RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 PLXNA3P51805 1871 aa17.58■□□□□ 0.41
RAB5C-201ENST00000346213 MYH11P35749 1972 aa17.58■□□□□ 0.4
RAB5C-201ENST00000346213 I3L4J1 428 aa17.58■□□□□ 0.4
RAB5C-201ENST00000346213 ADAM12O43184 909 aa17.58■□□□□ 0.4
RAB5C-201ENST00000346213 FAM13AO94988 1023 aa17.58■□□□□ 0.4
RAB5C-201ENST00000346213 MCF2P10911 925 aa17.58■□□□□ 0.4
RAB5C-201ENST00000346213 CLCNKBP51801 687 aa17.58■□□□□ 0.4
RAB5C-201ENST00000346213 HSP90AA2PQ14568 343 aaPredicted RBP17.58■□□□□ 0.4
RAB5C-201ENST00000346213 PRSS55Q6UWB4 352 aaPredicted RBP17.58■□□□□ 0.4
RAB5C-201ENST00000346213 TNMDQ9H2S6 317 aa17.58■□□□□ 0.4
RAB5C-201ENST00000346213 GOLPH3LQ9H4A5 285 aa17.58■□□□□ 0.4
RAB5C-201ENST00000346213 ZHX3Q9H4I2 956 aa17.58■□□□□ 0.4
RAB5C-201ENST00000346213 C11orf16Q9NQ32 467 aa17.58■□□□□ 0.4
RAB5C-201ENST00000346213 TBC1D7Q9P0N9 293 aa17.58■□□□□ 0.4
RAB5C-201ENST00000346213 TEX28O15482 410 aa17.57■□□□□ 0.4
RAB5C-201ENST00000346213 TOM1L1O75674 476 aa17.57■□□□□ 0.4
RAB5C-201ENST00000346213 PIGRP01833 764 aa17.57■□□□□ 0.4
RAB5C-201ENST00000346213 THP07101 528 aa17.57■□□□□ 0.4
RAB5C-201ENST00000346213 CXCL8P10145 99 aa17.57■□□□□ 0.4
RAB5C-201ENST00000346213 CLCN4P51793 760 aa17.57■□□□□ 0.4
RAB5C-201ENST00000346213 WNT7BP56706 349 aa17.57■□□□□ 0.4
RAB5C-201ENST00000346213 GTF2BQ00403 316 aa17.57■□□□□ 0.4
RAB5C-201ENST00000346213 DSG1Q02413 1049 aa17.57■□□□□ 0.4
RAB5C-201ENST00000346213 FAM160A1Q05DH4 1040 aa17.57■□□□□ 0.4
RAB5C-201ENST00000346213 SNW1Q13573 536 aaKnown RBP17.57■□□□□ 0.4
RAB5C-201ENST00000346213 NOLC1Q14978 699 aaKnown RBP eCLIP17.57■□□□□ 0.4
RAB5C-201ENST00000346213 MAP4K3Q8IVH8 894 aa17.57■□□□□ 0.4
RAB5C-201ENST00000346213 HACE1Q8IYU2 909 aa17.57■□□□□ 0.4
RAB5C-201ENST00000346213 FSIP1Q8NA03 581 aa17.57■□□□□ 0.4
RAB5C-201ENST00000346213 CNTN3Q9P232 1028 aa17.57■□□□□ 0.4
RAB5C-201ENST00000346213 LARSQ9P2J5 1176 aaKnown RBP17.57■□□□□ 0.4
RAB5C-201ENST00000346213 TUBGCP4Q9UGJ1 667 aa17.57■□□□□ 0.4
RAB5C-201ENST00000346213 NCOR1O75376 2440 aa17.57■□□□□ 0.4
RAB5C-201ENST00000346213 VWA8A3KMH1 1905 aa17.57■□□□□ 0.4
RAB5C-201ENST00000346213 TRIP11Q15643 1979 aa17.56■□□□□ 0.4
RAB5C-201ENST00000346213 FRMD3A2A2Y4 597 aa17.56■□□□□ 0.4
RAB5C-201ENST00000346213 BRCC3P46736 316 aa17.56■□□□□ 0.4
RAB5C-201ENST00000346213 GUCY2FP51841 1108 aa17.56■□□□□ 0.4
RAB5C-201ENST00000346213 SCARA3Q6AZY7 606 aa17.56■□□□□ 0.4
RAB5C-201ENST00000346213 RSPO2Q6UXX9 243 aaPredicted RBP17.56■□□□□ 0.4
RAB5C-201ENST00000346213 ZPBP2Q6X784 338 aa17.56■□□□□ 0.4
RAB5C-201ENST00000346213 PPP2R3CQ969Q6 453 aa17.56■□□□□ 0.4
RAB5C-201ENST00000346213 FAM84AQ96KN4 292 aa17.56■□□□□ 0.4
RAB5C-201ENST00000346213 ADSSP30520 456 aa17.55■□□□□ 0.4
RAB5C-201ENST00000346213 STAT6P42226 847 aa17.55■□□□□ 0.4
RAB5C-201ENST00000346213 UPP1Q16831 310 aa17.55■□□□□ 0.4
RAB5C-201ENST00000346213 GLYCTKQ8IVS8 523 aa17.55■□□□□ 0.4
RAB5C-201ENST00000346213 ADHFE1Q8IWW8 467 aa17.55■□□□□ 0.4
RAB5C-201ENST00000346213 GJD3Q8N144 294 aa17.55■□□□□ 0.4
RAB5C-201ENST00000346213 RXFP1Q9HBX9 757 aa17.55■□□□□ 0.4
RAB5C-201ENST00000346213 KRT18P05783 430 aaKnown RBP17.55■□□□□ 0.4
RAB5C-201ENST00000346213 SPATA31D3P0C874 917 aa17.55■□□□□ 0.4
RAB5C-201ENST00000346213 SP100P23497 879 aaPredicted RBP17.55■□□□□ 0.4
RAB5C-201ENST00000346213 CMA1P23946 247 aa17.55■□□□□ 0.4
RAB5C-201ENST00000346213 GLUD2P49448 558 aa17.55■□□□□ 0.4
RAB5C-201ENST00000346213 SMTNP53814 917 aa17.55■□□□□ 0.4
RAB5C-201ENST00000346213 STRN3Q13033 797 aa17.55■□□□□ 0.4
RAB5C-201ENST00000346213 ENOX2Q16206 610 aaKnown RBP17.55■□□□□ 0.4
RAB5C-201ENST00000346213 SPATA31D4Q6ZUB0 917 aa17.55■□□□□ 0.4
RAB5C-201ENST00000346213 ZNF720Q7Z2F6 126 aa17.55■□□□□ 0.4
RAB5C-201ENST00000346213 GRAMD1CQ8IYS0 662 aa17.55■□□□□ 0.4
RAB5C-201ENST00000346213 FMR1NBQ8N0W7 255 aaPredicted RBP17.55■□□□□ 0.4
RAB5C-201ENST00000346213 UBE2Q2Q8WVN8 375 aa17.55■□□□□ 0.4
RAB5C-201ENST00000346213 DHX58Q96C10 678 aa17.55■□□□□ 0.4
RAB5C-201ENST00000346213 TCHPQ9BT92 498 aa17.55■□□□□ 0.4
RAB5C-201ENST00000346213 CCDC39Q9UFE4 941 aa17.55■□□□□ 0.4
RAB5C-201ENST00000346213 A0A0B4J269 797 aa17.54■□□□□ 0.4
RAB5C-201ENST00000346213 PPEF2O14830 753 aa17.54■□□□□ 0.4
RAB5C-201ENST00000346213 CUTAO60888 179 aa17.54■□□□□ 0.4
RAB5C-201ENST00000346213 TBCAO75347 108 aaKnown RBP17.54■□□□□ 0.4
RAB5C-201ENST00000346213 CCDC192P0DO97 292 aa17.54■□□□□ 0.4
RAB5C-201ENST00000346213 KCNE1P15382 129 aa17.54■□□□□ 0.4
RAB5C-201ENST00000346213 HOXD13P35453 343 aa17.54■□□□□ 0.4
RAB5C-201ENST00000346213 CAMK4Q16566 473 aa17.54■□□□□ 0.4
RAB5C-201ENST00000346213 RARS2Q5T160 578 aaKnown RBP17.54■□□□□ 0.4
RAB5C-201ENST00000346213 SV2BQ7L1I2 683 aa17.54■□□□□ 0.4
RAB5C-201ENST00000346213 CCDC94Q9BW85 323 aaPredicted RBP17.54■□□□□ 0.4
RAB5C-201ENST00000346213 COLEC11Q9BWP8 271 aa17.54■□□□□ 0.4
RAB5C-201ENST00000346213 ST6GALNAC4Q9H4F1 302 aa17.54■□□□□ 0.4
RAB5C-201ENST00000346213 POMKQ9H5K3 350 aa17.54■□□□□ 0.4
RAB5C-201ENST00000346213 KBTBD4Q9NVX7 518 aa17.54■□□□□ 0.4
RAB5C-201ENST00000346213 PDCD11Q14690 1871 aaKnown RBP17.53■□□□□ 0.4
RAB5C-201ENST00000346213 TTC26A0AVF1 554 aa17.53■□□□□ 0.4
RAB5C-201ENST00000346213 HNRNPDLO14979 420 aaKnown RBP17.53■□□□□ 0.4
RAB5C-201ENST00000346213 KINO60870 393 aaKnown RBP17.53■□□□□ 0.4
RAB5C-201ENST00000346213 URODP06132 367 aa17.53■□□□□ 0.4
RAB5C-201ENST00000346213 UVSSAQ2YD98 709 aa17.53■□□□□ 0.4
RAB5C-201ENST00000346213 PUS10Q3MIT2 529 aaKnown RBP17.53■□□□□ 0.4
RAB5C-201ENST00000346213 RESP18Q5W5W9 173 aa17.53■□□□□ 0.4
RAB5C-201ENST00000346213 CRELD2Q6UXH1 353 aaPredicted RBP17.53■□□□□ 0.4
RAB5C-201ENST00000346213 LNX1Q8TBB1 728 aaPredicted RBP17.53■□□□□ 0.4
RAB5C-201ENST00000346213 RIN2Q8WYP3 895 aaPredicted RBP17.53■□□□□ 0.4
RAB5C-201ENST00000346213 ACAP3Q96P50 834 aa17.53■□□□□ 0.4
RAB5C-201ENST00000346213 CLSTN3Q9BQT9 956 aa17.53■□□□□ 0.4
RAB5C-201ENST00000346213 MRPL17Q9NRX2 175 aaKnown RBP17.53■□□□□ 0.4
RAB5C-201ENST00000346213 FAM237AA0A1B0GTK4 181 aa17.52■□□□□ 0.4
RAB5C-201ENST00000346213 A0A1B0GVL5 298 aa17.52■□□□□ 0.4
RAB5C-201ENST00000346213 LOC730098B7Z3J9 87 aa17.52■□□□□ 0.4
RAB5C-201ENST00000346213 CLDN3O15551 220 aa17.52■□□□□ 0.4
RAB5C-201ENST00000346213 TADA2AO75478 443 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms