RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 PPP4R3CPQ6ZMV5 832 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 ZNF571Q7Z3V5 609 aaPredicted RBP13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 TMC3Q7Z5M5 1100 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 KCTD17Q8N5Z5 321 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 METTL13Q8N6R0 699 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 PPTC7Q8NI37 304 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 RAET1EQ8TD07 263 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 RAPGEF5Q92565 580 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 TMEM143Q96AN5 459 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 PARVGQ9HBI0 331 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 SUCLA2Q9P2R7 463 aaPredicted RBP13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 SRRDQ9UH36 339 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 FBXL5Q9UKA1 691 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 GNEQ9Y223 722 aaKnown RBP13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 FRMD3A2A2Y4 597 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 FKTNO75072 461 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 DNAJC8O75937 253 aaPredicted RBP13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 MYCP01106 439 aaPredicted RBP13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 DRD4P21917 467 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 DNA2P51530 1060 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 RNASE9P60153 205 aaKnown RBP13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 C1QTNF8P60827 252 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 PTK2Q05397 1052 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 CACNB2Q08289 660 aaPredicted RBP13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 CYB5D1Q6P9G0 228 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 FAM228AQ86W67 206 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 PARP9Q8IXQ6 854 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 TPCN2Q8NHX9 752 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 CCT6BQ92526 530 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 CCDC114Q96M63 670 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 KIFC3Q9BVG8 833 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 CFHR5Q9BXR6 569 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 KDM4CQ9H3R0 1056 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 SMARCAD1Q9H4L7 1026 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 CNOT10Q9H9A5 744 aaKnown RBP13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 INTUQ9ULD6 942 aa13.62□□□□□ -0.23
RTFDC1-202ENST00000357348 CASP8AP2Q9UKL3 1982 aa13.61□□□□□ -0.23
RTFDC1-202ENST00000357348 ADCY3O60266 1144 aa13.61□□□□□ -0.23
RTFDC1-202ENST00000357348 CEP104O60308 925 aa13.61□□□□□ -0.23
RTFDC1-202ENST00000357348 CCND3P30281 292 aaPredicted RBP13.61□□□□□ -0.23
RTFDC1-202ENST00000357348 PEX3P56589 373 aa13.61□□□□□ -0.23
RTFDC1-202ENST00000357348 IFFO1Q0D2I5 559 aa13.61□□□□□ -0.23
RTFDC1-202ENST00000357348 DDX42Q86XP3 938 aaKnown RBP eCLIP13.61□□□□□ -0.23
RTFDC1-202ENST00000357348 FAM178BQ8IXR5 827 aa13.61□□□□□ -0.23
RTFDC1-202ENST00000357348 SCFD1Q8WVM8 642 aa13.61□□□□□ -0.23
RTFDC1-202ENST00000357348 XPNPEP1Q9NQW7 623 aa13.61□□□□□ -0.23
RTFDC1-202ENST00000357348 FAM114A2Q9NRY5 505 aa13.61□□□□□ -0.23
RTFDC1-202ENST00000357348 NRBP2Q9NSY0 501 aa13.61□□□□□ -0.23
RTFDC1-202ENST00000357348 NAGPAQ9UK23 515 aa13.61□□□□□ -0.23
RTFDC1-202ENST00000357348 NOC2LQ9Y3T9 749 aaKnown RBP13.61□□□□□ -0.23
RTFDC1-202ENST00000357348 F8VZ95 297 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 PPFIA2O75334 1257 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 LGR5O75473 907 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 PGK1P00558 417 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 PRKAR2AP13861 404 aaKnown RBP13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 TMOD1P28289 359 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 RDXP35241 583 aaKnown RBP13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 FLT3P36888 993 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 SCTRP47872 440 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 EIF3BP55884 814 aaKnown RBP13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 SNCBQ16143 134 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 CACNA2D3Q8IZS8 1091 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 ZNF668Q96K58 619 aaPredicted RBP13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 ERAP1Q9NZ08 941 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 KCND2Q9NZV8 630 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 MYH10P35580 1976 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 MYADML2A6NDP7 307 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 CCDC169A6NNP5 214 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 H3BRB1 525 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 IGHA2P01877 340 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 C6orf222P0C671 652 aaPredicted RBP13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 CYBAP13498 195 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 AKR1A1P14550 325 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 KCNH2Q12809 1159 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 EMC2Q15006 297 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 DGKDQ16760 1214 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 PLPPR4Q7Z2D5 763 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 FRMD5Q7Z6J6 570 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 LRRC71Q8N4P6 559 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 BSNDQ8WZ55 320 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 C16orf70Q9BSU1 422 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 TUT1Q9H6E5 874 aaKnown RBP13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 ATP6V0A4Q9HBG4 840 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 ODF2LQ9ULJ1 636 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 NOVA2Q9UNW9 492 aaKnown RBP13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 TRIM17Q9Y577 477 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 EMSYQ7Z589 1322 aa13.6□□□□□ -0.23
RTFDC1-202ENST00000357348 K7ENM7 598 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 SLC16A4O15374 487 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 MGRN1O60291 552 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 DGAT1O75907 488 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 MYL3P08590 195 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 HOXD10P28358 340 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 PSEN1P49768 467 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 CDR1P51861 262 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 ERMARDQ5T6L9 678 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 CCDC26Q8TAB7 109 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 ATP8B4Q8TF62 1192 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 LMBR1Q8WVP7 490 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms