RNA–Protein interactions for RNA: ENST00000354336.7

CRKL-201, Transcript of CRK like proto-oncogene, adaptor protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRKL, Length 5,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRKL-201ENST00000354336 EIF3DO15371 548 aaKnown RBP eCLIP18.82■□□□□ 0.6
CRKL-201ENST00000354336 RAD51CO43502 376 aa18.82■□□□□ 0.6
CRKL-201ENST00000354336 TMCC1O94876 653 aa18.82■□□□□ 0.6
CRKL-201ENST00000354336 ELMSAN1Q6PJG2 1045 aa18.82■□□□□ 0.6
CRKL-201ENST00000354336 FOXP3Q9BZS1 431 aa18.82■□□□□ 0.6
CRKL-201ENST00000354336 USP15Q9Y4E8 981 aaPredicted RBP18.82■□□□□ 0.6
CRKL-201ENST00000354336 ATP9BO43861 1147 aa18.82■□□□□ 0.6
CRKL-201ENST00000354336 SLC9A1P19634 815 aa18.82■□□□□ 0.6
CRKL-201ENST00000354336 MXD4Q14582 209 aaPredicted RBP18.82■□□□□ 0.6
CRKL-201ENST00000354336 SMAD1Q15797 465 aaKnown RBP18.82■□□□□ 0.6
CRKL-201ENST00000354336 JAMLQ86YT9 394 aa18.82■□□□□ 0.6
CRKL-201ENST00000354336 ARL8AQ96BM9 186 aa18.82■□□□□ 0.6
CRKL-201ENST00000354336 XPO6Q96QU8 1125 aaKnown RBP18.82■□□□□ 0.6
CRKL-201ENST00000354336 TMEM117Q9H0C3 514 aa18.82■□□□□ 0.6
CRKL-201ENST00000354336 EML4Q9HC35 981 aaKnown RBP18.82■□□□□ 0.6
CRKL-201ENST00000354336 SENP2Q9HC62 589 aa18.82■□□□□ 0.6
CRKL-201ENST00000354336 PSMC3IPQ9P2W1 217 aaPredicted RBP18.82■□□□□ 0.6
CRKL-201ENST00000354336 KCNQ2O43526 872 aa18.82■□□□□ 0.6
CRKL-201ENST00000354336 ESRRBO95718 433 aa18.82■□□□□ 0.6
CRKL-201ENST00000354336 RASA1P20936 1047 aa18.82■□□□□ 0.6
CRKL-201ENST00000354336 FOXD4Q12950 439 aaPredicted RBP18.82■□□□□ 0.6
CRKL-201ENST00000354336 PIGHQ14442 188 aaPredicted RBP18.82■□□□□ 0.6
CRKL-201ENST00000354336 BTBD8Q5XKL5 378 aa18.82■□□□□ 0.6
CRKL-201ENST00000354336 RNF135Q8IUD6 432 aa18.82■□□□□ 0.6
CRKL-201ENST00000354336 ARHGAP18Q8N392 663 aa18.82■□□□□ 0.6
CRKL-201ENST00000354336 SYN2Q92777 582 aaPredicted RBP18.82■□□□□ 0.6
CRKL-201ENST00000354336 PGBD4Q96DM1 585 aa18.82■□□□□ 0.6
CRKL-201ENST00000354336 CRAMP1Q96RY5 1269 aa18.82■□□□□ 0.6
CRKL-201ENST00000354336 EPAS1Q99814 870 aa18.82■□□□□ 0.6
CRKL-201ENST00000354336 GOLGA8RI6L899 631 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 PDHBP11177 359 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 FXR2P51116 673 aaKnown RBP eCLIP18.81■□□□□ 0.61e-10■■□□□ 13.6
CRKL-201ENST00000354336 MMGT1Q8N4V1 131 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 RBBP8NLQ8NC74 664 aaPredicted RBP18.81■□□□□ 0.6
CRKL-201ENST00000354336 ENGASEQ8NFI3 743 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 RMDN2Q96LZ7 410 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 EGFL8Q99944 293 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 NEU2Q9Y3R4 380 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 ACOT2P49753 483 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 MKNK1Q9BUB5 465 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 ARHGAP10A1A4S6 786 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 PPP1R3GB7ZBB8 358 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 AP3B1O00203 1094 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 HSD17B4P51659 736 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 SESN2P58004 480 aaPredicted RBP18.81■□□□□ 0.6
CRKL-201ENST00000354336 NCOA4Q13772 614 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 KCTD17Q8N5Z5 321 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 SETD1BQ9UPS6 1966 aaKnown RBP18.81■□□□□ 0.6
CRKL-201ENST00000354336 STRIP1Q5VSL9 837 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 LPAR1Q92633 364 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 TSSK1BQ9BXA7 367 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 SGSM1Q2NKQ1 1148 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 USP38Q8NB14 1042 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 ARHGEF26Q96DR7 871 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 MTBPQ96DY7 904 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 RANBP17Q9H2T7 1088 aaKnown RBP18.81■□□□□ 0.6
CRKL-201ENST00000354336 TAF6LQ9Y6J9 622 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 SLC4A7Q9Y6M7 1214 aa18.81■□□□□ 0.6
CRKL-201ENST00000354336 UBA6A0AVT1 1052 aaPredicted RBP18.8■□□□□ 0.6
CRKL-201ENST00000354336 DFFAO00273 331 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 PDGFRAP16234 1089 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 HMGCS2P54868 508 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 TPI1P60174 286 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 DYNC1I2Q13409 638 aaKnown RBP18.8■□□□□ 0.6
CRKL-201ENST00000354336 DDIASQ8IXT1 998 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 OTUD5Q96G74 571 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 C9orf72Q96LT7 481 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 ERGIC2Q96RQ1 377 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 MMTAG2Q9BU76 263 aaKnown RBP18.8■□□□□ 0.6
CRKL-201ENST00000354336 PLEKHA5Q9HAU0 1116 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 SMARCAL1Q9NZC9 954 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 AGAP1Q9UPQ3 857 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 POLR1AO95602 1720 aaPredicted RBP18.8■□□□□ 0.6
CRKL-201ENST00000354336 PTPRUQ92729 1446 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 RBP5P82980 135 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 KCNA1Q09470 495 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 CATSPER1Q8NEC5 780 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 ATXN7L3BQ96GX2 97 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 ASPSCR1Q9BZE9 553 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 ROPN1BQ9BZX4 212 aaPredicted RBP18.8■□□□□ 0.6
CRKL-201ENST00000354336 ROPN1Q9HAT0 212 aaPredicted RBP18.8■□□□□ 0.6
CRKL-201ENST00000354336 ZNF212Q9UDV6 495 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 DBR1Q9UK59 544 aaKnown RBP18.8■□□□□ 0.6
CRKL-201ENST00000354336 FAM47DPA6NHR8 397 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 PHF20L1A8MW92 1017 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 RFX5P48382 616 aaPredicted RBP18.8■□□□□ 0.6
CRKL-201ENST00000354336 ALDH18A1P54886 795 aaKnown RBP18.8■□□□□ 0.6
CRKL-201ENST00000354336 LBRQ14739 615 aaKnown RBP18.8■□□□□ 0.6
CRKL-201ENST00000354336 GRAMD4Q6IC98 578 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 TMEM143Q96AN5 459 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 ISCUQ9H1K1 167 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 IL25Q9H293 177 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 IRAK4Q9NWZ3 460 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 ZC3H7BQ9UGR2 993 aaKnown RBP18.8■□□□□ 0.6
CRKL-201ENST00000354336 GGT7Q9UJ14 662 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 HPS5Q9UPZ3 1129 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 SULT1E1P49888 294 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 SNRPFP62306 86 aaKnown RBP18.8■□□□□ 0.6
CRKL-201ENST00000354336 MTMR2Q13614 643 aa18.8■□□□□ 0.6
CRKL-201ENST00000354336 C16orf87Q6PH81 154 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms