RNA–Protein interactions for RNA: ENST00000354361.3

SYF2-202, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 2 BASIC

Gene SYF2, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-202ENST00000354361 TOMM22Q9NS69 142 aa4.81□□□□□ -1.64
SYF2-202ENST00000354361 ATP8A2Q9NTI2 1148 aa4.81□□□□□ -1.64
SYF2-202ENST00000354361 RBM28Q9NW13 759 aaKnown RBP4.81□□□□□ -1.64
SYF2-202ENST00000354361 RAI14Q9P0K7 980 aa4.81□□□□□ -1.64
SYF2-202ENST00000354361 TPCN1Q9ULQ1 816 aa4.81□□□□□ -1.64
SYF2-202ENST00000354361 COL16A1Q07092 1604 aaPredicted RBP4.81□□□□□ -1.64
SYF2-202ENST00000354361 CICQ96RK0 1608 aaPredicted RBP4.8□□□□□ -1.64
SYF2-202ENST00000354361 ZNF532Q9HCE3 1301 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 GOLGA6L19H0YKK7 550 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 IFIT3O14879 490 aaKnown RBP4.8□□□□□ -1.64
SYF2-202ENST00000354361 PRODHO43272 600 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 ZBTB43O43298 467 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 NARSO43776 548 aaKnown RBP4.8□□□□□ -1.64
SYF2-202ENST00000354361 DLX3O60479 287 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 BBOX1O75936 387 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 PTMAP06454 111 aaKnown RBP4.8□□□□□ -1.64
SYF2-202ENST00000354361 GNAT1P11488 350 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 FAHP16930 419 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 TGM1P22735 817 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 HIBADHP31937 336 aaKnown RBP4.8□□□□□ -1.64
SYF2-202ENST00000354361 IARSP41252 1262 aaKnown RBP4.8□□□□□ -1.64
SYF2-202ENST00000354361 MCAMP43121 646 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 EVCP57679 992 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 INHBEP58166 350 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 DGCR2P98153 550 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 EXOSC10Q01780 885 aaKnown RBP4.8□□□□□ -1.64
SYF2-202ENST00000354361 ARID5AQ03989 594 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 CHRNDQ07001 517 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 SSRP1Q08945 709 aaKnown RBP4.8□□□□□ -1.64
SYF2-202ENST00000354361 TUSC3Q13454 348 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 TOB2Q14106 344 aaPredicted RBP4.8□□□□□ -1.64
SYF2-202ENST00000354361 HSP90AA2PQ14568 343 aaPredicted RBP4.8□□□□□ -1.64
SYF2-202ENST00000354361 USP10Q14694 798 aaKnown RBP4.8□□□□□ -1.64
SYF2-202ENST00000354361 WTAPQ15007 396 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 ZNF568Q3ZCX4 644 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 AGBL4Q5VU57 503 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 CD276Q5ZPR3 534 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 ZNF772Q68DY9 489 aaPredicted RBP4.8□□□□□ -1.64
SYF2-202ENST00000354361 KCNT2Q6UVM3 1135 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 OTOP3Q7RTS5 596 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 IFNL3Q8IZI9 196 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 MAGEB6Q8N7X4 407 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 TBC1D22AQ8WUA7 517 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 OSBP2Q969R2 916 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 C8orf76Q96K31 380 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 TNMDQ9H2S6 317 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 ABCF2Q9UG63 623 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 MTMR6Q9Y217 621 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 SLC4A4Q9Y6R1 1079 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 ITGB4P16144 1822 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 SHANK3Q9BYB0 1731 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 ATRNO75882 1429 aa4.8□□□□□ -1.64
SYF2-202ENST00000354361 TUBGCP6Q96RT7 1819 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 WNK3Q9BYP7 1800 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 UBN2Q6ZU65 1347 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 ANKRD36CQ5JPF3 1778 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 KLF18A0A0U1RQI7 1052 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 PTPDC1A2A3K4 754 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 BLACEA4D250 179 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 GOLGA8BA8MQT2 603 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 H0Y858 1186 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 FIBPO43427 364 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 KINO60870 393 aaKnown RBP4.79□□□□□ -1.64
SYF2-202ENST00000354361 YEATS4O95619 227 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 BMP15O95972 392 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 XRCC6P12956 609 aaKnown RBP eCLIP4.79□□□□□ -1.64
SYF2-202ENST00000354361 PDE6AP16499 860 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 ACO1P21399 889 aaKnown RBP4.79□□□□□ -1.64
SYF2-202ENST00000354361 GRK2P25098 689 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 PDIA3P30101 505 aaKnown RBP4.79□□□□□ -1.64
SYF2-202ENST00000354361 ALDH1B1P30837 517 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 DNAJA1P31689 397 aaKnown RBP4.79□□□□□ -1.64
SYF2-202ENST00000354361 KIF5BP33176 963 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 MCM7P33993 719 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 GRK3P35626 688 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 GNAQP50148 359 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 RAC3P60763 192 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 PFKPQ01813 784 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 SPIRE1Q08AE8 756 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 GRAPQ13588 217 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 LSM12Q3MHD2 195 aaKnown RBP4.79□□□□□ -1.64
SYF2-202ENST00000354361 AKNAD1Q5T1N1 836 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 CCDC129Q6ZRS4 1044 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 CATIPQ7Z7H3 387 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 DZIP1Q86YF9 867 aaKnown RBP4.79□□□□□ -1.64
SYF2-202ENST00000354361 FAM177A1Q8N128 213 aaPredicted RBP4.79□□□□□ -1.64
SYF2-202ENST00000354361 AMER2Q8N7J2 671 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 CELF2-AS1Q8N7Q2 184 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 VGLL2Q8N8G2 317 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 CNBD1Q8NA66 436 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 GRAPLQ8TC17 118 aaPredicted RBP4.79□□□□□ -1.64
SYF2-202ENST00000354361 STAG1Q8WVM7 1258 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 EDC3Q96F86 508 aaKnown RBP4.79□□□□□ -1.64
SYF2-202ENST00000354361 STRBPQ96SI9 672 aaKnown RBP4.79□□□□□ -1.64
SYF2-202ENST00000354361 SEC62Q99442 399 aaKnown RBP4.79□□□□□ -1.64
SYF2-202ENST00000354361 EYA3Q99504 573 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 BRIP1Q9BX63 1249 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 TRIM8Q9BZR9 551 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 NUP62CLQ9H1M0 184 aa4.79□□□□□ -1.64
SYF2-202ENST00000354361 IKZF4Q9H2S9 585 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms