RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 KDELC2Q7Z4H8 507 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 GUF1Q8N442 669 aaKnown RBP15.66■□□□□ 0.1
LMX1B-201ENST00000355497 PLEKHA8Q96JA3 519 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 NFKBIL1Q9UBC1 381 aaPredicted RBP15.66■□□□□ 0.1
LMX1B-201ENST00000355497 AGO2Q9UKV8 859 aaKnown RBP15.66■□□□□ 0.1
LMX1B-201ENST00000355497 HEG1Q9ULI3 1381 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 GCC2Q8IWJ2 1684 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 C3orf70A6NLC5 250 aaPredicted RBP15.65■□□□□ 0.1
LMX1B-201ENST00000355497 SERPIND1P05546 499 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 NLRP11P59045 1033 aaKnown RBP15.65■□□□□ 0.1
LMX1B-201ENST00000355497 P3H1Q32P28 736 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 DAB2IPQ5VWQ8 1189 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 CDYLQ9Y232 598 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 MORC2Q9Y6X9 1032 aaPredicted RBP15.65■□□□□ 0.1
LMX1B-201ENST00000355497 TEX33O43247 280 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 PHF2O75151 1096 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 FAM107AO95990 144 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 KCNA3P22001 575 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 SERPINB9P50453 376 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 LRRC74AQ0VAA2 488 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 CCDC142Q17RM4 750 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 CCDC144BQ3MJ40 725 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 CDR2LQ86X02 465 aaPredicted RBP15.65■□□□□ 0.1
LMX1B-201ENST00000355497 ZFP42Q96MM3 310 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 POLD4Q9HCU8 107 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 ARHGEF38Q9NXL2 777 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 MPP6Q9NZW5 540 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 IGSF1Q8N6C5 1336 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 VEPH1Q14D04 833 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 SPATA4Q8NEY3 305 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 TRIM8Q9BZR9 551 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 EPC1Q9H2F5 836 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 TRIM49P0CI25 452 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 TRIM49CP0CI26 452 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 DUOXA2Q1HG44 320 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 FOPNLQ96NB1 174 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 RNF146Q9NTX7 359 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 PSMC3IPQ9P2W1 217 aaPredicted RBP15.65■□□□□ 0.1
LMX1B-201ENST00000355497 PCDHB8Q9UN66 801 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 C6orf10Q5SRN2 563 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 CENPPQ6IPU0 288 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 PRUNE1Q86TP1 453 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 HORMAD1Q86X24 394 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 TNIP3Q96KP6 325 aa15.65■□□□□ 0.1
LMX1B-201ENST00000355497 EIF2AK1Q9BQI3 630 aaKnown RBP15.65■□□□□ 0.1
LMX1B-201ENST00000355497 MAP3K20Q9NYL2 800 aaKnown RBP15.65■□□□□ 0.1
LMX1B-201ENST00000355497 RALBP11234 206 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 LRRC36Q1X8D7 754 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 TRMT2AQ8IZ69 625 aaKnown RBP15.64■□□□□ 0.09
LMX1B-201ENST00000355497 APPL2Q8NEU8 664 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 INPP5DQ92835 1189 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 SPATA33Q96N06 139 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 FAM129AQ9BZQ8 928 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 SLC16A3O15427 465 aaKnown RBP15.64■□□□□ 0.09
LMX1B-201ENST00000355497 PPP1R37O75864 691 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 MYL2P10916 166 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 SUSD4Q5VX71 490 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 MMP19Q99542 508 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 BARHL2Q9NY43 387 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 FKBP9O95302 570 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 GUCA1CO95843 209 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 SCP2P22307 547 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 CCDC15Q0P6D6 951 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 FKBP9P1Q75LS8 142 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 PCYOX1LQ8NBM8 494 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 C17orf80Q9BSJ5 609 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 TMEM245Q9H330 911 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 LY9Q9HBG7 655 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 ZCCHC17Q9NP64 241 aaKnown RBP15.64■□□□□ 0.09
LMX1B-201ENST00000355497 PRDM5Q9NQX1 630 aaPredicted RBP15.64■□□□□ 0.09
LMX1B-201ENST00000355497 KLHL11Q9NVR0 708 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 USP15Q9Y4E8 981 aaPredicted RBP15.64■□□□□ 0.09
LMX1B-201ENST00000355497 CYP26A1O43174 497 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 KLHL2O95198 593 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 UGP2Q16851 508 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 MEI1Q5TIA1 1274 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 TMEM154Q6P9G4 183 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 BBS7Q8IWZ6 715 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.64■□□□□ 0.09
LMX1B-201ENST00000355497 IL17RAQ96F46 866 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 MASTLQ96GX5 879 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 SRPK1Q96SB4 655 aaKnown RBP15.64■□□□□ 0.09
LMX1B-201ENST00000355497 LRRC1Q9BTT6 524 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 UTYO14607 1347 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 ADGRL2O95490 1459 aa15.64■□□□□ 0.09
LMX1B-201ENST00000355497 ASMTLO95671 621 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 CYP2E1P05181 493 aaPredicted RBP15.63■□□□□ 0.09
LMX1B-201ENST00000355497 LAMB3Q13751 1172 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 QTRT2Q9H974 415 aaKnown RBP15.63■□□□□ 0.09
LMX1B-201ENST00000355497 SCN3BQ9NY72 215 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 SEPT3Q9UH03 358 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 LIMA1Q9UHB6 759 aaKnown RBP15.63■□□□□ 0.09
LMX1B-201ENST00000355497 XPO7Q9UIA9 1087 aaKnown RBP15.63■□□□□ 0.09
LMX1B-201ENST00000355497 ZNF335Q9H4Z2 1342 aaPredicted RBP15.63■□□□□ 0.09
LMX1B-201ENST00000355497 LZTS3O60299 673 aaPredicted RBP15.63■□□□□ 0.09
LMX1B-201ENST00000355497 GRIK1P39086 918 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 PPP3CCP48454 512 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 CACNB3P54284 484 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 KLC1Q07866 573 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 TRAF7Q6Q0C0 670 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms