RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 ERCC6LQ2NKX8 1250 aa27.15■■□□□ 1.94
TRADD-201ENST00000345057 ZNF677Q86XU0 584 aa27.15■■□□□ 1.94
TRADD-201ENST00000345057 RPUSD2Q8IZ73 545 aaKnown RBP27.15■■□□□ 1.94
TRADD-201ENST00000345057 ANKRD36BP1Q96IX9 119 aa27.15■■□□□ 1.94
TRADD-201ENST00000345057 ADPGKQ9BRR6 497 aa27.15■■□□□ 1.94
TRADD-201ENST00000345057 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.15■■□□□ 1.941e-7■■■■■ 115.4
TRADD-201ENST00000345057 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.15■■□□□ 1.94
TRADD-201ENST00000345057 NOCTQ9UK39 431 aaKnown RBP27.15■■□□□ 1.94
TRADD-201ENST00000345057 V9GYY5 206 aaPredicted RBP27.15■■□□□ 1.94
TRADD-201ENST00000345057 MGAMO43451 1857 aa27.14■■□□□ 1.94
TRADD-201ENST00000345057 HAS3O00219 553 aa27.14■■□□□ 1.94
TRADD-201ENST00000345057 DUSP11O75319 330 aaKnown RBP27.14■■□□□ 1.94
TRADD-201ENST00000345057 TNNC2P02585 160 aa27.14■■□□□ 1.94
TRADD-201ENST00000345057 CYP11B1P15538 503 aa27.14■■□□□ 1.94
TRADD-201ENST00000345057 PSMC4P43686 418 aa27.14■■□□□ 1.94
TRADD-201ENST00000345057 NOP2P46087 812 aaKnown RBP27.14■■□□□ 1.94
TRADD-201ENST00000345057 EEF1DP3Q658K8 133 aa27.14■■□□□ 1.94
TRADD-201ENST00000345057 SYCE1Q8N0S2 351 aa27.14■■□□□ 1.94
TRADD-201ENST00000345057 OR5B17Q8NGF7 314 aa27.14■■□□□ 1.94
TRADD-201ENST00000345057 GCOM2Q9BZD3 368 aaPredicted RBP27.14■■□□□ 1.94
TRADD-201ENST00000345057 HDAC6Q9UBN7 1215 aa27.14■■□□□ 1.94
TRADD-201ENST00000345057 NCANO14594 1321 aa27.14■■□□□ 1.93
TRADD-201ENST00000345057 PALMO75781 387 aa27.13■■□□□ 1.93
TRADD-201ENST00000345057 SGPL1O95470 568 aa27.13■■□□□ 1.93
TRADD-201ENST00000345057 MYL3P08590 195 aa27.13■■□□□ 1.93
TRADD-201ENST00000345057 TMEM191BP0C7N4 346 aa27.13■■□□□ 1.93
TRADD-201ENST00000345057 GNAT1P11488 350 aa27.13■■□□□ 1.93
TRADD-201ENST00000345057 KRT5P13647 590 aa27.13■■□□□ 1.93
TRADD-201ENST00000345057 LACTBP83111 547 aaPredicted RBP27.13■■□□□ 1.93
TRADD-201ENST00000345057 CDR2Q01850 454 aa27.13■■□□□ 1.93
TRADD-201ENST00000345057 CUL2Q13617 745 aa27.13■■□□□ 1.93
TRADD-201ENST00000345057 FSCN1Q16658 493 aaKnown RBP27.13■■□□□ 1.93
TRADD-201ENST00000345057 RSRC2Q7L4I2 434 aaKnown RBP27.13■■□□□ 1.93
TRADD-201ENST00000345057 LRRN4CLQ8ND94 238 aa27.13■■□□□ 1.93
TRADD-201ENST00000345057 RFFLQ8WZ73 363 aa27.13■■□□□ 1.93
TRADD-201ENST00000345057 RABGGTAQ92696 567 aa27.13■■□□□ 1.93
TRADD-201ENST00000345057 FAM212AQ96EL1 285 aa27.13■■□□□ 1.93
TRADD-201ENST00000345057 RTN2O75298 545 aa27.13■■□□□ 1.93
TRADD-201ENST00000345057 NOP14P78316 857 aaKnown RBP27.13■■□□□ 1.93
TRADD-201ENST00000345057 SLC20A1Q8WUM9 679 aa27.13■■□□□ 1.93
TRADD-201ENST00000345057 ISCUQ9H1K1 167 aa27.13■■□□□ 1.93
TRADD-201ENST00000345057 PDZD7Q9H5P4 517 aa27.13■■□□□ 1.93
TRADD-201ENST00000345057 TRPC3Q13507 836 aa27.12■■□□□ 1.93
TRADD-201ENST00000345057 SGSM1Q2NKQ1 1148 aa27.12■■□□□ 1.93
TRADD-201ENST00000345057 CYP4F22Q6NT55 531 aa27.12■■□□□ 1.93
TRADD-201ENST00000345057 NOP9Q86U38 636 aaKnown RBP27.12■■□□□ 1.93
TRADD-201ENST00000345057 SLC47A2Q86VL8 602 aa27.12■■□□□ 1.93
TRADD-201ENST00000345057 GPR161Q8N6U8 529 aaKnown RBP27.12■■□□□ 1.93
TRADD-201ENST00000345057 PUF60Q9UHX1 559 aaKnown RBP27.12■■□□□ 1.93
TRADD-201ENST00000345057 PCDHB2Q9Y5E7 798 aa27.12■■□□□ 1.93
TRADD-201ENST00000345057 CYP2C9P11712 490 aa27.11■■□□□ 1.93
TRADD-201ENST00000345057 ARF4P18085 180 aaPredicted RBP27.11■■□□□ 1.93
TRADD-201ENST00000345057 NAA30Q147X3 362 aaPredicted RBP27.11■■□□□ 1.93
TRADD-201ENST00000345057 RHOT2Q8IXI1 618 aa27.11■■□□□ 1.93
TRADD-201ENST00000345057 PPP1R16BQ96T49 567 aa27.11■■□□□ 1.93
TRADD-201ENST00000345057 MTMR12Q9C0I1 747 aa27.11■■□□□ 1.93
TRADD-201ENST00000345057 ASB7Q9H672 318 aa27.11■■□□□ 1.93
TRADD-201ENST00000345057 RNF14Q9UBS8 474 aa27.11■■□□□ 1.93
TRADD-201ENST00000345057 TSPAN1O60635 241 aa27.1■■□□□ 1.93
TRADD-201ENST00000345057 CLSTN1O94985 981 aa27.1■■□□□ 1.93
TRADD-201ENST00000345057 ASS1P00966 412 aaKnown RBP27.1■■□□□ 1.93
TRADD-201ENST00000345057 CTGFP29279 349 aa27.1■■□□□ 1.93
TRADD-201ENST00000345057 DCAF4L1Q3SXM0 396 aa27.1■■□□□ 1.93
TRADD-201ENST00000345057 ZIC5Q96T25 663 aa27.1■■□□□ 1.93
TRADD-201ENST00000345057 SPC25Q9HBM1 224 aa27.1■■□□□ 1.93
TRADD-201ENST00000345057 A0A1B0GUA9 196 aa27.1■■□□□ 1.93
TRADD-201ENST00000345057 GPR25O00155 361 aa27.1■■□□□ 1.93
TRADD-201ENST00000345057 STAG3L1P0CL83 205 aa27.1■■□□□ 1.93
TRADD-201ENST00000345057 TEX35Q5T0J7 233 aa27.1■■□□□ 1.93
TRADD-201ENST00000345057 CAGE1Q8TC20 777 aa27.1■■□□□ 1.93
TRADD-201ENST00000345057 TAF4BQ92750 862 aa27.1■■□□□ 1.93
TRADD-201ENST00000345057 LENG1Q96BZ8 264 aaPredicted RBP27.1■■□□□ 1.93
TRADD-201ENST00000345057 FAXDC2Q96IV6 333 aa27.1■■□□□ 1.93
TRADD-201ENST00000345057 ADAMTS10Q9H324 1103 aa27.1■■□□□ 1.93
TRADD-201ENST00000345057 GRID2IPA4D2P6 1211 aa27.09■■□□□ 1.93
TRADD-201ENST00000345057 TMCO5BA8MYB1 307 aa27.09■■□□□ 1.93
TRADD-201ENST00000345057 TFAMQ00059 246 aaKnown RBP27.09■■□□□ 1.93
TRADD-201ENST00000345057 MEI1Q5TIA1 1274 aa27.09■■□□□ 1.93
TRADD-201ENST00000345057 TPCN2Q8NHX9 752 aa27.09■■□□□ 1.93
TRADD-201ENST00000345057 UBE2Q2Q8WVN8 375 aa27.09■■□□□ 1.93
TRADD-201ENST00000345057 OSBPL9Q96SU4 736 aa27.09■■□□□ 1.93
TRADD-201ENST00000345057 CYBAP13498 195 aa27.08■■□□□ 1.93
TRADD-201ENST00000345057 CHRNB2P17787 502 aa27.08■■□□□ 1.93
TRADD-201ENST00000345057 APLP1P51693 650 aa27.08■■□□□ 1.93
TRADD-201ENST00000345057 OSTNP61366 133 aa27.08■■□□□ 1.93
TRADD-201ENST00000345057 ADAM17P78536 824 aa27.08■■□□□ 1.93
TRADD-201ENST00000345057 TCEAL1Q15170 157 aa27.08■■□□□ 1.93
TRADD-201ENST00000345057 CD302Q8IX05 232 aa27.08■■□□□ 1.93
TRADD-201ENST00000345057 TLR10Q9BXR5 811 aa27.08■■□□□ 1.93
TRADD-201ENST00000345057 FAM49AQ9H0Q0 323 aaPredicted RBP27.08■■□□□ 1.93
TRADD-201ENST00000345057 APOBEC3GQ9HC16 384 aaKnown RBP27.08■■□□□ 1.93
TRADD-201ENST00000345057 C17orf102A2RUQ5 167 aa27.08■■□□□ 1.93
TRADD-201ENST00000345057 FTLP02792 175 aaPredicted RBP27.08■■□□□ 1.93
TRADD-201ENST00000345057 CXCL8P10145 99 aa27.08■■□□□ 1.93
TRADD-201ENST00000345057 GJA9P57773 515 aa27.08■■□□□ 1.93
TRADD-201ENST00000345057 PURAQ00577 322 aaKnown RBP27.08■■□□□ 1.93
TRADD-201ENST00000345057 FMO1Q01740 532 aa27.08■■□□□ 1.93
TRADD-201ENST00000345057 KIZQ2M2Z5 673 aa27.08■■□□□ 1.93
TRADD-201ENST00000345057 SPOPLQ6IQ16 392 aa27.08■■□□□ 1.93
TRADD-201ENST00000345057 PPP1R2P3Q6NXS1 205 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms