RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 PCDH11YQ9BZA8 1340 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 BRCA1P38398 1863 aaKnown RBP8.65□□□□□ -1.03
ATG4A-201ENST00000343524 AKAP11Q9UKA4 1901 aa8.65□□□□□ -1.03
ATG4A-201ENST00000343524 A0A1W2PRG0 241 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 EDF1O60869 148 aaKnown RBP8.64□□□□□ -1.03
ATG4A-201ENST00000343524 TBX10O75333 385 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 NOL4O94818 638 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 HAUS5O94927 633 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 CYP1A1P04798 512 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-201ENST00000343524 ZCCHC18P0CG32 403 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 T-ENOLP0DO92 83 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 ALOX15P16050 662 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-201ENST00000343524 MAN1A1P33908 653 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 CAMK2BQ13554 666 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 STAT4Q14765 748 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 SEC23AQ15436 765 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 PDK4Q16654 411 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 KYNUQ16719 465 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 TAF1BQ53T94 588 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-201ENST00000343524 ACSBG2Q5FVE4 666 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 SEL1L2Q5TEA6 688 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 SYDE2Q5VT97 1194 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 SYDE1Q6ZW31 735 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-201ENST00000343524 SV2BQ7L1I2 683 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 NET1Q7Z628 596 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-201ENST00000343524 BLIDQ8IZY5 108 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 KCNH5Q8NCM2 988 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 C10orf82Q8WW14 230 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 TEKT1Q969V4 418 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 ITPKCQ96DU7 683 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 DYDC2Q96IM9 177 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 NLRP3Q96P20 1036 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 FNBP1Q96RU3 617 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 EIF2AQ9BY44 585 aaKnown RBP8.64□□□□□ -1.03
ATG4A-201ENST00000343524 PPCSQ9HAB8 311 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 EPB41L4AQ9HCS5 686 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-201ENST00000343524 TMOD4Q9NZQ9 345 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 WHRNQ9P202 907 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 SAP30BPQ9UHR5 308 aaKnown RBP8.64□□□□□ -1.03
ATG4A-201ENST00000343524 DMTF1Q9Y222 760 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 NR2E3Q9Y5X4 410 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 V9GY48 417 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-201ENST00000343524 DUOX1Q9NRD9 1551 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 TCRBV5S4A2TA0A5A2 114 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 TMEM110-MUSTN1A8MSY1 372 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 PRPF4O43172 522 aaKnown RBP eCLIP8.64□□□□□ -1.03
ATG4A-201ENST00000343524 AP1G1O43747 822 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 MAGEC1O60732 1142 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 SUPT3HO75486 399 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 PRDM1O75626 825 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 FCER1AP12319 257 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 ALAS1P13196 640 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 ADORA1P30542 326 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 CCNFP41002 786 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 PTGIRP43119 386 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 MCAMP43121 646 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 RPL21P46778 160 aaKnown RBP8.64□□□□□ -1.03
ATG4A-201ENST00000343524 RAP1GDS1P52306 607 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 GSTM4Q03013 218 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 SCARF1Q14162 830 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 KRT72Q14CN4 511 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 PFKFB3Q16875 520 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-201ENST00000343524 LONRF1Q17RB8 773 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 IFIT1BQ5T764 474 aaKnown RBP8.64□□□□□ -1.03
ATG4A-201ENST00000343524 AAGABQ6PD74 315 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 EPM2AIP1Q7L775 607 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-201ENST00000343524 OTUD6AQ7L8S5 288 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 NLRP9Q7RTR0 991 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 LRP10Q7Z4F1 713 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 CLNKQ7Z7G1 428 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 TMEM110Q86TL2 294 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 TTC5Q8N0Z6 440 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 CMTR1Q8N1G2 835 aaKnown RBP8.64□□□□□ -1.03
ATG4A-201ENST00000343524 MORC4Q8TE76 937 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 DQX1Q8TE96 717 aaKnown RBP8.64□□□□□ -1.03
ATG4A-201ENST00000343524 SHISA4Q96DD7 197 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 VPS50Q96JG6 964 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 DCAF5Q96JK2 942 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 SIKE1Q9BRV8 207 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 POLR3CQ9BUI4 534 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-201ENST00000343524 CADM1Q9BY67 442 aaKnown RBP8.64□□□□□ -1.03
ATG4A-201ENST00000343524 GANQ9H2C0 597 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 CDC42EP4Q9H3Q1 356 aaKnown RBP8.64□□□□□ -1.03
ATG4A-201ENST00000343524 KRT82Q9NSB4 513 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 NENFQ9UMX5 172 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 FLT1P17948 1338 aa8.64□□□□□ -1.03
ATG4A-201ENST00000343524 SBF1O95248 1867 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 TOGARAM1Q9Y4F4 1720 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 MATN2O00339 956 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 HGSO14964 777 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-201ENST00000343524 GSC2O15499 205 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 EXOC3O60645 756 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 PDE5AO76074 875 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 RGS20O76081 388 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 TMEM253P0C7T8 217 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 ETS2P15036 469 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 DPEP1P16444 411 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 TATP17735 454 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-201ENST00000343524 LMNB1P20700 586 aa8.63□□□□□ -1.03
ATG4A-201ENST00000343524 CTNNA2P26232 953 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms