RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 TMEM174Q8WUU8 243 aa10.3□□□□□ -0.76
HOXA1-201ENST00000343060 C1orf54Q8WWF1 131 aa10.3□□□□□ -0.76
HOXA1-201ENST00000343060 UIMC1Q96RL1 719 aa10.3□□□□□ -0.76
HOXA1-201ENST00000343060 NUP85Q9BW27 656 aa10.3□□□□□ -0.76
HOXA1-201ENST00000343060 CHST7Q9NS84 486 aa10.3□□□□□ -0.76
HOXA1-201ENST00000343060 SENP1Q9P0U3 644 aa10.3□□□□□ -0.76
HOXA1-201ENST00000343060 ANAPC5Q9UJX4 755 aa10.3□□□□□ -0.76
HOXA1-201ENST00000343060 PDLIM1O00151 329 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 MEIS2O14770 477 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 FAM13AO94988 1023 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 CBX6O95503 412 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 CENPCQ03188 943 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 CCDC125Q86Z20 511 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 ARHGEF19Q8IW93 802 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 UCMAQ8WVF2 138 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 SPOCK2Q92563 424 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 AZIN2Q96A70 460 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 P2RX7Q99572 595 aaKnown RBP10.29□□□□□ -0.76
HOXA1-201ENST00000343060 STRA6Q9BX79 667 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 FAM192AQ9GZU8 254 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 SLCO1B3Q9NPD5 702 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 SCOCQ9UIL1 159 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 GRID1Q9ULK0 1009 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 PLSCR1O15162 318 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 PMM2O15305 246 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 ATMINO43313 823 aaPredicted RBP10.29□□□□□ -0.76
HOXA1-201ENST00000343060 RNF8O76064 485 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 SREBF1P36956 1147 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 TMED2Q15363 201 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 CCDC142Q17RM4 750 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 ZC2HC1CQ53FD0 456 aaPredicted RBP10.29□□□□□ -0.76
HOXA1-201ENST00000343060 PRR16Q569H4 304 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 ZNF449Q6P9G9 518 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 ZNF720Q7Z2F6 126 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 NOP9Q86U38 636 aaKnown RBP10.29□□□□□ -0.76
HOXA1-201ENST00000343060 FAM71AQ8IYT1 594 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 PHC3Q8NDX5 983 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 GATA6Q92908 595 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 EIF2AK1Q9BQI3 630 aaKnown RBP10.29□□□□□ -0.76
HOXA1-201ENST00000343060 GORASP1Q9BQQ3 440 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 CCDC28BQ9BUN5 200 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 PARVGQ9HBI0 331 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 RGL1Q9NZL6 768 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 TBK1Q9UHD2 729 aa10.29□□□□□ -0.76
HOXA1-201ENST00000343060 H0Y3Z8 333 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 EXOC3O60645 756 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 SKIP12755 728 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 MCCD1P59942 119 aaPredicted RBP10.28□□□□□ -0.76
HOXA1-201ENST00000343060 FMO1Q01740 532 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 CDR2Q01850 454 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 GSTA3Q16772 222 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 QRICH1Q2TAL8 776 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 KHDC1Q4VXA5 237 aaKnown RBP10.28□□□□□ -0.76
HOXA1-201ENST00000343060 ZNF746Q6NUN9 644 aaPredicted RBP10.28□□□□□ -0.76
HOXA1-201ENST00000343060 DPP8Q6V1X1 898 aaPredicted RBP10.28□□□□□ -0.76
HOXA1-201ENST00000343060 STXBP4Q6ZWJ1 553 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.28□□□□□ -0.76
HOXA1-201ENST00000343060 NLRP9Q7RTR0 991 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 CLNKQ7Z7G1 428 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 CLEC10AQ8IUN9 316 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 ZCCHC9Q8N567 271 aaKnown RBP10.28□□□□□ -0.76
HOXA1-201ENST00000343060 ATL2Q8NHH9 583 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 NRG4Q8WWG1 115 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 FAM210AQ96ND0 272 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 CADM1Q9BY67 442 aaKnown RBP10.28□□□□□ -0.76
HOXA1-201ENST00000343060 TRIM4Q9C037 500 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 PPCSQ9HAB8 311 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 SSU72Q9NP77 194 aaKnown RBP10.28□□□□□ -0.76
HOXA1-201ENST00000343060 UBE2TQ9NPD8 197 aaPredicted RBP10.28□□□□□ -0.76
HOXA1-201ENST00000343060 DNAJC17Q9NVM6 304 aaKnown RBP10.28□□□□□ -0.76
HOXA1-201ENST00000343060 ZFP69BQ9UJL9 534 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.28□□□□□ -0.76
HOXA1-201ENST00000343060 MSH4O15457 936 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 TYROBPO43914 113 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 TJP3O95049 919 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 ZWINTO95229 277 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 RRM1P23921 792 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 ADSSP30520 456 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 SLC16A2P36021 539 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 CYP2J2P51589 502 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 KLF1Q13351 362 aaPredicted RBP10.28□□□□□ -0.76
HOXA1-201ENST00000343060 GRIPAP1Q4V328 841 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 TAF1BQ53T94 588 aaPredicted RBP10.28□□□□□ -0.76
HOXA1-201ENST00000343060 RNF220Q5VTB9 566 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 SNX30Q5VWJ9 437 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 RFWD3Q6PCD5 774 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 OTOAQ7RTW8 1153 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 MYCT1Q8N699 235 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 NCSTNQ92542 709 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 ITFG2Q969R8 447 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 ZNF653Q96CK0 615 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 PTCD3Q96EY7 689 aaKnown RBP10.28□□□□□ -0.76
HOXA1-201ENST00000343060 BTBD6Q96KE9 485 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 HERPUD2Q9BSE4 406 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 MMADHCQ9H3L0 296 aaPredicted RBP10.28□□□□□ -0.76
HOXA1-201ENST00000343060 TRABDQ9H4I3 376 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 KIAA1586Q9HCI6 787 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 TUFT1Q9NNX1 390 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 LRRC4BQ9NT99 713 aa10.28□□□□□ -0.76
HOXA1-201ENST00000343060 PDP2Q9P2J9 529 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms