RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 CEP89Q96ST8 783 aa16.55■□□□□ 0.24
TNFSF13-202ENST00000349228 SPATA31C2B4DYI2 1134 aa16.54■□□□□ 0.24
TNFSF13-202ENST00000349228 RGS16O15492 202 aaPredicted RBP16.54■□□□□ 0.24
TNFSF13-202ENST00000349228 LDHAP00338 332 aaKnown RBP16.54■□□□□ 0.24
TNFSF13-202ENST00000349228 DLATP10515 647 aaKnown RBP16.54■□□□□ 0.24
TNFSF13-202ENST00000349228 TGFB2P61812 414 aa16.54■□□□□ 0.24
TNFSF13-202ENST00000349228 STRN3Q13033 797 aa16.54■□□□□ 0.24
TNFSF13-202ENST00000349228 PLCB4Q15147 1175 aa16.54■□□□□ 0.24
TNFSF13-202ENST00000349228 C6orf89Q6UWU4 347 aa16.54■□□□□ 0.24
TNFSF13-202ENST00000349228 ABHD15Q6UXT9 468 aa16.54■□□□□ 0.24
TNFSF13-202ENST00000349228 ZDHHC14Q8IZN3 488 aa16.54■□□□□ 0.24
TNFSF13-202ENST00000349228 RAPGEF5Q92565 580 aa16.54■□□□□ 0.24
TNFSF13-202ENST00000349228 VCPIP1Q96JH7 1222 aa16.54■□□□□ 0.24
TNFSF13-202ENST00000349228 FNBP1Q96RU3 617 aa16.54■□□□□ 0.24
TNFSF13-202ENST00000349228 FAM213AQ9BRX8 229 aa16.54■□□□□ 0.24
TNFSF13-202ENST00000349228 KIFC3Q9BVG8 833 aa16.54■□□□□ 0.24
TNFSF13-202ENST00000349228 ATMINO43313 823 aaPredicted RBP16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 CAND2O75155 1236 aa16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 PIGRP01833 764 aa16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 LIG4P49917 911 aa16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 EN1Q05925 392 aaPredicted RBP16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 SLC29A2Q14542 456 aa16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 ZACNQ401N2 412 aa16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 ERMARDQ5T6L9 678 aa16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 LIN9Q5TKA1 542 aa16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 SNRNP48Q6IEG0 339 aaKnown RBP16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 PLCD3Q8N3E9 789 aa16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 XPNPEP1Q9NQW7 623 aa16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 PICK1Q9NRD5 415 aa16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 TOPORSQ9NS56 1045 aaPredicted RBP16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 RIPK3Q9Y572 518 aa16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 MMP13P45452 471 aa16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 LIG3P49916 1009 aa16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 ACTR2P61160 394 aa16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 PRKCEQ02156 737 aa16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 PPP1R7Q15435 360 aa16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 PACS2Q86VP3 889 aa16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 POLR3FQ9H1D9 316 aaPredicted RBP16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 ACTR5Q9H9F9 607 aaPredicted RBP16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 ACP6Q9NPH0 428 aa16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 SEPT9Q9UHD8 586 aaPredicted RBP16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 ANAPC7Q9UJX3 599 aa16.53■□□□□ 0.24
TNFSF13-202ENST00000349228 MYPNQ86TC9 1320 aa16.52■□□□□ 0.24
TNFSF13-202ENST00000349228 CYP1A1P04798 512 aaPredicted RBP16.52■□□□□ 0.24
TNFSF13-202ENST00000349228 SUPT20HL2P0C7V6 817 aa16.52■□□□□ 0.24
TNFSF13-202ENST00000349228 TMOD1P28289 359 aa16.52■□□□□ 0.24
TNFSF13-202ENST00000349228 CENPCQ03188 943 aa16.52■□□□□ 0.24
TNFSF13-202ENST00000349228 SUPT20HL1Q3ZLR7 823 aa16.52■□□□□ 0.24
TNFSF13-202ENST00000349228 SGO2Q562F6 1265 aa16.52■□□□□ 0.24
TNFSF13-202ENST00000349228 MFSD5Q6N075 450 aa16.52■□□□□ 0.24
TNFSF13-202ENST00000349228 TAOK1Q7L7X3 1001 aa16.52■□□□□ 0.24
TNFSF13-202ENST00000349228 TRMT1LQ7Z2T5 733 aaKnown RBP16.52■□□□□ 0.24
TNFSF13-202ENST00000349228 XPO6Q96QU8 1125 aaKnown RBP16.52■□□□□ 0.24
TNFSF13-202ENST00000349228 ACAD9Q9H845 621 aa16.52■□□□□ 0.24
TNFSF13-202ENST00000349228 MRPL47Q9HD33 250 aaKnown RBP16.52■□□□□ 0.24
TNFSF13-202ENST00000349228 ADGRA3Q8IWK6 1321 aa16.52■□□□□ 0.23
TNFSF13-202ENST00000349228 RIPK2O43353 540 aa16.52■□□□□ 0.23
TNFSF13-202ENST00000349228 C4BPAP04003 597 aaKnown RBP16.52■□□□□ 0.23
TNFSF13-202ENST00000349228 SHBGP04278 402 aa16.52■□□□□ 0.23
TNFSF13-202ENST00000349228 NSFP46459 744 aaKnown RBP16.52■□□□□ 0.23
TNFSF13-202ENST00000349228 GKAP1Q5VSY0 366 aaPredicted RBP16.52■□□□□ 0.23
TNFSF13-202ENST00000349228 TAS1R3Q7RTX0 852 aa16.52■□□□□ 0.23
TNFSF13-202ENST00000349228 TAX1BP1Q86VP1 789 aa16.52■□□□□ 0.23
TNFSF13-202ENST00000349228 CACNA2D3Q8IZS8 1091 aa16.52■□□□□ 0.23
TNFSF13-202ENST00000349228 BBOF1Q8ND07 529 aa16.52■□□□□ 0.23
TNFSF13-202ENST00000349228 CHMP6Q96FZ7 201 aa16.52■□□□□ 0.23
TNFSF13-202ENST00000349228 BTBD6Q96KE9 485 aa16.52■□□□□ 0.23
TNFSF13-202ENST00000349228 TEX13BQ9BXU2 312 aa16.52■□□□□ 0.23
TNFSF13-202ENST00000349228 SEMA4AQ9H3S1 761 aa16.52■□□□□ 0.23
TNFSF13-202ENST00000349228 CHORDC1Q9UHD1 332 aaPredicted RBP16.52■□□□□ 0.23
TNFSF13-202ENST00000349228 DDX20Q9UHI6 824 aaKnown RBP16.52■□□□□ 0.23
TNFSF13-202ENST00000349228 AGO2Q9UKV8 859 aaKnown RBP16.52■□□□□ 0.23
TNFSF13-202ENST00000349228 ZNF214Q9UL59 606 aaPredicted RBP16.52■□□□□ 0.23
TNFSF13-202ENST00000349228 RGS20O76081 388 aa16.51■□□□□ 0.23
TNFSF13-202ENST00000349228 GAS8O95995 478 aa16.51■□□□□ 0.23
TNFSF13-202ENST00000349228 HLA-DRAP01903 254 aa16.51■□□□□ 0.23
TNFSF13-202ENST00000349228 PTPRAP18433 802 aa16.51■□□□□ 0.23
TNFSF13-202ENST00000349228 TBXAS1P24557 533 aaPredicted RBP16.51■□□□□ 0.23
TNFSF13-202ENST00000349228 ATP5DP30049 168 aa16.51■□□□□ 0.23
TNFSF13-202ENST00000349228 ICAM3P32942 547 aa16.51■□□□□ 0.23
TNFSF13-202ENST00000349228 NAMPTP43490 491 aa16.51■□□□□ 0.23
TNFSF13-202ENST00000349228 DGKZQ13574 1117 aa16.51■□□□□ 0.23
TNFSF13-202ENST00000349228 PTK6Q13882 451 aa16.51■□□□□ 0.23
TNFSF13-202ENST00000349228 TBC1D10BQ4KMP7 808 aaPredicted RBP16.51■□□□□ 0.23
TNFSF13-202ENST00000349228 TNFAIP8L3Q5GJ75 292 aa16.51■□□□□ 0.23
TNFSF13-202ENST00000349228 CEP128Q6ZU80 1094 aa16.51■□□□□ 0.23
TNFSF13-202ENST00000349228 CCDC121Q6ZUS5 278 aa16.51■□□□□ 0.23
TNFSF13-202ENST00000349228 CPLX4Q7Z7G2 160 aa16.51■□□□□ 0.23
TNFSF13-202ENST00000349228 ZNF516Q92618 1163 aa16.51■□□□□ 0.23
TNFSF13-202ENST00000349228 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.51■□□□□ 0.23
TNFSF13-202ENST00000349228 CYP39A1Q9NYL5 469 aa16.51■□□□□ 0.23
TNFSF13-202ENST00000349228 TCRBV7S2A1N4TA0A589 114 aa16.5■□□□□ 0.23
TNFSF13-202ENST00000349228 RASGRF2O14827 1237 aa16.5■□□□□ 0.23
TNFSF13-202ENST00000349228 CLDN3O15551 220 aa16.5■□□□□ 0.23
TNFSF13-202ENST00000349228 PSTPIP1O43586 416 aa16.5■□□□□ 0.23
TNFSF13-202ENST00000349228 PROSCO94903 275 aa16.5■□□□□ 0.23
TNFSF13-202ENST00000349228 ATG7O95352 703 aa16.5■□□□□ 0.23
TNFSF13-202ENST00000349228 TNNI1P19237 187 aa16.5■□□□□ 0.23
TNFSF13-202ENST00000349228 POLGP54098 1239 aaPredicted RBP16.5■□□□□ 0.23
TNFSF13-202ENST00000349228 CCDC60Q8IWA6 550 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms