RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 RINT1Q6NUQ1 792 aa12.61□□□□□ -0.39
CDRT1-202ENST00000354433 ELMSAN1Q6PJG2 1045 aa12.61□□□□□ -0.39
CDRT1-202ENST00000354433 C11orf57Q6ZUT1 292 aaPredicted RBP12.61□□□□□ -0.39
CDRT1-202ENST00000354433 KCNK18Q7Z418 384 aa12.61□□□□□ -0.39
CDRT1-202ENST00000354433 GLYCTKQ8IVS8 523 aa12.61□□□□□ -0.39
CDRT1-202ENST00000354433 TRIM44Q96DX7 344 aaPredicted RBP12.61□□□□□ -0.39
CDRT1-202ENST00000354433 B3GALT6Q96L58 329 aa12.61□□□□□ -0.39
CDRT1-202ENST00000354433 MMTAG2Q9BU76 263 aaKnown RBP12.61□□□□□ -0.39
CDRT1-202ENST00000354433 MAGEF1Q9HAY2 307 aa12.61□□□□□ -0.39
CDRT1-202ENST00000354433 MAN1C1Q9NR34 630 aa12.61□□□□□ -0.39
CDRT1-202ENST00000354433 CCDC39Q9UFE4 941 aa12.61□□□□□ -0.39
CDRT1-202ENST00000354433 SF3B1O75533 1304 aaKnown RBP eCLIP12.61□□□□□ -0.39
CDRT1-202ENST00000354433 A0A087X0B3 334 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 TEX28O15482 410 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 SLC26A4O43511 780 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 YARSP54577 528 aaKnown RBP12.6□□□□□ -0.39
CDRT1-202ENST00000354433 USP41Q3LFD5 358 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 TAS1R1Q7RTX1 841 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 LUZP1Q86V48 1076 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 PDILTQ8N807 584 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 TDRD5Q8NAT2 981 aaKnown RBP12.6□□□□□ -0.39
CDRT1-202ENST00000354433 SLC22A17Q8WUG5 538 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 SMARCE1Q969G3 411 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 DHX58Q96C10 678 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 FAM122AQ96E09 287 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 PAAF1Q9BRP4 392 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 TCHPQ9BT92 498 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 MRPL4Q9BYD3 311 aaKnown RBP12.6□□□□□ -0.39
CDRT1-202ENST00000354433 CUEDC2Q9H467 287 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 DACH1Q9UI36 760 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 PCDHA5Q9Y5H7 936 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 SFI1A8K8P3 1242 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 SMTNL1A8MU46 457 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 BECN2A8MW95 431 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 C2CD4DB7Z1M9 353 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 PTGESO14684 152 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 IKBKBO14920 756 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 SLC16A4O15374 487 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 KIF4AO95239 1232 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 ADCY5O95622 1261 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 MYL1P05976 194 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 UBA7P41226 1012 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 OSTNP61366 133 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 DSG1Q02413 1049 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 CACNB1Q02641 598 aaPredicted RBP12.6□□□□□ -0.39
CDRT1-202ENST00000354433 STRN3Q13033 797 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 DPCR1Q3MIW9 517 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 SARM1Q6SZW1 724 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 CCDC149Q6ZUS6 474 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 HFE2Q6ZVN8 426 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 CEP57Q86XR8 500 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 DHX40Q8IX18 779 aaKnown RBP12.6□□□□□ -0.39
CDRT1-202ENST00000354433 RNF168Q8IYW5 571 aaPredicted RBP12.6□□□□□ -0.39
CDRT1-202ENST00000354433 DAW1Q8N136 415 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 RIN2Q8WYP3 895 aaPredicted RBP12.6□□□□□ -0.39
CDRT1-202ENST00000354433 EDAQ92838 391 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 CALML4Q96GE6 196 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 PAGE5Q96GU1 130 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 PNMA5Q96PV4 448 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 GSDMAQ96QA5 445 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 TIPINQ9BVW5 301 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 CCDC94Q9BW85 323 aaPredicted RBP12.6□□□□□ -0.39
CDRT1-202ENST00000354433 GPR62Q9BZJ7 368 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.6□□□□□ -0.39
CDRT1-202ENST00000354433 ANKFY1Q9P2R3 1169 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 DPP7Q9UHL4 492 aa12.6□□□□□ -0.39
CDRT1-202ENST00000354433 LILRB3O75022 631 aa12.59□□□□□ -0.39
CDRT1-202ENST00000354433 PLA2G4BP0C869 781 aa12.59□□□□□ -0.39
CDRT1-202ENST00000354433 GUCY2CP25092 1073 aa12.59□□□□□ -0.39
CDRT1-202ENST00000354433 SMTNP53814 917 aa12.59□□□□□ -0.39
CDRT1-202ENST00000354433 ZXDAP98168 799 aa12.59□□□□□ -0.39
CDRT1-202ENST00000354433 CREMQ03060 361 aa12.59□□□□□ -0.39
CDRT1-202ENST00000354433 MORC3Q14149 939 aa12.59□□□□□ -0.39
CDRT1-202ENST00000354433 DHX8Q14562 1220 aaKnown RBP12.59□□□□□ -0.39
CDRT1-202ENST00000354433 PTPN21Q16825 1174 aa12.59□□□□□ -0.39
CDRT1-202ENST00000354433 C1orf186Q6ZWK4 172 aa12.59□□□□□ -0.39
CDRT1-202ENST00000354433 PALB2Q86YC2 1186 aa12.59□□□□□ -0.39
CDRT1-202ENST00000354433 CEP120Q8N960 986 aa12.59□□□□□ -0.39
CDRT1-202ENST00000354433 SYT2Q8N9I0 419 aaPredicted RBP12.59□□□□□ -0.39
CDRT1-202ENST00000354433 MLKLQ8NB16 471 aa12.59□□□□□ -0.39
CDRT1-202ENST00000354433 ERCC4Q92889 916 aaPredicted RBP12.59□□□□□ -0.39
CDRT1-202ENST00000354433 TARS2Q9BW92 718 aaKnown RBP12.59□□□□□ -0.39
CDRT1-202ENST00000354433 CDT1Q9H211 546 aa12.59□□□□□ -0.39
CDRT1-202ENST00000354433 C17orf75Q9HAS0 396 aa12.59□□□□□ -0.39
CDRT1-202ENST00000354433 TOPORSQ9NS56 1045 aaPredicted RBP12.59□□□□□ -0.39
CDRT1-202ENST00000354433 ARHGAP28Q9P2N2 729 aa12.59□□□□□ -0.39
CDRT1-202ENST00000354433 TNFSF13BQ9Y275 285 aa12.59□□□□□ -0.39
CDRT1-202ENST00000354433 KRT18P05783 430 aaKnown RBP12.58□□□□□ -0.4
CDRT1-202ENST00000354433 RPL17P18621 184 aaKnown RBP12.58□□□□□ -0.4
CDRT1-202ENST00000354433 STAT6P42226 847 aa12.58□□□□□ -0.4
CDRT1-202ENST00000354433 MATR3P43243 847 aaKnown RBP eCLIP12.58□□□□□ -0.4
CDRT1-202ENST00000354433 TPM4P67936 248 aa12.58□□□□□ -0.4
CDRT1-202ENST00000354433 DPYDQ12882 1025 aa12.58□□□□□ -0.4
CDRT1-202ENST00000354433 MAPK7Q13164 816 aa12.58□□□□□ -0.4
CDRT1-202ENST00000354433 RTP2Q5QGT7 225 aa12.58□□□□□ -0.4
CDRT1-202ENST00000354433 HYIQ5T013 277 aa12.58□□□□□ -0.4
CDRT1-202ENST00000354433 FAM171A1Q5VUB5 890 aa12.58□□□□□ -0.4
CDRT1-202ENST00000354433 KIAA0319Q5VV43 1072 aa12.58□□□□□ -0.4
CDRT1-202ENST00000354433 RRAGBQ5VZM2 374 aa12.58□□□□□ -0.4
CDRT1-202ENST00000354433 TRIM67Q6ZTA4 783 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms