RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 FAXCQ5TGI0 409 aa14.2□□□□□ -0.14
CASC4-202ENST00000345795 MEI1Q5TIA1 1274 aa14.2□□□□□ -0.14
CASC4-202ENST00000345795 CCDC89Q8N998 374 aa14.2□□□□□ -0.14
CASC4-202ENST00000345795 KREMEN1Q96MU8 473 aa14.2□□□□□ -0.14
CASC4-202ENST00000345795 ERVK-5Q9HDB9 667 aa14.2□□□□□ -0.14
CASC4-202ENST00000345795 MED4Q9NPJ6 270 aa14.2□□□□□ -0.14
CASC4-202ENST00000345795 SNX9Q9Y5X1 595 aa14.2□□□□□ -0.14
CASC4-202ENST00000345795 PHF20L1A8MW92 1017 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 PIK3CDO00329 1044 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 O00370 1275 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 ITGB3P05106 788 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 RALAP11233 206 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 ATF2P15336 505 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 PSMA2P25787 234 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 GCLCP48506 637 aaPredicted RBP14.19□□□□□ -0.14
CASC4-202ENST00000345795 PLCB4Q15147 1175 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 PPP2R5AQ15172 486 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 ARMC9Q7Z3E5 817 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 PNMA2Q9UL42 364 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 COG5Q9UP83 839 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 CCL15-CCL14A0A0B4J2E2 113 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 M0QYV0 167 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 GAS8O95995 478 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 RARBP10826 455 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 GUCY2CP25092 1073 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 MAPK7Q13164 816 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 CCL15Q16663 113 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 GPAT2Q6NUI2 795 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 RFX6Q8HWS3 928 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 PBKQ96KB5 322 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 CABS1Q96KC9 395 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 PIH1D1Q9NWS0 290 aaKnown RBP14.19□□□□□ -0.14
CASC4-202ENST00000345795 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.19□□□□□ -0.14
CASC4-202ENST00000345795 UBIAD1Q9Y5Z9 338 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 CHD4Q14839 1912 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 TMED2Q15363 201 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 SCARA3Q6AZY7 606 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 MSANTD4Q8NCY6 345 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.19□□□□□ -0.14
CASC4-202ENST00000345795 SLC16A10Q8TF71 515 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 ANKRD36BP1Q96IX9 119 aa14.19□□□□□ -0.14
CASC4-202ENST00000345795 ZNF214Q9UL59 606 aaPredicted RBP14.19□□□□□ -0.14
CASC4-202ENST00000345795 DDX60Q8IY21 1712 aaKnown RBP14.18□□□□□ -0.14
CASC4-202ENST00000345795 E2F8A0AVK6 867 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 H7C0C1 242 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 NPTXRO95502 500 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 MYL3P08590 195 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 ATP5OP48047 213 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 PSMC1P62191 440 aaKnown RBP14.18□□□□□ -0.14
CASC4-202ENST00000345795 KYNUQ16719 465 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 ZNF667Q5HYK9 610 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 CCDC63Q8NA47 563 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 TEPSINQ96N21 525 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 ADPGKQ9BRR6 497 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 SETD4Q9NVD3 440 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 ZSCAN5DPP0CG00 497 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 SAT1P21673 171 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 OSBPP22059 807 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 GLRA2P23416 452 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 KRT17Q04695 432 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 CYP24A1Q07973 514 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 NEDD9Q14511 834 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 BBS9Q3SYG4 887 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 CEP57Q86XR8 500 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 C4orf19Q8IY42 314 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 SRRM1Q8IYB3 904 aaKnown RBP14.18□□□□□ -0.14
CASC4-202ENST00000345795 IPO4Q8TEX9 1081 aaKnown RBP14.18□□□□□ -0.14
CASC4-202ENST00000345795 TXNRD2Q9NNW7 524 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 GPATCH2LQ9NWQ4 482 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 DHX15O43143 795 aaKnown RBP14.18□□□□□ -0.14
CASC4-202ENST00000345795 CST3P01034 146 aaPredicted RBP14.18□□□□□ -0.14
CASC4-202ENST00000345795 AKAP5P24588 427 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 ALDH5A1P51649 535 aaPredicted RBP14.18□□□□□ -0.14
CASC4-202ENST00000345795 C1orf228Q6PIY5 440 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 NEK9Q8TD19 979 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 EPS8L1Q8TE68 723 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 KIF12Q96FN5 646 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 MRIQ9BWK5 157 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 TMEM8AQ9HCN3 771 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 CACNG4Q9UBN1 327 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 MAD1L1Q9Y6D9 718 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 IKBKGQ9Y6K9 419 aa14.18□□□□□ -0.14
CASC4-202ENST00000345795 PLIN4Q96Q06 1357 aa14.17□□□□□ -0.14
CASC4-202ENST00000345795 C19orf81C9J6K1 198 aa14.17□□□□□ -0.14
CASC4-202ENST00000345795 SPAG7O75391 227 aa14.17□□□□□ -0.14
CASC4-202ENST00000345795 NEBLO76041 1014 aa14.17□□□□□ -0.14
CASC4-202ENST00000345795 GBP2P32456 591 aaPredicted RBP14.17□□□□□ -0.14
CASC4-202ENST00000345795 GPC3P51654 580 aa14.17□□□□□ -0.14
CASC4-202ENST00000345795 SLC29A2Q14542 456 aa14.17□□□□□ -0.14
CASC4-202ENST00000345795 EEF1DP3Q658K8 133 aa14.17□□□□□ -0.14
CASC4-202ENST00000345795 JAMLQ86YT9 394 aa14.17□□□□□ -0.14
CASC4-202ENST00000345795 RHOT2Q8IXI1 618 aa14.17□□□□□ -0.14
CASC4-202ENST00000345795 RSAD2Q8WXG1 361 aa14.17□□□□□ -0.14
CASC4-202ENST00000345795 RNF34Q969K3 372 aa14.17□□□□□ -0.14
CASC4-202ENST00000345795 LCMT1Q9UIC8 334 aa14.17□□□□□ -0.14
CASC4-202ENST00000345795 N4BP2Q86UW6 1770 aaPredicted RBP14.17□□□□□ -0.14
CASC4-202ENST00000345795 EPHX2P34913 555 aa14.17□□□□□ -0.14
CASC4-202ENST00000345795 HSD17B3P37058 310 aa14.17□□□□□ -0.14
CASC4-202ENST00000345795 RPL7AP62424 266 aaKnown RBP14.17□□□□□ -0.14
CASC4-202ENST00000345795 FAM102AQ5T9C2 384 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms