RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 GLI3P10071 1580 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 NOL4O94818 638 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 GAS8O95995 478 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 CETPP11597 493 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 AQP4P55087 323 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 PDE1CQ14123 709 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-203ENST00000349748 RRP1BQ14684 758 aaKnown RBP11.3□□□□□ -0.6
CAPN3-203ENST00000349748 CCDC153Q494R4 210 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 LPCAT4Q643R3 524 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 AADACL2Q6P093 401 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 UNC13DQ70J99 1090 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 PRUNE1Q86TP1 453 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 PPP4R1Q8TF05 950 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 CLPTM1LQ96KA5 538 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 SPATA17Q96L03 361 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 RBM38Q9H0Z9 239 aaKnown RBP11.3□□□□□ -0.6
CAPN3-203ENST00000349748 TMEM60Q9H2L4 133 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 DISC1Q9NRI5 854 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 TAS2R1Q9NYW7 299 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 PRELID1Q9Y255 219 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 GPC6Q9Y625 555 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-203ENST00000349748 MYH4Q9Y623 1939 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 PKD1L3Q7Z443 1732 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 LOC102724428A0A0B4J2F2 783 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 FUOMA2VDF0 154 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 STARD3NLO95772 234 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 CLPTM1O96005 669 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 VCLP18206 1134 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 RCVRNP35243 200 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 RPL5P46777 297 aaKnown RBP11.3□□□□□ -0.6
CAPN3-203ENST00000349748 EIF2B2P49770 351 aaKnown RBP11.3□□□□□ -0.6
CAPN3-203ENST00000349748 ENTPD1P49961 510 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 SIK1P57059 783 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 IL9RQ01113 521 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 MSLNQ13421 630 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-203ENST00000349748 DCAF12L1Q5VU92 463 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 CCT7Q99832 543 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 CDC42EP4Q9H3Q1 356 aaKnown RBP11.3□□□□□ -0.6
CAPN3-203ENST00000349748 MTRF1LQ9UGC7 380 aaKnown RBP11.3□□□□□ -0.6
CAPN3-203ENST00000349748 PCDHGB4Q9UN71 923 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 PCDHGB5Q9Y5G0 923 aa11.3□□□□□ -0.6
CAPN3-203ENST00000349748 C15orf38-AP3S2A0A0A6YYH1 394 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 EYA2O00167 538 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 BUD23O43709 281 aaKnown RBP11.29□□□□□ -0.6
CAPN3-203ENST00000349748 CBFA2T3O75081 653 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 HAUS5O94927 633 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 STAMBPO95630 424 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 RARGP13631 454 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 ENDOUP21128 410 aaKnown RBP11.29□□□□□ -0.6
CAPN3-203ENST00000349748 PGM1P36871 562 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 RHBDL3P58872 404 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 MAPK7Q13164 816 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 NCOA4Q13772 614 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 MAN2A1Q16706 1144 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 FAM209AQ5JX71 171 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 ARPINQ7Z6K5 226 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 PDSS2Q86YH6 399 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 SIX5Q8N196 739 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 PTCD3Q96EY7 689 aaKnown RBP11.29□□□□□ -0.6
CAPN3-203ENST00000349748 MAELQ96JY0 434 aaKnown RBP11.29□□□□□ -0.6
CAPN3-203ENST00000349748 LSM14BQ9BX40 385 aaKnown RBP11.29□□□□□ -0.6
CAPN3-203ENST00000349748 LRRC27Q9C0I9 530 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 GRID1Q9ULK0 1009 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 GIT1Q9Y2X7 761 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 COQ6Q9Y2Z9 468 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.29□□□□□ -0.6
CAPN3-203ENST00000349748 TJP1Q07157 1748 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 H3BSA7 217 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 ADAMTS3O15072 1205 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 DGKIO75912 1065 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 ZBED1O96006 694 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 TKTP29401 623 aaKnown RBP11.29□□□□□ -0.6
CAPN3-203ENST00000349748 TCF7P36402 384 aaPredicted RBP11.29□□□□□ -0.6
CAPN3-203ENST00000349748 IL15P40933 162 aaPredicted RBP11.29□□□□□ -0.6
CAPN3-203ENST00000349748 CHN2P52757 468 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 HIRAP54198 1017 aaPredicted RBP11.29□□□□□ -0.6
CAPN3-203ENST00000349748 OVGP1Q12889 678 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 SEPT7Q16181 437 aaKnown RBP11.29□□□□□ -0.6
CAPN3-203ENST00000349748 MMEL1Q495T6 779 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 FBXL19Q6PCT2 694 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 PIK3AP1Q6ZUJ8 805 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 RNF169Q8NCN4 708 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 ANKK1Q8NFD2 765 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 PLEKHO2Q8TD55 490 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 NEURL2Q9BR09 285 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 TRNAU1APQ9NX07 287 aaKnown RBP11.29□□□□□ -0.6
CAPN3-203ENST00000349748 CCPG1Q9ULG6 757 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 ZBTB1Q9Y2K1 713 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 PTPN22Q9Y2R2 807 aa11.29□□□□□ -0.6
CAPN3-203ENST00000349748 ADCY6O43306 1168 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 NOP14P78316 857 aaKnown RBP11.28□□□□□ -0.6
CAPN3-203ENST00000349748 PTK2Q05397 1052 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 ZNF394Q53GI3 561 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 SLC45A4Q5BKX6 768 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 DEPDC1Q5TB30 811 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 UGT2A3Q6UWM9 527 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 RIPOR1Q6ZS17 1223 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 NT5DC3Q86UY8 548 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 MORC4Q8TE76 937 aa11.28□□□□□ -0.6
CAPN3-203ENST00000349748 APPBP2Q92624 585 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms