RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 EPM2AIP1Q7L775 607 aaPredicted RBP12.43□□□□□ -0.42
TRAF3-201ENST00000347662 BBS7Q8IWZ6 715 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 MYRIPQ8NFW9 859 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 SIKE1Q9BRV8 207 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 C17orf80Q9BSJ5 609 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 PSD3Q9NYI0 1048 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 MMP1P03956 469 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 HIST1H2AGP0C0S8 130 aaPredicted RBP12.43□□□□□ -0.42
TRAF3-201ENST00000347662 PLA2G4BP0C869 781 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 HIST1H2ADP20671 130 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 KCNJ6P48051 423 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 HIST1H2AHQ96KK5 128 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 HIST1H2AJQ99878 128 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 H2AFJQ9BTM1 129 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 FEM1BQ9UK73 627 aa12.43□□□□□ -0.42
TRAF3-201ENST00000347662 RIMS1Q86UR5 1692 aaKnown RBP12.43□□□□□ -0.42
TRAF3-201ENST00000347662 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.42□□□□□ -0.42
TRAF3-201ENST00000347662 RNF103O00237 685 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 FAM107AO95990 144 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 RPS7P62081 194 aaKnown RBP12.42□□□□□ -0.42
TRAF3-201ENST00000347662 MDH1BQ5I0G3 518 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 DGKHQ86XP1 1220 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 OSBPL6Q9BZF3 934 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 SLC24A3Q9HC58 644 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 N6AMT1Q9Y5N5 214 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 ADGRB3O60242 1522 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 CAMSAP1Q5T5Y3 1602 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 UPP2O95045 317 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 GAP43P17677 238 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 PLCG1P19174 1290 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 BEND6Q5SZJ8 279 aaPredicted RBP12.42□□□□□ -0.42
TRAF3-201ENST00000347662 ISCA1Q9BUE6 129 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 ZMYND8Q9ULU4 1186 aaPredicted RBP12.42□□□□□ -0.42
TRAF3-201ENST00000347662 PKP3Q9Y446 797 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 A0A087X0T9 212 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 TRIM13O60858 407 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 ITPK1Q13572 414 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 SGO1Q5FBB7 561 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 PPP1R2P3Q6NXS1 205 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 SH3GL1Q99961 368 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 SCUBE2Q9NQ36 999 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 FBXO40Q9UH90 709 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 LRRIQ3A6PVS8 624 aaPredicted RBP12.42□□□□□ -0.42
TRAF3-201ENST00000347662 PSMC5P62195 406 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 PDAP1Q13442 181 aaKnown RBP12.42□□□□□ -0.42
TRAF3-201ENST00000347662 CNOT10Q9H9A5 744 aaKnown RBP12.42□□□□□ -0.42
TRAF3-201ENST00000347662 LMBRD1Q9NUN5 540 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 ADAM21Q9UKJ8 722 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 RALAP11233 206 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 SERPINB3P29508 390 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 STAT3P40763 770 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 SNX30Q5VWJ9 437 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 BTBD8Q5XKL5 378 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 DDX50Q9BQ39 737 aaKnown RBP12.42□□□□□ -0.42
TRAF3-201ENST00000347662 BRD8Q9H0E9 1235 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 TMEM60Q9H2L4 133 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 MAP3K20Q9NYL2 800 aaKnown RBP12.42□□□□□ -0.42
TRAF3-201ENST00000347662 TMEM63CQ9P1W3 806 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 PCDHB6Q9Y5E3 794 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 IQGAP3Q86VI3 1631 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 TTLL4Q14679 1199 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 TRIM62Q9BVG3 475 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 SPRTNQ9H040 489 aaPredicted RBP12.42□□□□□ -0.42
TRAF3-201ENST00000347662 MRPL39Q9NYK5 338 aaKnown RBP12.42□□□□□ -0.42
TRAF3-201ENST00000347662 TTC7AQ9ULT0 858 aaPredicted RBP12.42□□□□□ -0.42
TRAF3-201ENST00000347662 ZBTB5O15062 677 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 HPGDP15428 266 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 RPS6P62753 249 aaKnown RBP12.42□□□□□ -0.42
TRAF3-201ENST00000347662 C6orf10Q5SRN2 563 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 CCDC103Q8IW40 242 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 MB21D1Q8N884 522 aa12.42□□□□□ -0.42
TRAF3-201ENST00000347662 LAD1O00515 517 aa12.41□□□□□ -0.42
TRAF3-201ENST00000347662 CELF2O95319 508 aaKnown RBP12.41□□□□□ -0.42
TRAF3-201ENST00000347662 NFICP08651 508 aa12.41□□□□□ -0.42
TRAF3-201ENST00000347662 IFNAR1P17181 557 aa12.41□□□□□ -0.42
TRAF3-201ENST00000347662 SSTR3P32745 418 aaPredicted RBP12.41□□□□□ -0.42
TRAF3-201ENST00000347662 ABCD1P33897 745 aa12.41□□□□□ -0.42
TRAF3-201ENST00000347662 KPNA1P52294 538 aaPredicted RBP12.41□□□□□ -0.42
TRAF3-201ENST00000347662 OLFML2BQ68BL8 750 aa12.41□□□□□ -0.42
TRAF3-201ENST00000347662 DCAF4Q8WV16 495 aa12.41□□□□□ -0.42
TRAF3-201ENST00000347662 HSPBP1Q9NZL4 362 aa12.41□□□□□ -0.42
TRAF3-201ENST00000347662 ANGPT2O15123 496 aa12.41□□□□□ -0.42
TRAF3-201ENST00000347662 GMPSP49915 693 aaPredicted RBP12.41□□□□□ -0.42
TRAF3-201ENST00000347662 ARHGEF7Q14155 803 aa12.41□□□□□ -0.42
TRAF3-201ENST00000347662 RHPN2Q8IUC4 686 aa12.41□□□□□ -0.42
TRAF3-201ENST00000347662 SPASTQ9UBP0 616 aa12.41□□□□□ -0.42
TRAF3-201ENST00000347662 TSC22D4Q9Y3Q8 395 aa12.41□□□□□ -0.42
TRAF3-201ENST00000347662 RASA4BC9J798 803 aa12.41□□□□□ -0.42
TRAF3-201ENST00000347662 RGS5O15539 181 aa12.41□□□□□ -0.42
TRAF3-201ENST00000347662 RASA4O43374 803 aa12.41□□□□□ -0.42
TRAF3-201ENST00000347662 ATP9BO43861 1147 aa12.41□□□□□ -0.42
TRAF3-201ENST00000347662 MZF1P28698 734 aaPredicted RBP12.41□□□□□ -0.42
TRAF3-201ENST00000347662 SCARF1Q14162 830 aa12.41□□□□□ -0.42
TRAF3-201ENST00000347662 NSUN6Q8TEA1 469 aaKnown RBP12.41□□□□□ -0.42
TRAF3-201ENST00000347662 THAP11Q96EK4 314 aa12.41□□□□□ -0.42
TRAF3-201ENST00000347662 KIFC1Q9BW19 673 aa12.41□□□□□ -0.42
TRAF3-201ENST00000347662 MUC3BQ9H195 1237 aa12.41□□□□□ -0.42
TRAF3-201ENST00000347662 PTCH1Q13635 1447 aa12.41□□□□□ -0.42
TRAF3-201ENST00000347662 NEDD4P46934 1319 aa12.41□□□□□ -0.42
TRAF3-201ENST00000347662 COPB1P53618 953 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms