RNA–Protein interactions for RNA: ENST00000353546.7

ARFGAP1-201, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARFGAP1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-201ENST00000353546 SPIRE2Q8WWL2 714 aa17.95■□□□□ 0.46
ARFGAP1-201ENST00000353546 SPOCK2Q92563 424 aa17.95■□□□□ 0.46
ARFGAP1-201ENST00000353546 TSPAN18Q96SJ8 248 aa17.95■□□□□ 0.46
ARFGAP1-201ENST00000353546 ARHGEF38Q9NXL2 777 aa17.95■□□□□ 0.46
ARFGAP1-201ENST00000353546 CLIC5Q9NZA1 410 aa17.95■□□□□ 0.46
ARFGAP1-201ENST00000353546 TTLL1O95922 423 aa17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 BRAFP15056 766 aa17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 HOXD13P35453 343 aa17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 GRIA2P42262 883 aa17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 RPL21P46778 160 aaKnown RBP17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 PHEXP78562 749 aa17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 SULT2A1Q06520 285 aa17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 MAP7Q14244 749 aa17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 KNOP1Q1ED39 458 aaKnown RBP17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 CROCCP2Q86T23 111 aa17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 PALB2Q86YC2 1186 aa17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 SCUBE1Q8IWY4 988 aa17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 ZNF653Q96CK0 615 aa17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 MAGEB18Q96M61 343 aa17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 TLE6Q9H808 572 aa17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 RPL26L1Q9UNX3 145 aaKnown RBP17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 DDX3XO00571 662 aaKnown RBP eCLIP17.94■□□□□ 0.461e-9■■■■□ 23.4
ARFGAP1-201ENST00000353546 TRAFD1O14545 582 aaPredicted RBP17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 ZBTB5O15062 677 aa17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 AKAP3O75969 853 aa17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 ALOX15P16050 662 aaPredicted RBP17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 PTPN4P29074 926 aa17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 TRAPPC3LQ5T215 181 aa17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 NT5DC3Q86UY8 548 aa17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 SFR1Q86XK3 245 aa17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 U2AF1L4Q8WU68 220 aaKnown RBP17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 BRD8Q9H0E9 1235 aa17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 DDX43Q9NXZ2 648 aaKnown RBP17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 TRAF3IP3Q9Y228 551 aa17.94■□□□□ 0.46
ARFGAP1-201ENST00000353546 ATAD5Q96QE3 1844 aa17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 MAPK13O15264 365 aa17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 PABPC4LP0CB38 370 aaKnown RBP17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 PRKCIP41743 596 aa17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 EPHA7Q15375 998 aa17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 DCAF12L1Q5VU92 463 aa17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 PRR5LQ6MZQ0 368 aa17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 KSR1Q8IVT5 923 aa17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 SLC15A3Q8IY34 581 aa17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 ATF5Q9Y2D1 282 aaPredicted RBP17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 PCDHAC2Q9Y5I4 1007 aa17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 RNASEH1O60930 286 aaKnown RBP17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 RASSF2P50749 326 aa17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 GALK1P51570 392 aa17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 LMNB2Q03252 620 aa17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 TSHZ1Q6ZSZ6 1077 aa17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 SLFN11Q7Z7L1 901 aa17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 VPS36Q86VN1 386 aa17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 CCDC25Q86WR0 208 aa17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 CATSPER3Q86XQ3 398 aa17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 SLF2Q8IX21 1173 aa17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 SLCO1B3Q9NPD5 702 aa17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 SUCLA2Q9P2R7 463 aaPredicted RBP17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 NUMBLQ9Y6R0 609 aa17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 PITPNM2Q9BZ72 1349 aa17.93■□□□□ 0.46
ARFGAP1-201ENST00000353546 PLIN4Q96Q06 1357 aa17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 IGKV6D-41A0A0C4DH26 115 aa17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 BOLA2-SMG1P6H3BVE0 249 aa17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 CASP4P49662 377 aa17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 OXCT1P55809 520 aa17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 CDR2Q01850 454 aa17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 GABPAQ06546 454 aa17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 DOK7Q18PE1 504 aa17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 TAF1BQ53T94 588 aaPredicted RBP17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 HAUS1Q96CS2 278 aa17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 REEP2Q9BRK0 252 aa17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 GGA1Q9UJY5 639 aa17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 ACSL3O95573 720 aa17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 ADARP55265 1226 aaKnown RBP17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 DNAJC3Q13217 504 aa17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 PPP2R5CQ13362 524 aa17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 C15orf52Q6ZUT6 534 aaKnown RBP17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 GRAMD1AQ96CP6 724 aa17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 IKZF4Q9H2S9 585 aa17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 SIX2Q9NPC8 291 aa17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 GCNT4Q9P109 453 aa17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 STX18Q9P2W9 335 aaKnown RBP17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 DAGLAQ9Y4D2 1042 aa17.92■□□□□ 0.46
ARFGAP1-201ENST00000353546 IL1R1P14778 569 aa17.91■□□□□ 0.46
ARFGAP1-201ENST00000353546 MOGSQ13724 837 aa17.91■□□□□ 0.46
ARFGAP1-201ENST00000353546 SATL1Q86VE3 508 aa17.91■□□□□ 0.46
ARFGAP1-201ENST00000353546 MAP7D3Q8IWC1 876 aa17.91■□□□□ 0.46
ARFGAP1-201ENST00000353546 C18orf8Q96DM3 657 aa17.91■□□□□ 0.46
ARFGAP1-201ENST00000353546 HES6Q96HZ4 224 aa17.91■□□□□ 0.46
ARFGAP1-201ENST00000353546 OLFM3Q96PB7 478 aa17.91■□□□□ 0.46
ARFGAP1-201ENST00000353546 UNC45AQ9H3U1 944 aa17.91■□□□□ 0.46
ARFGAP1-201ENST00000353546 USP40Q9NVE5 1235 aa17.91■□□□□ 0.46
ARFGAP1-201ENST00000353546 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.91■□□□□ 0.46
ARFGAP1-201ENST00000353546 NENFQ9UMX5 172 aa17.91■□□□□ 0.46
ARFGAP1-201ENST00000353546 TMEM98Q9Y2Y6 226 aa17.91■□□□□ 0.46
ARFGAP1-201ENST00000353546 GAKO14976 1311 aa17.91■□□□□ 0.46
ARFGAP1-201ENST00000353546 NHSQ6T4R5 1651 aa17.91■□□□□ 0.46
ARFGAP1-201ENST00000353546 CLIC2O15247 247 aa17.91■□□□□ 0.46
ARFGAP1-201ENST00000353546 CALUO43852 315 aaPredicted RBP17.91■□□□□ 0.46
ARFGAP1-201ENST00000353546 JAM2P57087 298 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms