RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 DHX34Q14147 1143 aaKnown RBP12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 TRADDQ15628 312 aa12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 ALG11Q2TAA5 492 aa12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 SMU1Q2TAY7 513 aa12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 ATPAF2Q8N5M1 289 aa12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 ATL2Q8NHH9 583 aa12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 TBCDQ9BTW9 1192 aa12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 TRPM5Q9NZQ8 1165 aa12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 CTNNAL1Q9UBT7 734 aa12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 GGT7Q9UJ14 662 aa12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 PADI4Q9UM07 663 aa12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 CASKIN1Q8WXD9 1431 aa12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 B2RBV5 119 aa12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 ECDO95905 644 aaPredicted RBP12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 HLA-DQA2P01906 255 aa12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 CALB1P05937 261 aa12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 ELAC2Q9BQ52 826 aaKnown RBP12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 FAM217BQ9NTX9 383 aaPredicted RBP12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 SPATA2Q9UM82 520 aa12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 PFKFB2O60825 505 aa12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 SOX11P35716 441 aa12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 ANO5Q75V66 913 aa12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 C2orf40Q9H1Z8 148 aa12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 ZNF302Q9NR11 478 aa12.09□□□□□ -0.47
NUDCD3-202ENST00000355451 HEATR9A2RTY3 570 aa12.08□□□□□ -0.47
NUDCD3-202ENST00000355451 ULK3Q6PHR2 472 aa12.08□□□□□ -0.47
NUDCD3-202ENST00000355451 KRT74Q7RTS7 529 aa12.08□□□□□ -0.47
NUDCD3-202ENST00000355451 LRRC49Q8IUZ0 686 aa12.08□□□□□ -0.47
NUDCD3-202ENST00000355451 WDR36Q8NI36 951 aaKnown RBP12.08□□□□□ -0.47
NUDCD3-202ENST00000355451 CARD14Q9BXL6 1004 aa12.08□□□□□ -0.47
NUDCD3-202ENST00000355451 ELL3Q9HB65 397 aaPredicted RBP12.08□□□□□ -0.47
NUDCD3-202ENST00000355451 CHMP2BQ9UQN3 213 aa12.08□□□□□ -0.47
NUDCD3-202ENST00000355451 PCDHGB3Q9Y5G1 929 aa12.08□□□□□ -0.47
NUDCD3-202ENST00000355451 IQCMA0A1B0GVH7 501 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 CXCR5P32302 372 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 ZSCAN26Q16670 478 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 ZCCHC8Q6NZY4 707 aaKnown RBP12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 PPP4R3CPQ6ZMV5 832 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 FAM45AQ8TCE6 357 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 CNBD2Q96M20 576 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 ING3Q9NXR8 418 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 ADAM22Q9P0K1 906 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 CFTRP13569 1480 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 TSC22D2O75157 780 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 USP17L8P0C7I0 530 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 RRM2P31350 389 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 IER5Q5VY09 327 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 TMEM169Q96HH4 297 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 ZNF560Q96MR9 790 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 WDR41Q9HAD4 459 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 BFARQ9NZS9 450 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 GPN3Q9UHW5 284 aaPredicted RBP12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 CLTBP09497 229 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 ROR1Q01973 937 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 STX3Q13277 289 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 NFIL3Q16649 462 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 NEK7Q8TDX7 302 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 OSBPL9Q96SU4 736 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 ZMYND12Q9H0C1 365 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 KLC1Q07866 573 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 C20orf194Q5TEA3 1177 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 TMEM270Q6UE05 265 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 EPM2AIP1Q7L775 607 aaPredicted RBP12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 RBM41Q96IZ5 413 aaKnown RBP12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 TNIP3Q96KP6 325 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 DR1Q01658 176 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 MAGEF1Q9HAY2 307 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 SCN3BQ9NY72 215 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 OR6A2O95222 327 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 TYK2P29597 1187 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 TFDP2Q14188 446 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 STARD3Q14849 445 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 CEP68Q76N32 757 aa12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 MRPL4Q9BYD3 311 aaKnown RBP12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 THG1LQ9NWX6 298 aaKnown RBP12.08□□□□□ -0.48
NUDCD3-202ENST00000355451 LAD1O00515 517 aa12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 C21orf2O43822 256 aa12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 GSPT1P15170 499 aaKnown RBP12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 RHAGQ02094 409 aa12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 SNRNP48Q6IEG0 339 aaKnown RBP12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 MTSS1LQ765P7 747 aa12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 TSPAN17Q96FV3 270 aa12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 MAGED4Q96JG8 741 aa12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 CAMKK2Q96RR4 588 aa12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 SLC9A7Q96T83 725 aa12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 IDI2Q9BXS1 227 aa12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 PITPNM3Q9BZ71 974 aa12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 PIPSLA2A3N6 862 aa12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 CDC40O60508 579 aaKnown RBP eCLIP12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 EDRF1Q3B7T1 1238 aa12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 STAMBPL1Q96FJ0 436 aa12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 NARS2Q96I59 477 aaKnown RBP12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 IGFLR1Q9H665 355 aa12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 CNOT10Q9H9A5 744 aaKnown RBP12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 PCSK1NQ9UHG2 260 aa12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 FLT4P35916 1363 aa12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 CHUKO15111 745 aa12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 CCR4P51679 360 aa12.07□□□□□ -0.48
NUDCD3-202ENST00000355451 SGCGQ13326 291 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms