RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 KCND2Q9NZV8 630 aa20.33■□□□□ 0.85
HDAC4-201ENST00000345617 FAM170AA1A519 330 aa20.33■□□□□ 0.84
HDAC4-201ENST00000345617 PLA2G4AP47712 749 aa20.33■□□□□ 0.84
HDAC4-201ENST00000345617 ZNF200P98182 395 aaPredicted RBP20.33■□□□□ 0.84
HDAC4-201ENST00000345617 SFR1Q86XK3 245 aa20.33■□□□□ 0.84
HDAC4-201ENST00000345617 ARHGEF26Q96DR7 871 aa20.33■□□□□ 0.84
HDAC4-201ENST00000345617 C8orf37Q96NL8 207 aa20.33■□□□□ 0.84
HDAC4-201ENST00000345617 TUBA8Q9NY65 449 aaPredicted RBP20.33■□□□□ 0.84
HDAC4-201ENST00000345617 HPS5Q9UPZ3 1129 aa20.33■□□□□ 0.84
HDAC4-201ENST00000345617 RNF103O00237 685 aa20.33■□□□□ 0.84
HDAC4-201ENST00000345617 NLRP4Q96MN2 994 aa20.33■□□□□ 0.84
HDAC4-201ENST00000345617 C20orf96Q9NUD7 363 aaPredicted RBP20.33■□□□□ 0.84
HDAC4-201ENST00000345617 SSU72P8A0A1W2PR75 194 aa20.33■□□□□ 0.84
HDAC4-201ENST00000345617 PSMD14O00487 310 aa20.33■□□□□ 0.84
HDAC4-201ENST00000345617 TSPY1Q01534 308 aa20.33■□□□□ 0.84
HDAC4-201ENST00000345617 PIGHQ14442 188 aaPredicted RBP20.33■□□□□ 0.84
HDAC4-201ENST00000345617 AP5M1Q9H0R1 490 aa20.33■□□□□ 0.84
HDAC4-201ENST00000345617 GUCA1CO95843 209 aa20.32■□□□□ 0.84
HDAC4-201ENST00000345617 ATP5BP06576 529 aaKnown RBP20.32■□□□□ 0.84
HDAC4-201ENST00000345617 STX5Q13190 355 aa20.32■□□□□ 0.84
HDAC4-201ENST00000345617 C16orf72Q14CZ0 275 aa20.32■□□□□ 0.84
HDAC4-201ENST00000345617 STXBP2Q15833 593 aa20.32■□□□□ 0.84
HDAC4-201ENST00000345617 SLC18A3Q16572 532 aa20.32■□□□□ 0.84
HDAC4-201ENST00000345617 P3H2Q8IVL5 708 aa20.32■□□□□ 0.84
HDAC4-201ENST00000345617 RAD54LQ92698 747 aa20.32■□□□□ 0.84
HDAC4-201ENST00000345617 PDZK1P1A8MUH7 402 aa20.32■□□□□ 0.84
HDAC4-201ENST00000345617 IGF2BP3O00425 579 aaKnown RBP eCLIP20.32■□□□□ 0.84
HDAC4-201ENST00000345617 ASNA1O43681 348 aa20.32■□□□□ 0.84
HDAC4-201ENST00000345617 FLCNQ8NFG4 579 aa20.32■□□□□ 0.84
HDAC4-201ENST00000345617 TTC7AQ9ULT0 858 aaPredicted RBP20.32■□□□□ 0.84
HDAC4-201ENST00000345617 PEX5P50542 639 aa20.32■□□□□ 0.84
HDAC4-201ENST00000345617 CEP170Q5SW79 1584 aa20.32■□□□□ 0.84
HDAC4-201ENST00000345617 SERPINB12Q96P63 405 aa20.32■□□□□ 0.84
HDAC4-201ENST00000345617 CLEC4MQ9H2X3 399 aaPredicted RBP20.32■□□□□ 0.84
HDAC4-201ENST00000345617 PCIF1Q9H4Z3 704 aa20.32■□□□□ 0.84
HDAC4-201ENST00000345617 PAPOLBQ9NRJ5 636 aaKnown RBP20.32■□□□□ 0.84
HDAC4-201ENST00000345617 TRMT5Q32P41 509 aaKnown RBP20.32■□□□□ 0.84
HDAC4-201ENST00000345617 TBC1D22BQ9NU19 505 aa20.32■□□□□ 0.84
HDAC4-201ENST00000345617 HDAC6Q9UBN7 1215 aa20.32■□□□□ 0.84
HDAC4-201ENST00000345617 ZC3H7BQ9UGR2 993 aaKnown RBP20.32■□□□□ 0.84
HDAC4-201ENST00000345617 GSPT2Q8IYD1 628 aaKnown RBP20.32■□□□□ 0.84
HDAC4-201ENST00000345617 FMR1NBQ8N0W7 255 aaPredicted RBP20.32■□□□□ 0.84
HDAC4-201ENST00000345617 CCDC126Q96EE4 140 aa20.32■□□□□ 0.84
HDAC4-201ENST00000345617 FAM20AQ96MK3 541 aa20.32■□□□□ 0.84
HDAC4-201ENST00000345617 VCPKMTQ9H867 229 aa20.32■□□□□ 0.84
HDAC4-201ENST00000345617 FARP1Q9Y4F1 1045 aaPredicted RBP20.32■□□□□ 0.84
HDAC4-201ENST00000345617 IYDQ6PHW0 289 aa20.32■□□□□ 0.84
HDAC4-201ENST00000345617 ESYT3A0FGR9 886 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 UBAP1LF5GYI3 381 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 ELMOD1Q8N336 334 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 XPO6Q96QU8 1125 aaKnown RBP20.31■□□□□ 0.84
HDAC4-201ENST00000345617 FAM153AQ9UHL3 310 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 LRFN2Q9ULH4 789 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 KPNA4O00629 521 aaPredicted RBP20.31■□□□□ 0.84
HDAC4-201ENST00000345617 BFSP2Q13515 415 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 RCN1Q15293 331 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 MIGA2Q7L4E1 593 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 DIS3LQ8TF46 1054 aaKnown RBP20.31■□□□□ 0.84
HDAC4-201ENST00000345617 SENP7Q9BQF6 1050 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 SLC40A1Q9NP59 571 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 RIC8BQ9NVN3 520 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 HUS1O60921 280 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 ARHGAP27Q6ZUM4 889 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 CYB5D1Q6P9G0 228 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 FGD2Q7Z6J4 655 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 MANSC1Q9H8J5 431 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 CASS4Q9NQ75 786 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 MTSS1O43312 755 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 FTLP02792 175 aaPredicted RBP20.31■□□□□ 0.84
HDAC4-201ENST00000345617 GNAT1P11488 350 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 HMOX2P30519 316 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 RXRGP48443 463 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 VAMP7P51809 220 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 PDXDC2PQ6P474 469 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 ZNF589Q86UQ0 364 aaPredicted RBP20.31■□□□□ 0.84
HDAC4-201ENST00000345617 JADE3Q92613 823 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 IQGAP3Q86VI3 1631 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 HPCAP84074 193 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 COASYQ13057 564 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 APOL4Q9BPW4 351 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 FNDC3AQ9Y2H6 1198 aaKnown RBP20.31■□□□□ 0.84
HDAC4-201ENST00000345617 KRT20P35900 424 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 PRCPP42785 496 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 PSMC6P62333 389 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 KDM7AQ6ZMT4 941 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 PAGR1Q9BTK6 254 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 MYO3BQ8WXR4 1341 aa20.31■□□□□ 0.84
HDAC4-201ENST00000345617 GTF2IP78347 998 aa20.3■□□□□ 0.84
HDAC4-201ENST00000345617 CHRNDQ07001 517 aa20.3■□□□□ 0.84
HDAC4-201ENST00000345617 DYTNA2CJ06 578 aa20.3■□□□□ 0.84
HDAC4-201ENST00000345617 RHOBTB1O94844 696 aa20.3■□□□□ 0.84
HDAC4-201ENST00000345617 DGKHQ86XP1 1220 aa20.3■□□□□ 0.84
HDAC4-201ENST00000345617 C2orf40Q9H1Z8 148 aa20.3■□□□□ 0.84
HDAC4-201ENST00000345617 CLPTM1O96005 669 aa20.3■□□□□ 0.84
HDAC4-201ENST00000345617 C1DQ13901 141 aaKnown RBP20.3■□□□□ 0.84
HDAC4-201ENST00000345617 NUP93Q8N1F7 819 aa20.3■□□□□ 0.84
HDAC4-201ENST00000345617 NMRK1Q9NWW6 199 aa20.3■□□□□ 0.84
HDAC4-201ENST00000345617 WDR35Q9P2L0 1181 aa20.3■□□□□ 0.84
HDAC4-201ENST00000345617 TLR2O60603 784 aa20.3■□□□□ 0.84
HDAC4-201ENST00000345617 KRT6AP02538 564 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms