RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 TMC3Q7Z5M5 1100 aa22.84■■□□□ 1.25
PTPN18-202ENST00000347849 LMBR1Q8WVP7 490 aa22.84■■□□□ 1.25
PTPN18-202ENST00000347849 DNAJC25-GNG10A0A024R161 153 aa22.84■■□□□ 1.25
PTPN18-202ENST00000347849 DLATP10515 647 aaKnown RBP22.84■■□□□ 1.25
PTPN18-202ENST00000347849 TAS1R2Q8TE23 839 aa22.84■■□□□ 1.25
PTPN18-202ENST00000347849 KREMEN1Q96MU8 473 aa22.84■■□□□ 1.25
PTPN18-202ENST00000347849 NIFKQ9BYG3 293 aaKnown RBP22.84■■□□□ 1.25
PTPN18-202ENST00000347849 LRRIQ4A6NIV6 560 aa22.83■■□□□ 1.25
PTPN18-202ENST00000347849 SLC25A27O95847 323 aa22.83■■□□□ 1.25
PTPN18-202ENST00000347849 H2AFZP0C0S5 128 aa22.83■■□□□ 1.25
PTPN18-202ENST00000347849 ARL2P36404 184 aa22.83■■□□□ 1.25
PTPN18-202ENST00000347849 TARBP2Q15633 366 aaKnown RBP22.83■■□□□ 1.25
PTPN18-202ENST00000347849 BRDTQ58F21 947 aaPredicted RBP22.83■■□□□ 1.25
PTPN18-202ENST00000347849 LMBRD2Q68DH5 695 aaPredicted RBP22.83■■□□□ 1.25
PTPN18-202ENST00000347849 H2AFVQ71UI9 128 aa22.83■■□□□ 1.25
PTPN18-202ENST00000347849 ARMC9Q7Z3E5 817 aa22.83■■□□□ 1.25
PTPN18-202ENST00000347849 MFSD14AQ96MC6 490 aa22.83■■□□□ 1.25
PTPN18-202ENST00000347849 MMP19Q99542 508 aa22.83■■□□□ 1.25
PTPN18-202ENST00000347849 ACTR5Q9H9F9 607 aaPredicted RBP22.83■■□□□ 1.25
PTPN18-202ENST00000347849 PDGFCQ9NRA1 345 aa22.83■■□□□ 1.25
PTPN18-202ENST00000347849 GALCP54803 685 aa22.83■■□□□ 1.24
PTPN18-202ENST00000347849 CYP24A1Q07973 514 aa22.83■■□□□ 1.24
PTPN18-202ENST00000347849 NEDD9Q14511 834 aa22.83■■□□□ 1.24
PTPN18-202ENST00000347849 METTL7BQ6UX53 244 aa22.83■■□□□ 1.24
PTPN18-202ENST00000347849 CPLX4Q7Z7G2 160 aa22.83■■□□□ 1.24
PTPN18-202ENST00000347849 RASGEF1CQ8N431 466 aa22.83■■□□□ 1.24
PTPN18-202ENST00000347849 C3orf20Q8ND61 904 aa22.83■■□□□ 1.24
PTPN18-202ENST00000347849 STXBP5LQ9Y2K9 1186 aa22.83■■□□□ 1.24
PTPN18-202ENST00000347849 UTP11Q9Y3A2 253 aaKnown RBP22.83■■□□□ 1.24
PTPN18-202ENST00000347849 TTLL13PA6NNM8 815 aa22.82■■□□□ 1.24
PTPN18-202ENST00000347849 P4HA2O15460 535 aa22.82■■□□□ 1.24
PTPN18-202ENST00000347849 MCCD1P59942 119 aaPredicted RBP22.82■■□□□ 1.24
PTPN18-202ENST00000347849 IFFO1Q0D2I5 559 aa22.82■■□□□ 1.24
PTPN18-202ENST00000347849 KCTD2Q14681 263 aa22.82■■□□□ 1.24
PTPN18-202ENST00000347849 ZBTB41Q5SVQ8 909 aa22.82■■□□□ 1.24
PTPN18-202ENST00000347849 FASTKD5Q7L8L6 764 aaKnown RBP22.82■■□□□ 1.24
PTPN18-202ENST00000347849 SLFN11Q7Z7L1 901 aa22.82■■□□□ 1.24
PTPN18-202ENST00000347849 NT5DC3Q86UY8 548 aa22.82■■□□□ 1.24
PTPN18-202ENST00000347849 CACNA2D3Q8IZS8 1091 aa22.82■■□□□ 1.24
PTPN18-202ENST00000347849 MDM1Q8TC05 714 aa22.82■■□□□ 1.24
PTPN18-202ENST00000347849 SLC7A3Q8WY07 619 aa22.82■■□□□ 1.24
PTPN18-202ENST00000347849 ZBTB10Q96DT7 871 aa22.82■■□□□ 1.24
PTPN18-202ENST00000347849 SLITRK6Q9H5Y7 841 aa22.82■■□□□ 1.24
PTPN18-202ENST00000347849 SUCLA2Q9P2R7 463 aaPredicted RBP22.82■■□□□ 1.24
PTPN18-202ENST00000347849 ATP8A1Q9Y2Q0 1164 aa22.82■■□□□ 1.24
PTPN18-202ENST00000347849 IBSPP21815 317 aaPredicted RBP22.82■■□□□ 1.24
PTPN18-202ENST00000347849 KIF22Q14807 665 aa22.82■■□□□ 1.24
PTPN18-202ENST00000347849 ANKRD20A8PQ5CZ79 823 aa22.82■■□□□ 1.24
PTPN18-202ENST00000347849 GPD1LQ8N335 351 aa22.82■■□□□ 1.24
PTPN18-202ENST00000347849 SEPT1Q8WYJ6 367 aa22.82■■□□□ 1.24
PTPN18-202ENST00000347849 ZNF516Q92618 1163 aa22.82■■□□□ 1.24
PTPN18-202ENST00000347849 OSGEPQ9NPF4 335 aa22.82■■□□□ 1.24
PTPN18-202ENST00000347849 LRRC37A2A6NM11 1700 aa22.81■■□□□ 1.24
PTPN18-202ENST00000347849 CCDC172P0C7W6 258 aa22.81■■□□□ 1.24
PTPN18-202ENST00000347849 ABCB4P21439 1286 aa22.81■■□□□ 1.24
PTPN18-202ENST00000347849 OSBPP22059 807 aa22.81■■□□□ 1.24
PTPN18-202ENST00000347849 ACOT2P49753 483 aa22.81■■□□□ 1.24
PTPN18-202ENST00000347849 CETN1Q12798 172 aa22.81■■□□□ 1.24
PTPN18-202ENST00000347849 BYSLQ13895 437 aaKnown RBP22.81■■□□□ 1.24
PTPN18-202ENST00000347849 SV2AQ7L0J3 742 aa22.81■■□□□ 1.24
PTPN18-202ENST00000347849 VPS36Q86VN1 386 aa22.81■■□□□ 1.24
PTPN18-202ENST00000347849 PPM1KQ8N3J5 372 aa22.81■■□□□ 1.24
PTPN18-202ENST00000347849 TRIM51Q9BSJ1 452 aa22.81■■□□□ 1.24
PTPN18-202ENST00000347849 PI4K2AQ9BTU6 479 aa22.81■■□□□ 1.24
PTPN18-202ENST00000347849 SEPT11Q9NVA2 429 aaKnown RBP22.81■■□□□ 1.24
PTPN18-202ENST00000347849 HAUS2Q9NVX0 235 aa22.81■■□□□ 1.24
PTPN18-202ENST00000347849 CLEC11AQ9Y240 323 aa22.81■■□□□ 1.24
PTPN18-202ENST00000347849 NR2E1Q9Y466 385 aa22.81■■□□□ 1.24
PTPN18-202ENST00000347849 FGGP02679 453 aa22.81■■□□□ 1.24
PTPN18-202ENST00000347849 TGFB3P10600 412 aa22.81■■□□□ 1.24
PTPN18-202ENST00000347849 LIG4P49917 911 aa22.81■■□□□ 1.24
PTPN18-202ENST00000347849 NLRP11P59045 1033 aaKnown RBP22.81■■□□□ 1.24
PTPN18-202ENST00000347849 GPR162Q16538 588 aa22.81■■□□□ 1.24
PTPN18-202ENST00000347849 KRT39Q6A163 491 aa22.81■■□□□ 1.24
PTPN18-202ENST00000347849 SLC10A4Q96EP9 437 aa22.81■■□□□ 1.24
PTPN18-202ENST00000347849 GPR20Q99678 358 aa22.81■■□□□ 1.24
PTPN18-202ENST00000347849 TARS2Q9BW92 718 aaKnown RBP22.81■■□□□ 1.24
PTPN18-202ENST00000347849 SEZ6Q53EL9 994 aa22.8■■□□□ 1.24
PTPN18-202ENST00000347849 GKAP1Q5VSY0 366 aaPredicted RBP22.8■■□□□ 1.24
PTPN18-202ENST00000347849 ADAT2Q7Z6V5 191 aaKnown RBP22.8■■□□□ 1.24
PTPN18-202ENST00000347849 FUKQ8N0W3 1084 aa22.8■■□□□ 1.24
PTPN18-202ENST00000347849 SGPL1O95470 568 aa22.8■■□□□ 1.24
PTPN18-202ENST00000347849 PRPF4BQ13523 1007 aaKnown RBP22.8■■□□□ 1.24
PTPN18-202ENST00000347849 CAPSQ13938 189 aa22.8■■□□□ 1.24
PTPN18-202ENST00000347849 GJC2Q5T442 439 aaPredicted RBP22.8■■□□□ 1.24
PTPN18-202ENST00000347849 CYB5D1Q6P9G0 228 aa22.8■■□□□ 1.24
PTPN18-202ENST00000347849 SYCE1Q8N0S2 351 aa22.8■■□□□ 1.24
PTPN18-202ENST00000347849 TATDN2Q93075 761 aa22.8■■□□□ 1.24
PTPN18-202ENST00000347849 ARHGEF26Q96DR7 871 aa22.8■■□□□ 1.24
PTPN18-202ENST00000347849 TMEM8AQ9HCN3 771 aa22.8■■□□□ 1.24
PTPN18-202ENST00000347849 FAM114A2Q9NRY5 505 aa22.8■■□□□ 1.24
PTPN18-202ENST00000347849 MCM3APO60318 1980 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 C5orf60A6NFR6 353 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 CALCAP01258 141 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 GARTP22102 1010 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 ANXA13P27216 316 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 MKRN4PQ13434 485 aaPredicted RBP22.79■■□□□ 1.24
PTPN18-202ENST00000347849 SNAPC2Q13487 334 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 CELF3Q5SZQ8 465 aaKnown RBP22.79■■□□□ 1.24
PTPN18-202ENST00000347849 SCARA3Q6AZY7 606 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms