RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 MAML3Q96JK9 1138 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 C9orf72Q96LT7 481 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 CEP63Q96MT8 703 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 PNMA5Q96PV4 448 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 PANX3Q96QZ0 392 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 ASIC3Q9UHC3 531 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 COG5Q9UP83 839 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.05□□□□□ -0.16
IFT88-202ENST00000351808 ATMINO43313 823 aaPredicted RBP14.05□□□□□ -0.16
IFT88-202ENST00000351808 ZBED4O75132 1171 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 TFAP2AP05549 437 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 TROVE2P10155 538 aaKnown RBP eCLIP14.05□□□□□ -0.16
IFT88-202ENST00000351808 UQCRBP14927 111 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 HSPA6P17066 643 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 VCLP18206 1134 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 SMARCA1P28370 1054 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 PIK3CAP42336 1068 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 ASPHQ12797 758 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 ZFP28Q8NHY6 868 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 DEPTORQ8TB45 409 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 TUBB6Q9BUF5 446 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 DDX25Q9UHL0 483 aaKnown RBP14.05□□□□□ -0.16
IFT88-202ENST00000351808 AMOTL2Q9Y2J4 779 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 SMIM18P0DKX4 95 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 RARBP10826 455 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 CA4P22748 312 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 GEMIN4P57678 1058 aaKnown RBP14.05□□□□□ -0.16
IFT88-202ENST00000351808 PDK3Q15120 406 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 MAPK6Q16659 721 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 NADK2Q4G0N4 442 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 LPCAT4Q643R3 524 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 RHBDF2Q6PJF5 856 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 TTC7BQ86TV6 843 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 SYNE4Q8N205 404 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 FBXO27Q8NI29 283 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 DQX1Q8TE96 717 aaKnown RBP14.05□□□□□ -0.16
IFT88-202ENST00000351808 DHRS1Q96LJ7 313 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 MPHOSPH6Q99547 160 aaKnown RBP14.05□□□□□ -0.16
IFT88-202ENST00000351808 NACA2Q9H009 215 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 TRABDQ9H4I3 376 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 HDAC9Q9UKV0 1011 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 TMED5Q9Y3A6 229 aa14.05□□□□□ -0.16
IFT88-202ENST00000351808 F8W8V4 182 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 SNAP23O00161 211 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 ADCY3O60266 1144 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 ADAMTS2O95450 1211 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 UQCRFS1P1P0C7P4 283 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 TMEM253P0C7T8 217 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 PIM1P11309 404 aaPredicted RBP14.04□□□□□ -0.16
IFT88-202ENST00000351808 RPL5P46777 297 aaKnown RBP14.04□□□□□ -0.16
IFT88-202ENST00000351808 AQP4P55087 323 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 PPIDQ08752 370 aaKnown RBP14.04□□□□□ -0.16
IFT88-202ENST00000351808 MSLNQ13421 630 aaPredicted RBP14.04□□□□□ -0.16
IFT88-202ENST00000351808 CLUL1Q15846 466 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 CCDC62Q6P9F0 684 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 TRABD2AQ86V40 505 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 NUP93Q8N1F7 819 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 THAP2Q9H0W7 228 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 TBCCD1Q9NVR7 557 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 UBAP1Q9NZ09 502 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 BCORQ6W2J9 1755 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 KANSL1LA0AUZ9 987 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 B2RBV5 119 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 P4HA2O15460 535 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 RAP1GDS1P52306 607 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 CHN2P52757 468 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 ITGA8P53708 1063 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 COASYQ13057 564 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 RASGRF1Q13972 1273 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 MMEL1Q495T6 779 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 KCNK18Q7Z418 384 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 ARHGAP24Q8N264 748 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 METTL25Q8N6Q8 603 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 TAS2R14Q9NYV8 317 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 ARMCX1Q9P291 453 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 ANKFY1Q9P2R3 1169 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 ZNF148Q9UQR1 794 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 NCANO14594 1321 aa14.04□□□□□ -0.16
IFT88-202ENST00000351808 C2orf71A6NGG8 1288 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.03□□□□□ -0.16
IFT88-202ENST00000351808 SERPINB7O75635 380 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 CLPTM1O96005 669 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 ALDH2P05091 517 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 MARSP56192 900 aaKnown RBP14.03□□□□□ -0.16
IFT88-202ENST00000351808 KRT17Q04695 432 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 BTKQ06187 659 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 FAM26FQ5R3K3 315 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 SEL1L2Q5TEA6 688 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 CCDC77Q9BR77 488 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 MKNK1Q9BUB5 465 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 SEPT11Q9NVA2 429 aaKnown RBP14.03□□□□□ -0.16
IFT88-202ENST00000351808 EURLQ9NYK6 297 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 TELO2Q9Y4R8 837 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 ZMYM2Q9UBW7 1377 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 DKC1O60832 514 aaKnown RBP eCLIP14.03□□□□□ -0.16
IFT88-202ENST00000351808 NAT1P18440 290 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 NFKBIAP25963 317 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 PKN2Q16513 984 aaKnown RBP14.03□□□□□ -0.16
IFT88-202ENST00000351808 KCTD21Q4G0X4 260 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 FAM47AQ5JRC9 791 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms