52Q6ZUT6 534 aaKnown RBP7.25□□□□□ -1.25
RTN4-203ENST00000357376 PDIK1LQ8N165 341 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 RASGEF1CQ8N431 466 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 PDCD7Q8N8D1 485 aaKnown RBP7.25□□□□□ -1.25
RTN4-203ENST00000357376 KCTD6Q8NC69 237 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 GMCL1P1Q8NEA9 526 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 CCDC110Q8TBZ0 833 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 CCHCR1Q8TD31 782 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 SPDL1Q96EA4 605 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 CFAP36Q96G28 342 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 RBM41Q96IZ5 413 aaKnown RBP7.25□□□□□ -1.25
RTN4-203ENST00000357376 SERPINB12Q96P63 405 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 MCEEQ96PE7 176 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 INO80BQ9C086 356 aaPredicted RBP7.25□□□□□ -1.25
RTN4-203ENST00000357376 ATP6V0A4Q9HBG4 840 aa7.25□□□□□ -1.25
RTN4-203ENST00000357376 PCDHA10Q9Y5I2 948 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms