RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 KLHDC10Q6PID8 442 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 PEX26Q7Z412 305 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 RFWD2Q8NHY2 731 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 NLRP7Q8WX94 980 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 KIAA1683Q9H0B3 1180 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 MAP3K15Q6ZN16 1313 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 O00370 1275 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 DAPK3O43293 454 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 GUCY1B2O75343 617 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 ZNF18P17022 549 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 NR4A1P22736 598 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 CUL1Q13616 776 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 COL19A1Q14993 1142 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 CHADLQ6NUI6 762 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 VPS37DQ86XT2 251 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 NOSTRINQ8IVI9 506 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 NATD1Q8N6N6 113 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 OXER1Q8TDS5 423 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 ZNF317Q96PQ6 595 aaPredicted RBP12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 CCDC77Q9BR77 488 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 MYLK2Q9H1R3 596 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 NHEJ1Q9H9Q4 299 aaPredicted RBP12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 ADD3Q9UEY8 706 aaKnown RBP12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 RABGEF1Q9UJ41 708 aa12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.93□□□□□ -0.34
CTNNB1-201ENST00000349496 SH3PXD2BA1X283 911 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 PSMG1O95456 288 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 PCCAP05165 728 aaPredicted RBP12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 RPL5P46777 297 aaKnown RBP12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 ENTPD1P49961 510 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 ASPHQ12797 758 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 PARP6Q2NL67 630 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 C10orf76Q5T2E6 689 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 EGFLAMQ63HQ2 1017 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 KRT40Q6A162 431 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 IYDQ6PHW0 289 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 ZBTB46Q86UZ6 589 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 SNX32Q86XE0 403 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 NUDCD3Q8IVD9 361 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 MREGQ8N565 214 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 THAP9Q9H5L6 903 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 CLK4Q9HAZ1 481 aaKnown RBP12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 PRKAG3Q9UGI9 489 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 CAPN6Q9Y6Q1 641 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 KCNK3O14649 394 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 NMT2O60551 498 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 TBX10O75333 385 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 FARP2O94887 1054 aaPredicted RBP12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 PDE8BO95263 885 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 ADD2P35612 726 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 RAP1GDS1P52306 607 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 COPB1P53618 953 aaKnown RBP12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 HERVK_113P62684 666 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 DYNLL1P63167 89 aaKnown RBP12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 PLS1Q14651 629 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 METTL16Q86W50 562 aaKnown RBP12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 AP1M1Q9BXS5 423 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 LRP2BPQ9P2M1 347 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 AFDNP55196 1824 aaKnown RBP12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 CCDC162PA2VCL2 907 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 TMEM114B3SHH9 223 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 FOXD2O60548 495 aaPredicted RBP12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 ICMTO60725 284 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 SPAG7O75391 227 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 P4HA1P13674 534 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 GM2AP17900 193 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 KCNMA1Q12791 1236 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 IGSF11Q5DX21 431 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 HEATR4Q86WZ0 1026 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 LSM14AQ8ND56 463 aaKnown RBP12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 TBCBQ99426 244 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 NAPBQ9H115 298 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 TFCP2L1Q9NZI6 479 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 GABBR1Q9UBS5 961 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 ZFP69BQ9UJL9 534 aa12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 NIP7Q9Y221 180 aaKnown RBP eCLIP12.92□□□□□ -0.34
CTNNB1-201ENST00000349496 JCADQ9P266 1359 aa12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 TNPO2O14787 897 aaKnown RBP12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 SEMA3DO95025 777 aa12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 AP2B1P63010 937 aa12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 PDAP1Q13442 181 aaKnown RBP12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 SPIDRQ14159 915 aa12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 GALNT7Q86SF2 657 aa12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 ADSSL1Q8N142 457 aa12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 IER2Q9BTL4 223 aa12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 GDF3Q9NR23 364 aa12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 KLHL41O60662 606 aa12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 EPS15P42566 896 aa12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 CASP5P51878 434 aa12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 IFI35P80217 286 aaPredicted RBP12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 BRSK1Q8TDC3 778 aa12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 FMO2Q99518 471 aa12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 LLPHQ9BRT6 129 aaKnown RBP12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 MKNK1Q9BUB5 465 aa12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 POLR3EQ9NVU0 708 aa12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 DBR1Q9UK59 544 aaKnown RBP12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 GPSM3Q9Y4H4 160 aa12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 SLC4A4Q9Y6R1 1079 aa12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 TRPM3Q9HCF6 1732 aaPredicted RBP12.91□□□□□ -0.34
CTNNB1-201ENST00000349496 COL5A2P05997 1499 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms