RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 TRIM50Q86XT4 487 aa17.9■□□□□ 0.46
SAMM50-201ENST00000350028 RNF149Q8NC42 400 aa17.9■□□□□ 0.46
SAMM50-201ENST00000350028 ZNF564Q8TBZ8 553 aaPredicted RBP17.9■□□□□ 0.46
SAMM50-201ENST00000350028 CASKIN2Q8WXE0 1202 aa17.9■□□□□ 0.46
SAMM50-201ENST00000350028 TCHPQ9BT92 498 aa17.9■□□□□ 0.46
SAMM50-201ENST00000350028 EFCC1Q9HA90 598 aa17.9■□□□□ 0.46
SAMM50-201ENST00000350028 BHMG1C9JSJ3 638 aaPredicted RBP17.89■□□□□ 0.46
SAMM50-201ENST00000350028 FGGP02679 453 aa17.89■□□□□ 0.46
SAMM50-201ENST00000350028 CETPP11597 493 aa17.89■□□□□ 0.46
SAMM50-201ENST00000350028 CUL1Q13616 776 aa17.89■□□□□ 0.46
SAMM50-201ENST00000350028 MESDQ14696 234 aa17.89■□□□□ 0.46
SAMM50-201ENST00000350028 DCAF12L1Q5VU92 463 aa17.89■□□□□ 0.46
SAMM50-201ENST00000350028 ALS2CLQ60I27 953 aa17.89■□□□□ 0.46
SAMM50-201ENST00000350028 SMYD5Q6GMV2 418 aa17.89■□□□□ 0.46
SAMM50-201ENST00000350028 ZNF771Q7L3S4 317 aaPredicted RBP17.89■□□□□ 0.46
SAMM50-201ENST00000350028 WDR49Q8IV35 697 aa17.89■□□□□ 0.46
SAMM50-201ENST00000350028 WHAMMQ8TF30 809 aa17.89■□□□□ 0.46
SAMM50-201ENST00000350028 IFT81Q8WYA0 676 aa17.89■□□□□ 0.46
SAMM50-201ENST00000350028 COPS5Q92905 334 aa17.89■□□□□ 0.46
SAMM50-201ENST00000350028 ELMO3Q96BJ8 720 aa17.89■□□□□ 0.46
SAMM50-201ENST00000350028 TRIM11Q96F44 468 aa17.89■□□□□ 0.46
SAMM50-201ENST00000350028 FAM84AQ96KN4 292 aa17.89■□□□□ 0.46
SAMM50-201ENST00000350028 RNPC3Q96LT9 517 aaKnown RBP17.89■□□□□ 0.46
SAMM50-201ENST00000350028 NUP85Q9BW27 656 aa17.89■□□□□ 0.46
SAMM50-201ENST00000350028 TRPC6Q9Y210 931 aa17.89■□□□□ 0.46
SAMM50-201ENST00000350028 MCM3APO60318 1980 aa17.89■□□□□ 0.45
SAMM50-201ENST00000350028 GOLGA6BA6NDN3 693 aa17.89■□□□□ 0.45
SAMM50-201ENST00000350028 SYF2O95926 243 aaKnown RBP17.89■□□□□ 0.45
SAMM50-201ENST00000350028 CLTAP09496 248 aa17.89■□□□□ 0.45
SAMM50-201ENST00000350028 CYP2C8P10632 490 aa17.89■□□□□ 0.45
SAMM50-201ENST00000350028 HARSP12081 509 aaKnown RBP17.89■□□□□ 0.45
SAMM50-201ENST00000350028 UNGP13051 313 aaPredicted RBP17.89■□□□□ 0.45
SAMM50-201ENST00000350028 HSPA6P17066 643 aa17.89■□□□□ 0.45
SAMM50-201ENST00000350028 ACO1P21399 889 aaKnown RBP17.89■□□□□ 0.45
SAMM50-201ENST00000350028 COMTP21964 271 aa17.89■□□□□ 0.45
SAMM50-201ENST00000350028 MCL1Q07820 350 aa17.89■□□□□ 0.45
SAMM50-201ENST00000350028 LAMC2Q13753 1193 aa17.89■□□□□ 0.45
SAMM50-201ENST00000350028 ZNF792Q3KQV3 632 aa17.89■□□□□ 0.45
SAMM50-201ENST00000350028 ZNF484Q5JVG2 852 aa17.89■□□□□ 0.45
SAMM50-201ENST00000350028 MAP1SQ66K74 1059 aaPredicted RBP17.89■□□□□ 0.45
SAMM50-201ENST00000350028 TRIM72Q6ZMU5 477 aa17.89■□□□□ 0.45
SAMM50-201ENST00000350028 ARMCX2Q7L311 632 aa17.89■□□□□ 0.45
SAMM50-201ENST00000350028 LRRC71Q8N4P6 559 aa17.89■□□□□ 0.45
SAMM50-201ENST00000350028 EXOC4Q96A65 974 aa17.89■□□□□ 0.45
SAMM50-201ENST00000350028 ZSWIM1Q9BR11 485 aa17.89■□□□□ 0.45
SAMM50-201ENST00000350028 DDX47Q9H0S4 455 aaKnown RBP17.89■□□□□ 0.45
SAMM50-201ENST00000350028 AVENQ9NQS1 362 aaPredicted RBP17.89■□□□□ 0.45
SAMM50-201ENST00000350028 PDGFCQ9NRA1 345 aa17.89■□□□□ 0.45
SAMM50-201ENST00000350028 VPS18Q9P253 973 aa17.89■□□□□ 0.45
SAMM50-201ENST00000350028 CNOT8Q9UFF9 292 aaKnown RBP17.89■□□□□ 0.45
SAMM50-201ENST00000350028 NFU1Q9UMS0 254 aa17.89■□□□□ 0.45
SAMM50-201ENST00000350028 CNTN6Q9UQ52 1028 aa17.89■□□□□ 0.45
SAMM50-201ENST00000350028 FAN1Q9Y2M0 1017 aa17.89■□□□□ 0.45
SAMM50-201ENST00000350028 GOLGA6L10A0A0M3HER8 536 aa17.88■□□□□ 0.45
SAMM50-201ENST00000350028 TMEM110-MUSTN1A8MSY1 372 aa17.88■□□□□ 0.45
SAMM50-201ENST00000350028 FAM189A1O60320 539 aa17.88■□□□□ 0.45
SAMM50-201ENST00000350028 MYBL1P10243 752 aa17.88■□□□□ 0.45
SAMM50-201ENST00000350028 ITGA4P13612 1032 aa17.88■□□□□ 0.45
SAMM50-201ENST00000350028 CTNNA2P26232 953 aa17.88■□□□□ 0.45
SAMM50-201ENST00000350028 SPOPLQ6IQ16 392 aa17.88■□□□□ 0.45
SAMM50-201ENST00000350028 PPP1R2P3Q6NXS1 205 aa17.88■□□□□ 0.45
SAMM50-201ENST00000350028 ZBTB33Q86T24 672 aa17.88■□□□□ 0.45
SAMM50-201ENST00000350028 MREGQ8N565 214 aa17.88■□□□□ 0.45
SAMM50-201ENST00000350028 OR5B17Q8NGF7 314 aa17.88■□□□□ 0.45
SAMM50-201ENST00000350028 ALG3Q92685 438 aa17.88■□□□□ 0.45
SAMM50-201ENST00000350028 APOBEC3GQ9HC16 384 aaKnown RBP17.88■□□□□ 0.45
SAMM50-201ENST00000350028 VTA1Q9NP79 307 aa17.88■□□□□ 0.45
SAMM50-201ENST00000350028 PSD3Q9NYI0 1048 aa17.88■□□□□ 0.45
SAMM50-201ENST00000350028 ERAP1Q9NZ08 941 aa17.88■□□□□ 0.45
SAMM50-201ENST00000350028 ADAM21Q9UKJ8 722 aa17.88■□□□□ 0.45
SAMM50-201ENST00000350028 PCDHB4Q9Y5E5 795 aa17.88■□□□□ 0.45
SAMM50-201ENST00000350028 RBM47A0AV96 593 aaKnown RBP17.87■□□□□ 0.45
SAMM50-201ENST00000350028 FAM170AA1A519 330 aa17.87■□□□□ 0.45
SAMM50-201ENST00000350028 CCDC66A2RUB6 948 aa17.87■□□□□ 0.45
SAMM50-201ENST00000350028 ZSCAN5CA6NGD5 496 aaPredicted RBP17.87■□□□□ 0.45
SAMM50-201ENST00000350028 TTLL13PA6NNM8 815 aa17.87■□□□□ 0.45
SAMM50-201ENST00000350028 ACKR2O00590 384 aa17.87■□□□□ 0.45
SAMM50-201ENST00000350028 ABLIM1O14639 778 aa17.87■□□□□ 0.45
SAMM50-201ENST00000350028 CYP1A1P04798 512 aaPredicted RBP17.87■□□□□ 0.45
SAMM50-201ENST00000350028 NOP14P78316 857 aaKnown RBP17.87■□□□□ 0.45
SAMM50-201ENST00000350028 NCOA4Q13772 614 aa17.87■□□□□ 0.45
SAMM50-201ENST00000350028 EFCAB12Q6NXP0 572 aa17.87■□□□□ 0.45
SAMM50-201ENST00000350028 TSHZ1Q6ZSZ6 1077 aa17.87■□□□□ 0.45
SAMM50-201ENST00000350028 RHPN2Q8IUC4 686 aa17.87■□□□□ 0.45
SAMM50-201ENST00000350028 MCOLN2Q8IZK6 566 aa17.87■□□□□ 0.45
SAMM50-201ENST00000350028 ABRAQ8N0Z2 381 aa17.87■□□□□ 0.45
SAMM50-201ENST00000350028 CD101Q93033 1021 aa17.87■□□□□ 0.45
SAMM50-201ENST00000350028 IMPG2Q9BZV3 1241 aa17.87■□□□□ 0.45
SAMM50-201ENST00000350028 FZD8Q9H461 694 aa17.87■□□□□ 0.45
SAMM50-201ENST00000350028 CPSF3Q9UKF6 684 aaKnown RBP17.87■□□□□ 0.45
SAMM50-201ENST00000350028 ESYT3A0FGR9 886 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 AGPSO00116 658 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 PDHXO00330 501 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 ATMINO43313 823 aaPredicted RBP17.86■□□□□ 0.45
SAMM50-201ENST00000350028 STRNO43815 780 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 HSF2BPO75031 334 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 GH1P01241 217 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 PROZP22891 400 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 GGCXP38435 758 aa17.86■□□□□ 0.45
SAMM50-201ENST00000350028 TNFSF9P41273 254 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms