RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 GRID1Q9ULK0 1009 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 FNDC3AQ9Y2H6 1198 aaKnown RBP13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 TCP10L2B9ZVM9 353 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 WBP4O75554 376 aaKnown RBP13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 CALB2P22676 271 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 PLOD1Q02809 727 aaPredicted RBP13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 RWDD4Q6NW29 188 aaKnown RBP13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 KLHL25Q9H0H3 589 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 FNTAP49354 379 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 ITGA8P53708 1063 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 ENGASEQ8NFI3 743 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 CEP95Q96GE4 821 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 ERGIC2Q96RQ1 377 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 NEMP1O14524 444 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 RASSF9O75901 435 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 SCUBE1Q8IWY4 988 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 NIM1KQ8IY84 436 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 CELF4Q9BZC1 486 aaKnown RBP13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 HERC5Q9UII4 1024 aaKnown RBP13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 LRCH1Q9Y2L9 728 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 FSBPO95073 299 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 FAM47CQ5HY64 1035 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 ARHGAP27Q6ZUM4 889 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 ARHGEF26Q96DR7 871 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 ORAI2Q96SN7 254 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 PAGR1Q9BTK6 254 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 KLHL4Q9C0H6 718 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 BRD8Q9H0E9 1235 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 NEUROG2Q9H2A3 272 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 CDV3Q9UKY7 258 aaKnown RBP13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 CPDO75976 1380 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 ATP9AO75110 1047 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 FAM200BP0CF97 657 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 VCPP55072 806 aaKnown RBP13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 CDH6P55285 790 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 KCNQ4P56696 695 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 OSTNP61366 133 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 JADE3Q92613 823 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 FAM192AQ9GZU8 254 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 RAB21Q9UL25 225 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 PPIP5K2O43314 1243 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 SLC26A4O43511 780 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 KCNA2P16389 499 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 PTPN4P29074 926 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 GEMIN4P57678 1058 aaKnown RBP13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 RAB14P61106 215 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 RBBP8NLQ8NC74 664 aaPredicted RBP13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 TRIM45Q9H8W5 580 aaPredicted RBP13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 PCMTD2Q9NV79 361 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 XPO7Q9UIA9 1087 aaKnown RBP13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 PRR23D1E9PI22 279 aaPredicted RBP13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 NFIBO00712 420 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 DLGAP3O95886 979 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 ALBP02768 609 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 WEE2P0C1S8 567 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 PRR23D2P0DMB1 279 aaPredicted RBP13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 FOXD4Q12950 439 aaPredicted RBP13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 PDXDC2PQ6P474 469 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 MICU2Q8IYU8 434 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 GIMAP8Q8ND71 665 aaPredicted RBP13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 FAM210AQ96ND0 272 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 TMEM47Q9BQJ4 181 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 FAM213AQ9BRX8 229 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 RGL1Q9NZL6 768 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 AIPL1Q9NZN9 384 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 STAP1Q9ULZ2 295 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 EFCAB14O75071 495 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 COILP38432 576 aaPredicted RBP13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 SERPINB8P50452 374 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 OR6B3Q8NGW1 331 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 HEY2Q9UBP5 337 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 PALLDQ8WX93 1383 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 TRIM49P0CI25 452 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 TRIM49CP0CI26 452 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 CPA2P48052 419 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 AP3M2P53677 418 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 UGP2Q16851 508 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 RBM43Q6ZSC3 357 aaKnown RBP13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 C3orf62Q6ZUJ4 267 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 ANKZF1Q9H8Y5 726 aa13.36□□□□□ -0.27
SYNCRIP-201ENST00000355238 HOXA13P31271 388 aaPredicted RBP13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 TRIM69Q86WT6 500 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 TAGAPQ8N103 731 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 IFT43Q96FT9 208 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 DNAJC7Q99615 494 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 SH3GL1Q99961 368 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 MPP6Q9NZW5 540 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 DDX20Q9UHI6 824 aaKnown RBP13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 CAB39Q9Y376 341 aaPredicted RBP13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 ARHGEF5Q12774 1597 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 POTEFA5A3E0 1075 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 UBOX5O94941 541 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 POTEIP0CG38 1075 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 KRT72Q14CN4 511 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 C1orf228Q6PIY5 440 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 POTEGQ6S5H5 508 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 POTEEQ6S8J3 1075 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 LUZP2Q86TE4 346 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 NCAPG2Q86XI2 1143 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms