RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 H3BRJ5 948 aa17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 H7C4K7 107 aa17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 SSTR3P32745 418 aaPredicted RBP17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 CLEC17AQ6ZS10 378 aa17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 ELOA2Q8IYF1 753 aaPredicted RBP17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 NUP85Q9BW27 656 aa17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 KLC2Q9H0B6 622 aa17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 SEPT6Q14141 434 aa17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 SHROOM1Q2M3G4 852 aaPredicted RBP17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 RSPH14Q9UHP6 348 aa17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 FTLP02792 175 aaPredicted RBP17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 LGALS2P05162 132 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 APBA1Q02410 837 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 MYRIPQ8NFW9 859 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 NT5C1AQ9BXI3 368 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 RANBP17Q9H2T7 1088 aaKnown RBP17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 ZMYND8Q9ULU4 1186 aaPredicted RBP17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 USP49Q70CQ1 688 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.4■□□□□ 0.382e-6■■□□□ 12.8
SMARCA4-201ENST00000344626 CPB2Q96IY4 423 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 L3MBTL3Q96JM7 780 aaPredicted RBP17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 FAM49BQ9NUQ9 324 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 PARP4Q9UKK3 1724 aaKnown RBP17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 THP07101 528 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 GSTA1P08263 222 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 GSTA2P09210 222 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 ZFXP17010 805 aaPredicted RBP17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 PRKCZQ05513 592 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 FSTL1Q12841 308 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 RAPH1Q70E73 1250 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 C7orf61Q8IZ16 206 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 SLITRK1Q96PX8 696 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 STK33Q9BYT3 514 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 KLHL8Q9P2G9 620 aaPredicted RBP17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 LRP6O75581 1613 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 PIK3R2O00459 728 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 CREB3O43889 395 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 TLR2O60603 784 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 ODC1P11926 461 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 RPS6KA2Q15349 733 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 CEP85LQ5SZL2 805 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 SLC28A3Q9HAS3 691 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 SH3BP1Q9Y3L3 701 aa17.4■□□□□ 0.38
SMARCA4-201ENST00000344626 PAMP19021 973 aa17.39■□□□□ 0.38
SMARCA4-201ENST00000344626 ACADSBP45954 432 aa17.39■□□□□ 0.38
SMARCA4-201ENST00000344626 UBE2Q2Q8WVN8 375 aa17.39■□□□□ 0.38
SMARCA4-201ENST00000344626 DHX38Q92620 1227 aaKnown RBP17.39■□□□□ 0.38
SMARCA4-201ENST00000344626 AGPAT1Q99943 283 aa17.39■□□□□ 0.38
SMARCA4-201ENST00000344626 LIMA1Q9UHB6 759 aaKnown RBP17.39■□□□□ 0.38
SMARCA4-201ENST00000344626 NALCNQ8IZF0 1738 aa17.39■□□□□ 0.37
SMARCA4-201ENST00000344626 ANGPTL3Q9Y5C1 460 aa17.39■□□□□ 0.37
SMARCA4-201ENST00000344626 ANKRD26Q9UPS8 1709 aa17.39■□□□□ 0.37
SMARCA4-201ENST00000344626 OGTO15294 1046 aa17.39■□□□□ 0.37
SMARCA4-201ENST00000344626 CIB2O75838 187 aa17.39■□□□□ 0.37
SMARCA4-201ENST00000344626 UBA1P22314 1058 aaKnown RBP17.39■□□□□ 0.37
SMARCA4-201ENST00000344626 ASPHQ12797 758 aa17.39■□□□□ 0.37
SMARCA4-201ENST00000344626 ARHGAP15Q53QZ3 475 aa17.39■□□□□ 0.37
SMARCA4-201ENST00000344626 LRP10Q7Z4F1 713 aa17.39■□□□□ 0.37
SMARCA4-201ENST00000344626 IFNL1Q8IU54 200 aa17.39■□□□□ 0.37
SMARCA4-201ENST00000344626 IFT43Q96FT9 208 aa17.39■□□□□ 0.37
SMARCA4-201ENST00000344626 INHAP05111 366 aa17.39■□□□□ 0.37
SMARCA4-201ENST00000344626 IRF1P10914 325 aa17.39■□□□□ 0.37
SMARCA4-201ENST00000344626 PDXDC1Q6P996 788 aa17.39■□□□□ 0.37
SMARCA4-201ENST00000344626 C18orf8Q96DM3 657 aa17.39■□□□□ 0.37
SMARCA4-201ENST00000344626 ADAM2Q99965 735 aa17.39■□□□□ 0.37
SMARCA4-201ENST00000344626 TROVE2P10155 538 aaKnown RBP eCLIP17.39■□□□□ 0.37
SMARCA4-201ENST00000344626 STK4Q13043 487 aa17.39■□□□□ 0.37
SMARCA4-201ENST00000344626 DDX53Q86TM3 631 aaKnown RBP17.39■□□□□ 0.37
SMARCA4-201ENST00000344626 TTC30BQ8N4P2 665 aa17.39■□□□□ 0.37
SMARCA4-201ENST00000344626 PDE11AQ9HCR9 933 aa17.39■□□□□ 0.37
SMARCA4-201ENST00000344626 DBR1Q9UK59 544 aaKnown RBP17.39■□□□□ 0.37
SMARCA4-201ENST00000344626 XRN1Q8IZH2 1706 aaKnown RBP17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 PMLP29590 882 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 SP110Q9HB58 689 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 DYRK4Q9NR20 520 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 IRAK4Q9NWZ3 460 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 OGFRQ9NZT2 677 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 CASTOR2A6NHX0 329 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 CCDC188H7C350 402 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 KLRC2P26717 231 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 SOX10P56693 466 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 AMHR2Q16671 573 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 MPZL3Q6UWV2 235 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 PDIK1LQ8N165 341 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 CFAP57Q96MR6 1250 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 CYP26A1O43174 497 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 RGS7P49802 495 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 RAB27AP51159 221 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 ADCY1Q08828 1119 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 CCDC62Q6P9F0 684 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 SLC51AQ86UW1 340 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 RNF10Q8N5U6 811 aaKnown RBP17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 BHMTQ93088 406 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 CHD2O14647 1828 aaKnown RBP17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 HLA-DRAP01903 254 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 ST8SIA6P61647 398 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 SLMAPQ14BN4 828 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 ANKRD42Q8N9B4 389 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 EPAS1Q99814 870 aa17.38■□□□□ 0.37
SMARCA4-201ENST00000344626 NIF3L1Q9GZT8 377 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms